Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g062300.3 Solanum lycopersicum HOM05D004500 ORTHO05D028702 2.8e-106 388.7 198 100.0
Sopen11g024300 Solanum pennellii HOM05D004500 ORTHO05D005775 3.5e-93 345.1 182 97.3
CAN.G1050.5 Capsicum annuum HOM05D004500 ORTHO05D005775 1.2e-77 293.5 178 84.8
Nitab4.5_0002026g0140 Nicotiana tabacum HOM05D004500 ORTHO05D005775 6.0e-77 291.2 179 84.9
Nitab4.5_0000492g0190 Nicotiana tabacum HOM05D004500 ORTHO05D005775 3.0e-76 288.9 179 84.4
Peaxi162Scf00029g02525 Petunia axillaris HOM05D004500 ORTHO05D028702 6.0e-61 238.0 176 72.2
Dinv22199 Davidia involucrata HOM05D004500 ORTHO05D005775 2.5e-43 179.5 180 53.3
Aqoxy1G00409 Aquilegia oxysepala HOM05D004500 ORTHO05D005775 4.3e-43 178.7 174 52.9
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 2.8e-42 176.0 175 52.6
Migut.D00681 Erythranthe guttata HOM05D004500 ORTHO05D005775 1.1e-41 174.1 167 53.9
MSTRG.21337 Avicennia marina HOM05D004500 ORTHO05D005775 3.1e-41 172.6 176 48.9
Duzib168G0672 Durio zibethinus HOM05D004500 ORTHO05D005775 4.1e-41 172.2 180 49.4
Oeu061692.5 Olea europaea HOM05D004500 ORTHO05D005775 4.5e-40 168.7 183 49.7
TAR623G1318 Trochodendron aralioides HOM05D004500 ORTHO05D005775 4.5e-40 168.7 170 52.4
CSS0026558 Camellia sinensis var. sinensis HOM05D004500 ORTHO05D005775 7.7e-40 167.9 180 51.1
Lj1C1068G11 Lonicera japonica HOM05D004500 ORTHO05D005775 1.3e-39 167.2 170 50.6
MBI19_g07497_MAGBIO Magnolia biondii HOM05D004500 ORTHO05D005775 1.3e-39 167.2 183 48.6
Cfa009915 Carpinus fangiana HOM05D004500 ORTHO05D005775 5.0e-39 165.2 174 49.4
SalBow6G2693 Salvia bowleyana HOM05D004500 ORTHO05D005775 5.0e-39 165.2 171 49.7
COL.COLO4_06617 Corchorus olitorius HOM05D004500 ORTHO05D005775 1.4e-38 163.7 180 47.2
CiPaw.13G147900 Carya illinoinensis HOM05D004500 ORTHO05D005775 4.2e-38 162.2 171 49.1
Thecc.09G254300 Theobroma cacao HOM05D004500 ORTHO05D005775 2.1e-37 159.8 180 47.2
vmacro04079 Vaccinium macrocarpon HOM05D004500 ORTHO05D005775 4.7e-37 158.7 177 48.0
Gohir.D09G105200 Gossypium hirsutum HOM05D004500 ORTHO05D005775 6.1e-37 158.3 180 45.0
Gorai.006G122400 Gossypium raimondii HOM05D004500 ORTHO05D005775 7.9e-37 157.9 180 45.0
Prupe.4G270300 Prunus persica HOM05D004500 ORTHO05D005775 7.9e-37 157.9 174 47.1
Gohir.A09G108500 Gossypium hirsutum HOM05D004500 ORTHO05D005775 1.4e-36 157.1 180 45.0
PSO339G3895 Papaver somniferum HOM05D004500 ORTHO05D005775 3.0e-36 156.0 168 45.8
ECA233G3879 Erigeron canadensis HOM05D004500 ORTHO05D005775 6.7e-36 154.8 169 46.2
QL01p016442 Quercus lobata HOM05D004500 ORTHO05D005775 1.1e-35 154.1 174 48.3
CANSAT54G2073 Cannabis sativa HOM05D004500 ORTHO05D005775 2.0e-35 153.3 181 45.3
Cc01_g06520 Coffea canephora HOM05D004500 ORTHO05D005775 2.0e-35 153.3 179 45.3
Eucgr.J00673 Eucalyptus grandis HOM05D004500 ORTHO05D005775 3.3e-35 152.5 169 46.7
