Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g062110.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.5e-71 271.9 131 100.0
BolSC45t60875H Brassica oleracea HOM05D000216 ORTHO05D000634 1.7e-27 126.3 86 72.1
Lalb_Chr13g0292861 Lupinus albus HOM05D000216 ORTHO05D000634 3.2e-26 122.1 89 68.5
EL10Ac9g21013 Beta vulgaris HOM05D000216 ORTHO05D000634 1.1e-23 113.6 143 42.7
CAN.G1576.7 Capsicum annuum HOM05D000216 ORTHO05D000634 1.9e-23 112.8 58 89.7
CAN.G1738.8 Capsicum annuum HOM05D000216 ORTHO05D000634 1.9e-23 112.8 58 89.7
CAN.G219.18 Capsicum annuum HOM05D000216 ORTHO05D000634 1.9e-23 112.8 58 89.7
CAN.G511.8 Capsicum annuum HOM05D000216 ORTHO05D000634 1.9e-23 112.8 58 89.7
CAN.G939.15 Capsicum annuum HOM05D000216 ORTHO05D000634 1.9e-23 112.8 58 89.7
Nitab4.5_0002868g0020 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.9e-23 112.8 58 89.7
PGSC0003DMG402029613 Solanum tuberosum HOM05D000216 ORTHO05D000634 1.9e-23 112.8 58 89.7
CAN.G1478.17 Capsicum annuum HOM05D000216 ORTHO05D000634 5.6e-23 111.3 58 87.9
CAN.G1648.9 Capsicum annuum HOM05D000216 ORTHO05D000634 1.6e-22 109.8 58 87.9
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.6e-22 109.8 85 62.4
LjContig00489g0016986 Lotus japonicus HOM05D000216 ORTHO05D000634 2.1e-22 109.4 58 84.5
Hma1.2p1_0094F.1_g047102 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 1.4e-21 106.7 58 79.3
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.8e-21 106.3 58 81.0
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 1.8e-21 106.3 58 81.0
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 1.8e-21 106.3 58 81.0
Nitab4.5_0000172g0350 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.4e-21 105.9 86 66.3
Lsat_1_v5_gn_6_87861 Lactuca sativa HOM05D000216 ORTHO05D000634 4.0e-21 105.1 58 79.3
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 5.3e-21 104.8 92 55.4
BolSC45t60938H Brassica oleracea HOM05D000216 ORTHO05D000634 9.0e-21 104.0 80 65.0
Hund27655 Selenicereus undatus HOM05D000216 ORTHO05D000634 9.0e-21 104.0 58 81.0
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 9.0e-21 104.0 58 81.0
PGR111G0082 Punica granatum HOM05D000216 ORTHO05D000634 4.5e-20 101.7 55 85.5
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 4.5e-20 101.7 55 83.6
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 5.8e-20 101.3 97 53.6
DCAR_032475 Daucus carota HOM05D000216 ORTHO05D000634 7.6e-20 100.9 55 81.8
Gohir.A03G019466 Gossypium hirsutum HOM05D000216 ORTHO05D000634 7.6e-20 100.9 56 83.9
Sed0020606 Sechium edule HOM05D000216 ORTHO05D000634 2.9e-19 99.0 55 83.6
Sed0024913 Sechium edule HOM05D000216 ORTHO05D000634 2.9e-19 99.0 55 83.6
Sed0025165 Sechium edule HOM05D000216 ORTHO05D000634 6.5e-19 97.8 52 86.5
Lalb_Chr09g0335381 Lupinus albus HOM05D000216 ORTHO05D000634 1.4e-18 96.7 52 80.8
PSO548G0054 Papaver somniferum HOM05D000216 ORTHO05D000634 1.4e-18 96.7 55 80.0
ATCG00180 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 1.9e-18 96.3 52 82.7
BraSC151t45696Z Brassica rapa HOM05D000216 ORTHO05D000634 1.9e-18 96.3 59 74.6
BraSC140t45587Z Brassica rapa HOM05D000216 ORTHO05D000634 2.5e-18 95.9 58 72.4
BraSC151t45702Z Brassica rapa HOM05D000216 ORTHO05D000634 2.5e-18 95.9 58 72.4
BraSC58t46478Z Brassica rapa HOM05D000216 ORTHO05D000634 2.5e-18 95.9 58 72.4
