Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g063440.3 Solanum lycopersicum HOM05D007792 ORTHO05D009931 3.2e-47 191.4 98 100.0
Solyc11g063720.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 3.5e-46 188.0 98 98.0
Solyc11g063660.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 3.0e-45 184.9 98 95.9
Solyc00g180440.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 1.8e-34 149.1 84 91.7
Oeu028775.1 Olea europaea HOM05D007792 ORTHO05D009931 3.1e-34 148.3 86 88.4
Oeu058366.1 Olea europaea HOM05D007792 ORTHO05D009931 3.1e-34 148.3 86 88.4
Oeu053978.1 Olea europaea HOM05D007792 ORTHO05D009931 1.5e-33 146.0 86 87.2
Gohir.D01G101995 Gossypium hirsutum HOM05D007792 ORTHO05D009931 2.2e-32 142.1 86 86.0
SalBow1G1024 Salvia bowleyana HOM05D007792 ORTHO05D009931 2.2e-32 142.1 86 84.9
PGR111G0084 Punica granatum HOM05D007792 ORTHO05D009931 6.5e-32 140.6 86 83.7
Gohir.A12G229400 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.1e-31 139.8 86 83.7
PSO548G0123 Papaver somniferum HOM05D007792 ORTHO05D009931 1.9e-31 139.0 86 82.6
CAN.G1148.9 Capsicum annuum HOM05D007792 ORTHO05D009931 4.2e-31 137.9 87 82.8
CAN.G2018.13 Capsicum annuum HOM05D007792 ORTHO05D009931 4.2e-31 137.9 87 82.8
CAN.G438.83 Capsicum annuum HOM05D007792 ORTHO05D009931 4.2e-31 137.9 87 82.8
Nn021s41529 Nelumbo nucifera HOM05D007792 ORTHO05D009931 4.2e-31 137.9 89 82.0
Nn6g32081 Nelumbo nucifera HOM05D007792 ORTHO05D009931 4.2e-31 137.9 89 82.0
HanXRQChr01g0020291 Helianthus annuus HOM05D007792 ORTHO05D009931 5.5e-31 137.5 86 82.6
HanXRQChr04g0094291 Helianthus annuus HOM05D007792 ORTHO05D009931 5.5e-31 137.5 86 82.6
HanXRQChr04g0095111 Helianthus annuus HOM05D007792 ORTHO05D009931 5.5e-31 137.5 86 82.6
HanXRQChr10g0283611 Helianthus annuus HOM05D007792 ORTHO05D009931 5.5e-31 137.5 86 82.6
HanXRQChr10g0284301 Helianthus annuus HOM05D007792 ORTHO05D009931 5.5e-31 137.5 86 82.6
HanXRQChr10g0318141 Helianthus annuus HOM05D007792 ORTHO05D009931 5.5e-31 137.5 86 82.6
HanXRQChr11g0326891 Helianthus annuus HOM05D007792 ORTHO05D009931 5.5e-31 137.5 86 82.6
HanXRQCPg0580101 Helianthus annuus HOM05D007792 ORTHO05D009931 5.5e-31 137.5 86 82.6
RcHm_v2.0_CPg0502001 Rosa chinensis HOM05D007792 ORTHO05D009931 5.5e-31 137.5 86 82.6
AL2G21630 Arabidopsis lyrata HOM05D007792 ORTHO05D009931 9.4e-31 136.7 86 80.2
ATCG00660 Arabidopsis thaliana HOM05D007792 ORTHO05D009931 9.4e-31 136.7 86 80.2
CARHR282170 Cardamine hirsuta HOM05D007792 ORTHO05D009931 9.4e-31 136.7 86 80.2
DCAR_032507 Daucus carota HOM05D007792 ORTHO05D009931 1.2e-30 136.3 86 82.6
