Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g065205.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 6.4e-85 317.4 163 100.0
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-28 129.4 67 82.1
Solyc04g150154.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 2.1e-27 126.3 68 85.3
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 8.9e-26 120.9 69 75.4
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.5e-25 117.9 66 81.8
Nitab4.5_0001346g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.8e-25 117.5 67 74.6
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 1.4e-23 113.6 69 73.9
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 1.8e-23 113.2 69 72.5
Nitab4.5_0000285g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.2e-23 112.5 68 72.1
Nitab4.5_0008635g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.2e-23 112.5 71 69.0
Nitab4.5_0001199g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.2e-23 110.9 67 73.1
Nitab4.5_0010441g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.5e-22 109.0 67 68.7
Nitab4.5_0002394g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.9e-22 108.2 67 68.7
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.9e-22 108.2 67 70.1
Nitab4.5_0005139g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.9e-22 108.2 67 68.7
Nitab4.5_0000188g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.8e-22 107.8 67 70.1
Nitab4.5_0003520g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-21 107.1 67 70.1
Nitab4.5_0012715g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-21 105.9 67 70.1
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-21 105.9 67 67.2
Nitab4.5_0000024g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.0e-21 105.1 73 63.0
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.0e-21 105.1 67 68.7
Nitab4.5_0003970g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.6e-21 104.8 68 69.1
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.6e-21 104.4 66 68.2
Nitab4.5_0002530g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.6e-21 104.4 70 65.7
Nitab4.5_0004285g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-20 103.6 67 65.7
Nitab4.5_0003082g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-20 102.8 67 67.2
Nitab4.5_0016483g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-20 102.8 66 66.7
Nitab4.5_0010582g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.3e-20 102.4 68 66.2
Nitab4.5_0004891g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.6e-20 101.7 67 68.7
Peaxi162Scf00050g00139 Petunia axillaris HOM05D001309 ORTHO05D000385 4.7e-19 98.6 68 58.8
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-18 97.1 66 66.7
Nitab4.5_0000009g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.9e-18 94.4 65 64.6
Nitab4.5_0000769g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-16 90.5 59 67.8
Nitab4.5_0001481g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-16 89.4 59 67.8
Nitab4.5_0000524g0110 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-15 87.4 55 70.9
Nitab4.5_0008766g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-14 83.2 67 58.2
Nitab4.5_0001313g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.0e-14 81.6 67 58.2
Nitab4.5_0000039g0160 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-13 80.1 53 64.2
Nitab4.5_0001128g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.6e-13 78.2 53 67.9
Cpa.g.c35072.1 Carica papaya HOM05D001309 ORTHO05D000385 1.5e-12 77.0 69 46.4
Nitab4.5_0002459g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.3e-12 75.5 45 71.1
Nitab4.5_0005861g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.5e-12 74.3 73 50.7
Nitab4.5_0014949g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.5e-12 74.3 44 68.2
Nitab4.5_0004210g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.8e-11 72.8 53 66.0
Nitab4.5_0000522g0140 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.0e-11 71.2 36 86.1
Nn7g36848 Nelumbo nucifera HOM05D001309 ORTHO05D000385 6.8e-10 68.2 65 50.8
Nitab4.5_0003703g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.8e-10 68.2 66 53.0
ClCG06G005780 Citrullus lanatus HOM05D001309 ORTHO05D000385 1.2e-09 67.4 63 41.3
ClCG08G004830 Citrullus lanatus HOM05D001309 ORTHO05D000385 2.6e-09 66.2 65 40.0
Nn5g26984 Nelumbo nucifera HOM05D001309 ORTHO05D000385 4.4e-09 65.5 65 49.2
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 4.4e-09 65.5 123 30.9
Nitab4.5_0000898g0150 Nicotiana tabacum HOM05D001309 ORTHO05D009935 7.5e-09 64.7 32 84.4
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.3e-08 63.9 64 45.3
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 1.3e-08 63.9 64 45.3
Nitab4.5_0000423g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-08 63.9 35 74.3
Nitab4.5_0000580g0310 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-08 63.5 32 81.2
COL.COLO4_08701 Corchorus olitorius HOM05D001309 ORTHO05D000385 2.2e-08 63.2 88 33.0
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 2.2e-08 63.2 68 41.2
EL10Ac1g01843 Beta vulgaris HOM05D009343 ORTHO05D011970 4.9e-08 62.0 69 39.1
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 6.4e-08 61.6 67 40.3
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 6.4e-08 61.6 64 45.3
Manes.16G033751 Manihot esculenta HOM05D001309 ORTHO05D000385 6.4e-08 61.6 68 42.6
Nitab4.5_0001903g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.4e-08 61.6 38 65.8
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 8.3e-08 61.2 64 43.8