HanXRQChr12g0380331 Helianthus annuus HOM05D004500 ORTHO05D005775 3.3e-35 152.5 177 48.6
Lsat_1_v5_gn_5_70881 Lactuca sativa HOM05D004500 ORTHO05D005775 4.4e-35 152.1 177 46.9
Potri.001G274500 Populus trichocarpa HOM05D004500 ORTHO05D005775 5.7e-35 151.8 160 51.2
Sc09g0001130 Simmondsia chinensis HOM05D004500 ORTHO05D005775 7.4e-35 151.4 175 44.0
Atru.chr3.2854 Acer truncatum HOM05D004500 ORTHO05D005775 1.7e-34 150.2 176 48.3
Atru.chr3.2856 Acer truncatum HOM05D004500 ORTHO05D005775 1.7e-34 150.2 176 48.3
FAN25G3650 Fragaria x ananassa HOM05D004500 ORTHO05D005775 1.7e-34 150.2 174 46.0
Nn7g36895 Nelumbo nucifera HOM05D004500 ORTHO05D005775 2.2e-34 149.8 170 44.1
FAN21G1747 Fragaria x ananassa HOM05D004500 ORTHO05D005775 2.8e-34 149.4 174 46.0
Sabra16G0169000 Salix brachista HOM05D004500 ORTHO05D005775 4.8e-34 148.7 162 51.2
TWI75G0701 Tripterygium wilfordii HOM05D004500 ORTHO05D005775 4.8e-34 148.7 183 48.6
FvH4_3g28920 Fragaria vesca HOM05D004500 ORTHO05D005775 6.3e-34 148.3 173 45.1
FAN11G1622 Fragaria x ananassa HOM05D004500 ORTHO05D005775 6.3e-34 148.3 173 45.1
Manes.02G138300 Manihot esculenta HOM05D004500 ORTHO05D005775 6.3e-34 148.3 171 48.0
DCAR_023834 Daucus carota HOM05D004500 ORTHO05D005775 1.8e-33 146.7 173 45.1
Actinidia06989 Actinidia chinensis HOM05D004500 ORTHO05D005775 2.4e-33 146.4 163 47.9
Medtr5g089000 Medicago truncatula HOM05D004500 ORTHO05D005775 9.1e-33 144.4 169 42.6
RcHm_v2.0_Chr5g0051931 Rosa chinensis HOM05D004500 ORTHO05D005775 1.2e-32 144.1 174 42.5
Haze_23271 Corylus avellana HOM05D004500 ORTHO05D005775 2.0e-32 143.3 165 46.7
RcHm_v2.0_Chr5g0051871 Rosa chinensis HOM05D004500 ORTHO05D005775 2.0e-32 143.3 174 42.0
MD03G1157000 Malus domestica HOM05D004500 ORTHO05D005775 3.5e-32 142.5 171 44.4
Ciclev10014018m.g Citrus clementina HOM05D004500 ORTHO05D005775 1.7e-31 140.2 149 51.7
Glyma.14G036800 Glycine max HOM05D004500 ORTHO05D005775 2.2e-31 139.8 170 41.8
Phvul.008G203200 Phaseolus vulgaris HOM05D004500 ORTHO05D005775 2.2e-31 139.8 173 42.8
arahy.Tifrunner.gnm1.ann1.G3VBDM Arachis hypogaea HOM05D004500 ORTHO05D005775 2.9e-31 139.4 169 42.0
arahy.Tifrunner.gnm1.ann1.VEQ9JC Arachis hypogaea HOM05D004500 ORTHO05D005775 2.9e-31 139.4 169 42.0
EL10Ac4g10085 Beta vulgaris HOM05D004500 ORTHO05D005775 5.0e-31 138.7 168 42.9
Cpa.g.sc34.185 Carica papaya HOM05D004500 ORTHO05D005775 6.5e-31 138.3 165 45.5
LjContig00564g0025272 Lotus japonicus HOM05D004500 ORTHO05D005775 8.5e-31 137.9 170 43.5
Hund07422 Selenicereus undatus HOM05D004500 ORTHO05D005775 8.5e-31 137.9 169 42.0
TPR.G16395 Trifolium pratense HOM05D004500 ORTHO05D005775 1.5e-30 137.1 173 39.3
Lalb_Chr10g0106121 Lupinus albus HOM05D004500 ORTHO05D005775 3.2e-30 136.0 173 39.9
Ca_06188_v3 Cicer arietinum L. HOM05D004500 ORTHO05D005775 7.2e-30 134.8 170 41.2
