Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g050770.1 Solanum lycopersicum HOM05D007755 ORTHO05D009866 6.6e-38 160.2 82 100.0
CAN.G679.8 Capsicum annuum HOM05D007755 ORTHO05D009866 3.5e-23 111.3 62 95.2
Solyc01g102770.1 Solanum lycopersicum HOM05D007755 ORTHO05D009866 3.5e-23 111.3 62 95.2
LjContig00489g0017505 Lotus japonicus HOM05D007755 ORTHO05D009866 2.3e-22 108.6 62 91.9
PGR111G0111 Punica granatum HOM05D007755 ORTHO05D009866 3.0e-22 108.2 62 91.9
Migut.J01358 Erythranthe guttata HOM05D007755 ORTHO05D009866 5.1e-22 107.5 62 91.9
HanXRQChr00c0272g0573011 Helianthus annuus HOM05D007755 ORTHO05D009866 5.1e-22 107.5 62 91.9
HanXRQChr00c0300g0573261 Helianthus annuus HOM05D007755 ORTHO05D009866 5.1e-22 107.5 62 91.9
HanXRQChr00c0313g0573411 Helianthus annuus HOM05D007755 ORTHO05D009866 5.1e-22 107.5 62 91.9
HanXRQChr00c0920g0577881 Helianthus annuus HOM05D007755 ORTHO05D009866 5.1e-22 107.5 62 91.9
HanXRQChr02g0041661 Helianthus annuus HOM05D007755 ORTHO05D009866 5.1e-22 107.5 62 91.9
HanXRQChr02g0044811 Helianthus annuus HOM05D007755 ORTHO05D009866 5.1e-22 107.5 62 91.9
HanXRQChr04g0099331 Helianthus annuus HOM05D007755 ORTHO05D009866 5.1e-22 107.5 62 91.9
HanXRQChr07g0201081 Helianthus annuus HOM05D007755 ORTHO05D009866 5.1e-22 107.5 62 91.9
HanXRQChr08g0210241 Helianthus annuus HOM05D007755 ORTHO05D009866 5.1e-22 107.5 62 91.9
HanXRQChr10g0282461 Helianthus annuus HOM05D007755 ORTHO05D009866 5.1e-22 107.5 62 91.9
HanXRQChr11g0326681 Helianthus annuus HOM05D007755 ORTHO05D009866 5.1e-22 107.5 62 91.9
HanXRQCPg0579881 Helianthus annuus HOM05D007755 ORTHO05D009866 5.1e-22 107.5 62 91.9
RcHm_v2.0_Chr3g0491831 Rosa chinensis HOM05D007755 ORTHO05D009866 5.1e-22 107.5 62 90.3
RcHm_v2.0_CPg0502301 Rosa chinensis HOM05D007755 ORTHO05D009866 5.1e-22 107.5 62 90.3
Potri.013G142548 Populus trichocarpa HOM05D007755 ORTHO05D009866 6.7e-22 107.1 62 90.3
AL2G20820 Arabidopsis lyrata HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 90.3
AL2G21330 Arabidopsis lyrata HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 90.3
ATCG00300 Arabidopsis thaliana HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 90.3
A06p23320 Brassica napus HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 90.3
BNapus_Darmor_BZH_scaffold_287p00020 Brassica napus HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 90.3
C09p40450 Brassica napus HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 90.3
BolC7t41728H Brassica oleracea HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 90.3
BolC9t56908H Brassica oleracea HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 90.3
BolSC29t60454H Brassica oleracea HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 90.3
BolSC45t60871H Brassica oleracea HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 90.3
BolSC47t61109H Brassica oleracea HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 90.3
BolSC47t61113H Brassica oleracea HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 90.3
BraA06t25434Z Brassica rapa HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 90.3
BraSC140t45582Z Brassica rapa HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 90.3
CARHR281980 Cardamine hirsuta HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 90.3
DCAR_032481 Daucus carota HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 90.3
Gohir.D06G164048 Gossypium hirsutum HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 91.9
