Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g068410.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 3.1e-41 171.4 88 100.0
Sopen02g028840 Solanum pennellii HOM05D007931 ORTHO05D010331 8.2e-26 120.2 73 80.8
Nitab4.5_0005181g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.5e-21 104.8 74 68.9
Nitab4.5_0008257g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.8e-20 102.4 76 68.4
Nitab4.5_0008942g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.7e-20 100.5 72 70.8
Nitab4.5_0001840g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.4e-19 97.1 74 67.6
Nitab4.5_0002433g0100 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.6e-18 95.9 74 63.5
PGSC0003DMG400030025 Solanum tuberosum HOM05D007931 ORTHO05D010331 2.8e-18 95.1 74 63.5
Nitab4.5_0013264g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.8e-18 94.4 74 63.5
Nitab4.5_0007096g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.1e-17 93.2 68 67.6
Nitab4.5_0000265g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.1e-17 91.7 76 59.2
Nitab4.5_0003063g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.1e-17 91.7 74 63.5
Nitab4.5_0004512g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.1e-17 91.7 74 63.5
Nitab4.5_0003766g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.1e-17 91.3 64 68.8
PGSC0003DMG400040885 Solanum tuberosum HOM05D007931 ORTHO05D010331 2.0e-16 89.0 60 73.3
Nitab4.5_0002837g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.9e-16 87.4 74 60.8
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.7e-16 87.0 74 62.2
Sopen10g023470 Solanum pennellii HOM05D007931 ORTHO05D010331 7.7e-16 87.0 74 58.1
Nitab4.5_0003161g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.0e-15 84.3 74 52.7
Nitab4.5_0002199g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 8.5e-15 83.6 74 51.4
Solyc02g084031.1 Solanum lycopersicum HOM05D007931 ORTHO05D000006 1.4e-14 82.8 66 63.6
Nitab4.5_0001005g0120 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.2e-14 81.3 62 64.5
Nitab4.5_0000075g0220 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.5e-14 80.9 74 56.8
Solyc08g067650.2 Solanum lycopersicum HOM05D007931 ORTHO05D010331 5.5e-14 80.9 68 60.3
Sopen02g012250 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-14 80.9 55 70.9
Nitab4.5_0001297g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.9e-13 77.0 64 60.9
PGSC0003DMG400030140 Solanum tuberosum HOM05D007931 ORTHO05D010331 7.9e-13 77.0 60 60.0
Nitab4.5_0000128g0350 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.0e-11 72.4 83 45.8
Nitab4.5_0003727g0050 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.3e-10 69.7 50 66.0
Sopen08g021590 Solanum pennellii HOM05D007931 ORTHO05D010331 3.7e-10 68.2 74 50.0
PGSC0003DMG400014334 Solanum tuberosum HOM05D007931 ORTHO05D010331 3.7e-10 68.2 70 48.6
Nitab4.5_0010531g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.8e-10 67.8 68 55.9
Nitab4.5_0000016g0590 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.1e-09 66.6 64 53.1
Peaxi162Scf00457g00055 Petunia axillaris HOM05D007931 ORTHO05D010331 3.1e-09 65.1 59 52.5
Solyc04g010150.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 5.3e-09 64.3 63 52.4
Nitab4.5_0005933g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.9e-09 63.9 57 57.9
Nitab4.5_0001238g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.1e-09 63.5 71 50.7
Nitab4.5_0000871g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.0e-08 62.4 74 51.4
Solyc02g032630.2 Solanum lycopersicum HOM05D007931 ORTHO05D010331 2.0e-08 62.4 78 46.2
Solyc04g063330.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 2.6e-08 62.0 56 50.0
Nitab4.5_0000055g0280 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.7e-08 60.5 53 58.5
Nitab4.5_0000132g0210 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.7e-08 60.5 53 52.8
Nitab4.5_0000780g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.3e-07 59.7 64 48.4
Nitab4.5_0006590g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.7e-07 59.3 83 38.6
Sopen11g020420 Solanum pennellii HOM05D004800 ORTHO05D010331 6.5e-07 57.4 74 41.9
Nitab4.5_0000760g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.4e-06 56.2 65 35.4
Nitab4.5_0002082g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.4e-06 56.2 75 33.3
Nitab4.5_0003244g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.4e-06 56.2 60 38.3
Nitab4.5_0005292g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.9e-06 55.8 60 51.7
Nitab4.5_0002239g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.2e-06 55.1 74 36.5
Nitab4.5_0003434g0110 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.2e-06 55.1 74 33.8


User provided reference genes

Program Settings