Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g063600.3 Solanum lycopersicum HOM05D008163 ORTHO05D010305 1.8e-69 265.8 135 100.0
Hma1.2p1_0136F.1_g062003 Hydrangea macrophylla HOM05D008163 ORTHO05D010305 4.0e-56 221.5 132 87.1
SalBow1G5351 Salvia bowleyana HOM05D008163 ORTHO05D010305 2.4e-45 185.7 113 85.8
SalBow1G7817 Salvia bowleyana HOM05D008163 ORTHO05D010305 2.4e-45 185.7 113 85.8
Nn1g09991 Nelumbo nucifera HOM05D008163 ORTHO05D010305 2.8e-41 172.2 98 88.8
Nn1g10091 Nelumbo nucifera HOM05D008163 ORTHO05D010305 2.8e-41 172.2 98 88.8
Lalb_Chr00c21g0405831 Lupinus albus HOM05D008163 ORTHO05D010305 4.4e-39 164.9 98 86.7
Nitab4.5_0001127g0310 Nicotiana tabacum HOM05D008163 ORTHO05D010305 3.8e-38 161.8 91 86.8
Nitab4.5_0000592g0150 Nicotiana tabacum HOM05D008163 ORTHO05D010305 4.9e-38 161.4 89 88.8
Nitab4.5_0000161g0030 Nicotiana tabacum HOM05D008163 ORTHO05D010305 2.4e-37 159.1 96 82.3
TPR.G20554 Trifolium pratense HOM05D008163 ORTHO05D010305 1.0e-35 153.7 95 82.1
MD15G1374400 Malus domestica HOM05D008163 ORTHO05D010305 2.3e-35 152.5 118 68.6
Nitab4.5_0000172g1360 Nicotiana tabacum HOM05D008163 ORTHO05D010305 6.6e-35 151.0 80 91.2
MD12G1044600 Malus domestica HOM05D008163 ORTHO05D010305 7.3e-34 147.5 107 72.9
Prupe.7G030100 Prunus persica HOM05D008163 ORTHO05D010305 7.3e-34 147.5 108 72.2
Prupe.4G282300 Prunus persica HOM05D008163 ORTHO05D010305 2.1e-33 146.0 108 72.2
Sabra07G0061500 Salix brachista HOM05D008163 ORTHO05D010305 3.1e-32 142.1 118 64.4
Potri.007G072900 Populus trichocarpa HOM05D008163 ORTHO05D010305 5.2e-32 141.4 118 64.4
Sabra15G0022500 Salix brachista HOM05D008163 ORTHO05D010305 5.2e-32 141.4 118 63.6
Glyma.17G185500 Glycine max HOM05D008163 ORTHO05D010305 8.4e-30 134.0 83 81.9
Carub.0003s2247 Capsella rubella HOM05D008163 ORTHO05D010305 7.1e-29 131.0 124 56.5
AL3G36570 Arabidopsis lyrata HOM05D008163 ORTHO05D010305 6.0e-28 127.9 120 57.5
CARHR098200 Cardamine hirsuta HOM05D008163 ORTHO05D010305 6.0e-28 127.9 120 58.3
Nitab4.5_0001702g0010 Nicotiana tabacum HOM05D011509 ORTHO05D010305 2.3e-27 125.9 67 88.1
Aa31LG8G8870 Aethionema arabicum HOM05D008163 ORTHO05D010305 3.0e-27 125.6 108 59.3
AT3G22300 Arabidopsis thaliana HOM05D008163 ORTHO05D010305 6.6e-27 124.4 120 56.7
HanXRQChr07g0196921 Helianthus annuus HOM05D003855 ORTHO05D004722 6.6e-27 124.4 126 57.9
Thhalv10021368m.g Eutrema salsugineum HOM05D008163 ORTHO05D010305 1.1e-26 123.6 109 58.7
A03p42710 Brassica napus HOM05D008163 ORTHO05D010305 3.3e-26 122.1 110 58.2
BraA03t13418Z Brassica rapa HOM05D008163 ORTHO05D010305 4.3e-26 121.7 110 57.3
FAN03G0237 Fragaria x ananassa HOM05D008163 ORTHO05D010305 4.3e-26 121.7 114 59.6
Manes.09G036100 Manihot esculenta HOM05D008163 ORTHO05D010305 4.3e-26 121.7 94 70.2
Sp3g20090 Schrenkiella parvula HOM05D008163 ORTHO05D010305 4.3e-26 121.7 109 58.7
RcHm_v2.0_Chr1g0321141 Rosa chinensis HOM05D008163 ORTHO05D010305 5.6e-26 121.3 112 61.6
BcaC01g03452 Brassica carinata HOM05D008163 ORTHO05D010305 9.6e-26 120.6 110 57.3
C03p52430 Brassica napus HOM05D008163 ORTHO05D010305 9.6e-26 120.6 110 57.3