HanXRQChr02g0052571 Helianthus annuus HOM05D007792 ORTHO05D009931 6.7e-29 130.6 86 79.1
BNapus_Darmor_BZH_scaffold_287p00200 Brassica napus HOM05D007792 ORTHO05D009931 2.0e-28 129.0 86 76.7
C02p43590 Brassica napus HOM05D007792 ORTHO05D009931 2.0e-28 129.0 86 76.7
C06p22950 Brassica napus HOM05D007792 ORTHO05D009931 2.0e-28 129.0 86 76.7
BolSC29t60477H Brassica oleracea HOM05D007792 ORTHO05D009931 2.0e-28 129.0 86 76.7
BolSC29t60598H Brassica oleracea HOM05D007792 ORTHO05D009931 2.0e-28 129.0 86 76.7
BolSC47t61086H Brassica oleracea HOM05D007792 ORTHO05D009931 2.0e-28 129.0 86 76.7
BraSC138t45565Z Brassica rapa HOM05D007792 ORTHO05D009931 2.0e-28 129.0 86 76.7
BraSC25t45855Z Brassica rapa HOM05D007792 ORTHO05D009931 2.0e-28 129.0 86 76.7
BraSC58t46432Z Brassica rapa HOM05D007792 ORTHO05D009931 2.0e-28 129.0 86 76.7
Sed0026344 Sechium edule HOM05D007792 ORTHO05D009931 2.6e-28 128.6 86 77.9
Sed0027103 Sechium edule HOM05D007792 ORTHO05D009931 2.6e-28 128.6 86 77.9
MELO3C027088.2 Cucumis melo HOM05D007792 ORTHO05D009931 5.7e-28 127.5 86 76.7
Phvul.002G090500 Phaseolus vulgaris HOM05D007792 ORTHO05D009931 5.7e-28 127.5 88 77.3
Glyma.12G232100 Glycine max HOM05D007792 ORTHO05D009931 6.3e-27 124.0 88 75.0
BolC6t36199H Brassica oleracea HOM05D007792 ORTHO05D009931 8.2e-27 123.6 86 73.3
Sc09g0009720 Simmondsia chinensis HOM05D007792 ORTHO05D001488 1.1e-26 123.2 72 87.5
Gohir.A02G053101 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.8e-26 122.5 82 76.8
Sed0001088 Sechium edule HOM05D007792 ORTHO05D009931 4.1e-26 121.3 82 78.0
BraSC58t46493Z Brassica rapa HOM05D007792 ORTHO05D009931 7.0e-26 120.6 88 72.7
BolC2t08921H Brassica oleracea HOM05D007792 ORTHO05D009931 9.1e-26 120.2 86 73.3
CARHR287410 Cardamine hirsuta HOM05D007792 ORTHO05D009931 1.5e-25 119.4 104 64.4
Lalb_Chr07g0192061 Lupinus albus HOM05D007792 ORTHO05D009931 2.0e-25 119.0 88 70.5
Lalb_Chr08g0237911 Lupinus albus HOM05D007792 ORTHO05D009931 2.0e-25 119.0 88 70.5
Gohir.D09G044333 Gossypium hirsutum HOM05D007792 ORTHO05D009931 2.6e-25 118.6 71 85.9
Sc22g0003450 Simmondsia chinensis HOM05D002194 ORTHO05D002840 7.7e-25 117.1 72 84.7
Gohir.A11G230404 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.3e-24 116.3 71 84.5
LjContig00318g0025275 Lotus japonicus HOM05D007792 ORTHO05D009931 2.2e-24 115.5 90 66.7
C04p42970 Brassica napus HOM05D007792 ORTHO05D009931 2.9e-24 115.2 79 75.9
Lalb_Chr23g0274331 Lupinus albus HOM05D007792 ORTHO05D009931 8.5e-24 113.6 88 70.5
MELO3C028023.2 Cucumis melo HOM05D007792 ORTHO05D009931 2.5e-23 112.1 78 74.4