Os02g0129000 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 8.3e-08 61.2 59 44.1
Os07g0212400 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 8.3e-08 61.2 59 44.1
Os08g0367300 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 8.3e-08 61.2 59 44.1
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 1.1e-07 60.8 64 45.3
Zm00001eb182790 Zea mays HOM05D008576 ORTHO05D000385 1.4e-07 60.5 133 28.6
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 1.9e-07 60.1 64 42.2
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-07 60.1 71 32.4
Sc08g0005020 Simmondsia chinensis HOM05D004066 ORTHO05D004434 1.9e-07 60.1 80 45.0
Zm00001eb234630 Zea mays HOM05D008576 ORTHO05D000385 1.9e-07 60.1 133 28.6
Zm00001eb308920 Zea mays HOM05D008576 ORTHO05D000385 1.9e-07 60.1 67 40.3
Zm00001eb388400 Zea mays HOM05D008576 ORTHO05D000385 1.9e-07 60.1 67 40.3
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 2.4e-07 59.7 67 38.8
COL.COLO4_36623 Corchorus olitorius HOM05D001309 ORTHO05D000385 2.4e-07 59.7 82 34.1
Zm00001eb027370 Zea mays HOM05D008576 ORTHO05D000385 2.4e-07 59.7 133 28.6
Zm00001eb029070 Zea mays HOM05D008576 ORTHO05D000385 2.4e-07 59.7 133 28.6
Zm00001eb093010 Zea mays HOM05D008576 ORTHO05D000385 2.4e-07 59.7 133 28.6
Zm00001eb184880 Zea mays HOM05D008576 ORTHO05D000385 2.4e-07 59.7 133 28.6
Zm00001eb190070 Zea mays HOM05D008576 ORTHO05D000385 2.4e-07 59.7 133 28.6
Zm00001eb384730 Zea mays HOM05D008576 ORTHO05D000385 2.4e-07 59.7 133 28.6
Zm00001eb425380 Zea mays HOM05D008576 ORTHO05D000385 2.4e-07 59.7 133 28.6
Zm00001eb438630 Zea mays HOM05D008576 ORTHO05D000385 2.4e-07 59.7 133 28.6
Zm00001eb439020 Zea mays HOM05D008576 ORTHO05D000385 2.4e-07 59.7 133 28.6
Zm00001eb390290 Zea mays HOM05D008576 ORTHO05D000385 3.2e-07 59.3 133 27.8
Nitab4.5_0000721g0230 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.1e-07 58.9 66 43.9
TPR.G13785 Trifolium pratense HOM05D004615 ORTHO05D000385 4.1e-07 58.9 66 39.4
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 5.4e-07 58.5 67 37.3
AUR62041672 Chenopodium quinoa HOM05D001309 ORTHO05D000385 5.4e-07 58.5 68 35.3
MBI09_g41430_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.4e-07 58.5 69 33.3
Zm00001eb333630 Zea mays HOM05D008576 ORTHO05D000385 5.4e-07 58.5 133 28.6
DCAR_001756 Daucus carota HOM05D001309 ORTHO05D000385 7.1e-07 58.2 66 40.9
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 7.1e-07 58.2 62 40.3
Zm00001eb092990 Zea mays HOM05D008576 ORTHO05D000385 7.1e-07 58.2 149 27.5
EL10Ac6g15567 Beta vulgaris HOM05D000107 ORTHO05D000568 9.2e-07 57.8 68 38.2
TWI31G0781 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 9.2e-07 57.8 66 39.4
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.2e-06 57.4 75 33.3
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 1.2e-06 57.4 65 38.5
Nitab4.5_0006718g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-06 57.4 34 67.6
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 1.2e-06 57.4 84 36.9
Zm00001eb181280 Zea mays HOM05D008576 ORTHO05D000385 1.2e-06 57.4 83 33.7
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 1.6e-06 57.0 75 32.0
MBI18_g39412_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-06 57.0 71 31.0
Nitab4.5_0006915g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.6e-06 57.0 32 78.1
Dinv12401 Davidia involucrata HOM05D010146 ORTHO05D000385 2.1e-06 56.6 65 35.4
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 2.1e-06 56.6 65 41.5
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 2.1e-06 56.6 66 36.4
Hund24609 Selenicereus undatus HOM05D001385 ORTHO05D008760 2.1e-06 56.6 74 39.2
Sc06g0003990 Simmondsia chinensis HOM05D004615 ORTHO05D000385 2.1e-06 56.6 85 32.9
MBI03_g15598_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.7e-06 56.2 69 37.7
Nitab4.5_0002263g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.7e-06 56.2 35 65.7
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 2.7e-06 56.2 66 36.4
Hund20142 Selenicereus undatus HOM05D001385 ORTHO05D008760 2.7e-06 56.2 75 40.0
Sc03g0005810 Simmondsia chinensis HOM05D010674 ORTHO05D012685 3.5e-06 55.8 69 40.6
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 4.6e-06 55.5 66 34.8
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 6.0e-06 55.1 67 35.8
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.0e-06 55.1 67 37.3
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 6.0e-06 55.1 69 34.8
MBI17_g16204_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.0e-06 55.1 57 38.6
Prupe.1G266100 Prunus persica HOM05D005012 ORTHO05D000385 6.0e-06 55.1 48 43.8
Prupe.2G006600 Prunus persica HOM05D005012 ORTHO05D000385 6.0e-06 55.1 48 43.8
Sopen04g025420 Solanum pennellii HOM05D001309 ORTHO05D000385 6.0e-06 55.1 67 44.8
EL10Ac5g11722 Beta vulgaris HOM05D000107 ORTHO05D000062 7.8e-06 54.7 65 36.9
Dinv12592 Davidia involucrata HOM05D010146 ORTHO05D000385 7.8e-06 54.7 63 34.9
Dinv15672 Davidia involucrata HOM05D010146 ORTHO05D000385 7.8e-06 54.7 63 34.9
Gohir.D04G003250 Gossypium hirsutum HOM05D001309 ORTHO05D000385 7.8e-06 54.7 67 35.8
Nitab4.5_0008994g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.8e-06 54.7 44 61.4
Sc07g0004450 Simmondsia chinensis HOM05D010414 ORTHO05D000385 7.8e-06 54.7 88 31.8
Sc19g0006190 Simmondsia chinensis HOM05D010414 ORTHO05D000385 7.8e-06 54.7 70 37.1
Zm00001eb267220 Zea mays HOM05D008576 ORTHO05D000385 7.8e-06 54.7 67 32.8


User provided reference genes

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