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 2.5e-18 95.9 52 80.8
Medtr3g062770 Medicago truncatula HOM05D000216 ORTHO05D000634 3.2e-18 95.5 52 75.0
Medtr3g062790 Medicago truncatula HOM05D000216 ORTHO05D000634 3.2e-18 95.5 52 75.0
BolC7t41734H Brassica oleracea HOM05D000216 ORTHO05D000634 4.2e-18 95.1 52 80.8
BolSC37t60767H Brassica oleracea HOM05D000216 ORTHO05D000634 4.2e-18 95.1 52 80.8
arahy.Tifrunner.gnm1.ann1.YJD706 Arachis hypogaea HOM05D000216 ORTHO05D000634 7.1e-18 94.4 52 76.9
unitig_91.g26497 Utricularia gibba HOM05D000216 ORTHO05D000634 9.3e-18 94.0 58 74.1
Medtr8g016510 Medicago truncatula HOM05D000216 ORTHO05D000634 1.2e-17 93.6 52 73.1
Lalb_Chr24g0400941 Lupinus albus HOM05D000216 ORTHO05D000634 6.0e-17 91.3 52 76.9
Potri.013G140850 Populus trichocarpa HOM05D000216 ORTHO05D000634 6.0e-17 91.3 55 74.5
LjContig00318g0019842 Lotus japonicus HOM05D000216 ORTHO05D000634 3.9e-16 88.6 52 69.2
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 5.1e-16 88.2 59 71.2
Migut.O00862 Erythranthe guttata HOM05D000216 ORTHO05D000634 8.7e-16 87.4 55 76.4
Lsat_1_v5_gn_8_77281 Lactuca sativa HOM05D000216 ORTHO05D000634 8.7e-16 87.4 60 65.0
Psat0s5655g0120 Pisum sativum HOM05D000216 ORTHO05D000634 8.7e-16 87.4 55 65.5
FAN07G1905 Fragaria x ananassa HOM05D000216 ORTHO05D000634 1.5e-15 86.7 52 76.9
MD01G1014400 Malus domestica HOM05D000216 ORTHO05D000634 1.9e-15 86.3 58 67.2
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 3.3e-15 85.5 82 54.9
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 1.3e-14 83.6 45 73.3
AL2G20940 Arabidopsis lyrata HOM05D000216 ORTHO05D000634 2.1e-14 82.8 77 55.8
Lsat_1_v5_gn_1_96161 Lactuca sativa HOM05D000216 ORTHO05D000634 2.1e-14 82.8 42 83.3
Lalb_Chr06g0173031 Lupinus albus HOM05D000216 ORTHO05D000634 1.1e-13 80.5 73 54.8
HPP92_028443 Vanilla planifolia HOM05D000216 ORTHO05D000634 1.4e-13 80.1 52 67.3
Hund12598 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.6e-12 74.3 46 71.7
Hund28575 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.6e-12 74.3 59 61.0
SEGI_37297 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 1.4e-10 70.1 91 42.9
BcaB03g16406 Brassica carinata HOM05D000216 ORTHO05D000634 3.2e-10 68.9 46 67.4
BcaC05g28801 Brassica carinata HOM05D000216 ORTHO05D000634 3.2e-10 68.9 46 67.4
Peaxi162Scf00122g00087 Petunia axillaris HOM05D000216 ORTHO05D000634 4.2e-10 68.6 31 96.8
HanXRQChr00c0994g0578181 Helianthus annuus HOM05D000216 ORTHO05D000634 9.3e-10 67.4 34 85.3
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-09 67.0 91 46.2
SEGI_00207 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 3.5e-09 65.5 75 49.3
SEGI_19449 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 3.5e-09 65.5 75 49.3
ClCG10G007470 Citrullus lanatus HOM05D000014 ORTHO05D000016 3.0e-08 62.4 29 89.7
Nitab4.5_0000453g0180 Nicotiana tabacum HOM05D021481 ORTHO05D000634 3.0e-08 62.4 34 88.2
Migut.D01416 Erythranthe guttata HOM05D000216 ORTHO05D000634 3.9e-08 62.0 38 78.9
Sabra10G0056100 Salix brachista HOM05D000540 ORTHO05D000681 5.7e-07 58.2 37 70.3
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 5.7e-07 58.2 37 70.3
Lalb_Chr07g0192461 Lupinus albus HOM05D000216 ORTHO05D000634 4.8e-06 55.1 27 85.2


User provided reference genes

Program Settings