arahy.Tifrunner.gnm1.ann1.H056B9 Arachis hypogaea HOM05D007792 ORTHO05D009931 7.2e-23 110.5 74 75.7
Medtr4g034720 Medicago truncatula HOM05D007792 ORTHO05D009931 9.4e-23 110.2 88 68.2
Medtr7g085940 Medicago truncatula HOM05D007792 ORTHO05D009931 9.4e-23 110.2 88 68.2
Gorai.011G046100 Gossypium raimondii HOM05D007792 ORTHO05D009931 1.4e-21 106.3 69 78.3
Sed0005117 Sechium edule HOM05D007792 ORTHO05D009931 1.8e-21 105.9 81 69.1
Aqoxy2G00943 Aquilegia oxysepala HOM05D007792 ORTHO05D009931 3.0e-21 105.1 76 72.4
Gorai.012G094800 Gossypium raimondii HOM05D007792 ORTHO05D009931 4.0e-21 104.8 69 76.8
Gohir.D04G084960 Gossypium hirsutum HOM05D007792 ORTHO05D009931 8.8e-21 103.6 69 76.8
SGA_v2.0_scaffold479G52248 Striga asiatica HOM05D007792 ORTHO05D009931 4.4e-20 101.3 85 67.1
MELO3C028123.2 Cucumis melo HOM05D007792 ORTHO05D009931 1.2e-17 93.2 63 73.0
Gorai.002G210300 Gossypium raimondii HOM05D007792 ORTHO05D009931 3.5e-17 91.7 63 76.2
Nitab4.5_0007104g0100 Nicotiana tabacum HOM05D007792 ORTHO05D009931 2.9e-16 88.6 48 89.6
Gohir.D01G169022 Gossypium hirsutum HOM05D007792 ORTHO05D009931 5.0e-16 87.8 63 74.6
Glyma.01G201700 Glycine max HOM05D007792 ORTHO05D009931 8.5e-16 87.0 88 58.0
arahy.Tifrunner.gnm1.ann1.81C611 Arachis hypogaea HOM05D007792 ORTHO05D009931 9.4e-15 83.6 55 78.2
Eucgr.D02558 Eucalyptus grandis HOM05D007792 ORTHO05D009931 2.1e-14 82.4 57 77.2
BolC8t52434H Brassica oleracea HOM05D007792 ORTHO05D009931 9.8e-12 73.6 88 52.3
MD11G1294300 Malus domestica HOM05D007792 ORTHO05D009931 1.7e-11 72.8 42 90.5
arahy.Tifrunner.gnm1.ann1.4Z8JUD Arachis hypogaea HOM05D007792 ORTHO05D009931 2.8e-11 72.0 63 60.3
Haze_24215 Corylus avellana HOM05D002400 ORTHO05D002568 4.8e-11 71.2 48 68.8
Gorai.001G063300 Gossypium raimondii HOM05D007792 ORTHO05D009931 6.3e-11 70.9 68 60.3
Solyc00g500254.1 Solanum lycopersicum HOM05D007792 ORTHO05D010943 6.3e-11 70.9 48 77.1
Duzib071G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 2.4e-10 68.9 50 70.0
Duzib233G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 2.4e-10 68.9 50 70.0
Duzib237G0004 Durio zibethinus HOM05D000274 ORTHO05D002552 2.4e-10 68.9 50 70.0
Duzib253G0005 Durio zibethinus HOM05D000274 ORTHO05D002552 2.4e-10 68.9 50 70.0
Gohir.A10G134900 Gossypium hirsutum HOM05D007792 ORTHO05D009931 5.4e-10 67.8 43 81.4
EL10Ac4g08243 Beta vulgaris HOM05D007792 ORTHO05D009931 5.0e-08 61.2 57 59.6
Phvul.004G105000 Phaseolus vulgaris HOM05D007792 ORTHO05D009931 9.4e-07 57.0 34 82.4


User provided reference genes

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