MELO3C014542.2 Cucumis melo HOM05D004500 ORTHO05D005775 4.7e-29 132.1 174 42.0
CsaV3_6G038790 Cucumis sativus L. HOM05D004500 ORTHO05D005775 8.0e-29 131.3 172 42.4
AUR62006566 Chenopodium quinoa HOM05D004500 ORTHO05D005775 3.0e-28 129.4 172 42.4
ATR0307G114 Amborella trichopoda HOM05D004500 ORTHO05D005775 4.0e-28 129.0 164 45.7
ClCG02G022670 Citrullus lanatus HOM05D004500 ORTHO05D005775 4.0e-28 129.0 174 42.5
Os12g0134200 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 1.1e-27 127.5 172 42.4
THA.LOC104800461 Tarenaya hassleriana HOM05D004500 ORTHO05D005775 4.4e-27 125.6 173 41.0
AL4G19970 Arabidopsis lyrata HOM05D004500 ORTHO05D005775 5.7e-27 125.2 170 41.2
Sed0001243 Sechium edule HOM05D004500 ORTHO05D005775 5.7e-27 125.2 171 42.1
CDE02G1487 Ceratophyllum demersum HOM05D004500 ORTHO05D028702 9.7e-27 124.4 173 41.6
Aa31LG5G9010 Aethionema arabicum HOM05D004500 ORTHO05D005775 1.7e-26 123.6 169 39.1
Thhalv10011180m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 1.7e-26 123.6 170 39.4
Zm00001eb196280 Zea mays HOM05D004500 ORTHO05D005775 2.2e-26 123.2 172 42.4
AUR62000221 Chenopodium quinoa HOM05D004500 ORTHO05D005775 3.7e-26 122.5 169 41.4
AT2G26780 Arabidopsis thaliana HOM05D004500 ORTHO05D005775 6.3e-26 121.7 170 40.0
CARHR118960 Cardamine hirsuta HOM05D004500 ORTHO05D005775 8.2e-26 121.3 170 39.4
unitig_578.g16660 Utricularia gibba HOM05D004500 ORTHO05D005775 2.4e-25 119.8 171 39.8
Sp1g40640 Schrenkiella parvula HOM05D004500 ORTHO05D005775 3.1e-25 119.4 170 39.4
A08p01100 Brassica napus HOM05D004500 ORTHO05D005775 4.1e-25 119.0 172 39.5
SGA_v2.0_scaffold29G12209 Striga asiatica HOM05D004500 ORTHO05D005775 5.3e-25 118.6 179 41.3
C03p92100 Brassica napus HOM05D004500 ORTHO05D005775 9.1e-25 117.9 167 39.5
BolC3t21527H Brassica oleracea HOM05D004500 ORTHO05D005775 1.2e-24 117.5 167 39.5
BraA08t32166Z Brassica rapa HOM05D004500 ORTHO05D005775 2.0e-24 116.7 167 38.9
Nitab4.5_0004629g0080 Nicotiana tabacum HOM05D004500 ORTHO05D028702 2.7e-24 116.3 73 80.8
Carub.0004s0721 Capsella rubella HOM05D004500 ORTHO05D005775 5.9e-24 115.2 170 38.2
Ah.06g194800 Amaranthus hybridus HOM05D004500 ORTHO05D005775 2.2e-23 113.2 157 38.2
Psat0s2305g0080 Pisum sativum HOM05D004500 ORTHO05D005775 4.8e-18 95.5 113 42.5
HPP92_022831 Vanilla planifolia HOM05D004500 ORTHO05D005775 2.2e-10 70.1 174 28.2
SEGI_01442 Sequoiadendron giganteum HOM05D004500 ORTHO05D050968 5.9e-08 62.0 114 34.2
AagrBONN_evm.TU.Sc2ySwM_117.694 Anthoceros agrestis HOM05D004500 ORTHO05D005775 5.0e-07 58.9 193 30.1
SEGI_28959 Sequoiadendron giganteum HOM05D004500 ORTHO05D050968 5.0e-07 58.9 111 34.2
Mapoly0009s0155 Marchantia polymorpha HOM05D004500 ORTHO05D005775 1.1e-06 57.8 171 24.6


User provided reference genes

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