BolC3t17513H Brassica oleracea HOM05D008163 ORTHO05D010305 9.6e-26 120.6 110 57.3
FAN06G4466 Fragaria x ananassa HOM05D008163 ORTHO05D010305 1.3e-25 120.2 112 59.8
BcaB06g26334 Brassica carinata HOM05D008163 ORTHO05D010305 2.8e-25 119.0 109 57.8
A05p26470 Brassica napus HOM05D008163 ORTHO05D010305 2.8e-25 119.0 108 58.3
BraA05t21520Z Brassica rapa HOM05D008163 ORTHO05D010305 2.8e-25 119.0 108 58.3
SHI03043 Sapria himalayana HOM05D008163 ORTHO05D010305 2.8e-25 119.0 110 56.4
FvH4_7g02510 Fragaria vesca HOM05D008163 ORTHO05D010305 4.8e-25 118.2 112 58.9
ECA238G1787 Erigeron canadensis HOM05D003855 ORTHO05D004722 6.2e-25 117.9 118 55.9
BcaC05g28083 Brassica carinata HOM05D008163 ORTHO05D010305 1.1e-24 117.1 108 57.4
C05p41060 Brassica napus HOM05D008163 ORTHO05D010305 1.1e-24 117.1 108 57.4
BolC5t32848H Brassica oleracea HOM05D008163 ORTHO05D010305 1.1e-24 117.1 108 57.4
Actinidia29350 Actinidia chinensis HOM05D008163 ORTHO05D010305 4.0e-24 115.2 92 67.4
RcHm_v2.0_Chr2g0149911 Rosa chinensis HOM05D008163 ORTHO05D010305 1.2e-23 113.6 112 59.8
Hund21444 Selenicereus undatus HOM05D008163 ORTHO05D010305 3.4e-23 112.1 113 58.4
AUR62012772 Chenopodium quinoa HOM05D008163 ORTHO05D010305 1.1e-21 107.1 101 61.4
Os12g0517200 Oryza sativa ssp. japonica HOM05D008163 ORTHO05D010305 1.1e-21 107.1 107 59.8
AUR62021886 Chenopodium quinoa HOM05D008163 ORTHO05D010305 1.4e-21 106.7 101 60.4
Zm00001eb215210 Zea mays HOM05D008163 ORTHO05D010305 4.2e-21 105.1 104 56.7
EL10Ac8g20156 Beta vulgaris HOM05D008163 ORTHO05D010305 5.4e-21 104.8 82 65.9
Zm00001eb056700 Zea mays HOM05D008163 ORTHO05D010305 9.3e-21 104.0 106 56.6
CSS0033547 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 4.6e-20 101.7 89 62.9
DCAR_027582 Daucus carota HOM05D008163 ORTHO05D010305 6.0e-20 101.3 107 51.4
AUR62036216 Chenopodium quinoa HOM05D008163 ORTHO05D010305 2.3e-19 99.4 101 57.4
CSS0047821 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 3.0e-19 99.0 89 61.8
Rhsim06G0223600 Rhododendron simsii HOM05D000504 ORTHO05D000403 2.5e-18 95.9 77 67.5
Prupe.7G029400 Prunus persica HOM05D008163 ORTHO05D010305 3.3e-18 95.5 74 70.3
SEGI_07019 Sequoiadendron giganteum HOM05D008163 ORTHO05D010305 4.8e-17 91.7 114 44.7
Ah.14g087810 Amaranthus hybridus HOM05D000967 ORTHO05D000796 1.2e-15 87.0 101 47.5
MD07G1062900 Malus domestica HOM05D008163 ORTHO05D010305 7.6e-15 84.3 55 72.7
Nitab4.5_0004300g0280 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.2e-14 82.8 64 68.8
PSO017G7110 Papaver somniferum HOM05D008163 ORTHO05D010305 5.5e-13 78.2 80 53.8
PSO170G4613 Papaver somniferum HOM05D008163 ORTHO05D010305 5.5e-13 78.2 80 53.8
Pp3c3_3090 Physcomitrium patens HOM05D008163 ORTHO05D010305 3.5e-12 75.5 106 40.6
AagrBONN_evm.TU.Sc2ySwM_368.972 Anthoceros agrestis HOM05D008163 ORTHO05D010305 1.3e-11 73.6 105 41.9
Nitab4.5_0000592g0200 Nicotiana tabacum HOM05D012916 ORTHO05D014365 5.8e-07 58.2 41 75.6
SMO196G0141 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 3.8e-06 55.5 76 46.1
SMO234G0032 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 3.8e-06 55.5 76 46.1


User provided reference genes

Program Settings