Gohir.D08G128420 Gossypium hirsutum HOM05D007755 ORTHO05D009866 1.1e-21 106.3 62 91.9
HanXRQChr05g0151401 Helianthus annuus HOM05D007755 ORTHO05D009866 1.5e-21 105.9 62 90.3
LjContig00318g0015447 Lotus japonicus HOM05D007755 ORTHO05D009866 1.5e-21 105.9 62 90.3
Prupe.2G104500 Prunus persica HOM05D007755 ORTHO05D009866 1.5e-21 105.9 62 88.7
Nn020s41507 Nelumbo nucifera HOM05D007755 ORTHO05D009866 1.9e-21 105.5 62 88.7
Nn082s42679 Nelumbo nucifera HOM05D007755 ORTHO05D009866 1.9e-21 105.5 62 88.7
Nn287s46147 Nelumbo nucifera HOM05D007755 ORTHO05D009866 1.9e-21 105.5 62 88.7
Nn3g19094 Nelumbo nucifera HOM05D007755 ORTHO05D009866 1.9e-21 105.5 62 88.7
Medtr8g056780 Medicago truncatula HOM05D007755 ORTHO05D009866 2.5e-21 105.1 62 88.7
Sed0002727 Sechium edule HOM05D007755 ORTHO05D009866 2.5e-21 105.1 62 88.7
Sed0008331 Sechium edule HOM05D007755 ORTHO05D009866 2.5e-21 105.1 62 88.7
Sed0012017 Sechium edule HOM05D007755 ORTHO05D009866 2.5e-21 105.1 62 88.7
Sed0014140 Sechium edule HOM05D007755 ORTHO05D009866 2.5e-21 105.1 62 88.7
Sed0021343 Sechium edule HOM05D007755 ORTHO05D009866 2.5e-21 105.1 62 88.7
Sed0024615 Sechium edule HOM05D007755 ORTHO05D009866 2.5e-21 105.1 62 88.7
Glyma.01G095900 Glycine max HOM05D007755 ORTHO05D009866 4.3e-21 104.4 62 87.1
Gohir.1Z049880 Gossypium hirsutum HOM05D007755 ORTHO05D009866 5.6e-21 104.0 62 88.7
Gohir.A05G086100 Gossypium hirsutum HOM05D007755 ORTHO05D009866 5.6e-21 104.0 62 90.3
Gohir.A12G121501 Gossypium hirsutum HOM05D007755 ORTHO05D009866 7.4e-21 103.6 62 90.3
Migut.D01347 Erythranthe guttata HOM05D007755 ORTHO05D009866 9.6e-21 103.2 58 93.1
Gohir.A12G076900 Gossypium hirsutum HOM05D007755 ORTHO05D009866 1.3e-20 102.8 62 90.3
PSO548G0042 Papaver somniferum HOM05D007755 ORTHO05D009866 1.3e-20 102.8 62 88.7
CAN.G201.1 Capsicum annuum HOM05D007755 ORTHO05D009866 1.6e-20 102.4 62 88.7
MD11G1068400 Malus domestica HOM05D007755 ORTHO05D009866 1.6e-20 102.4 62 85.5
Solyc10g017950.2 Solanum lycopersicum HOM05D007755 ORTHO05D009866 1.6e-20 102.4 62 90.3
BraSC179t45795Z Brassica rapa HOM05D007755 ORTHO05D009866 4.8e-20 100.9 62 87.1
HanXRQChr11g0330571 Helianthus annuus HOM05D007755 ORTHO05D009866 6.2e-20 100.5 62 87.1
Phvul.010G069000 Phaseolus vulgaris HOM05D007755 ORTHO05D009866 1.4e-19 99.4 62 82.3
Gohir.A01G164800 Gossypium hirsutum HOM05D007755 ORTHO05D009866 1.8e-19 99.0 62 87.1
BolSC44t60853H Brassica oleracea HOM05D007755 ORTHO05D009866 6.9e-19 97.1 58 86.2
BolSC49t61194H Brassica oleracea HOM05D007755 ORTHO05D009866 6.9e-19 97.1 58 86.2
Migut.M00584 Erythranthe guttata HOM05D007755 ORTHO05D009866 9.0e-19 96.7 55 92.7
Glyma.08G363500 Glycine max HOM05D007755 ORTHO05D009866 4.5e-18 94.4 62 79.0
Gorai.003G070800 Gossypium raimondii HOM05D007755 ORTHO05D009866 4.5e-18 94.4 62 80.6
Eucgr.B02051 Eucalyptus grandis HOM05D007755 ORTHO05D009866 7.6e-18 93.6 62 79.0
Thhalv10011069m.g Eutrema salsugineum HOM05D007755 ORTHO05D009866 1.3e-17 92.8 54 87.0
EL10As15g24140 Beta vulgaris HOM05D000890 ORTHO05D009866 4.9e-17 90.9 58 86.2
Hma1.2p1_0149F.1_g066480 Hydrangea macrophylla HOM05D007755 ORTHO05D009866 1.4e-16 89.4 62 77.4
Os12g0504050 Oryza sativa ssp. japonica HOM05D007755 ORTHO05D009866 1.6e-15 85.9 62 74.2
Nn2g13213 Nelumbo nucifera HOM05D007755 ORTHO05D009866 4.6e-15 84.3 46 89.1
Lsat_1_v5_gn_8_5961 Lactuca sativa HOM05D007755 ORTHO05D009866 1.9e-13 79.0 61 77.0
BraSC143t45685Z Brassica rapa HOM05D007755 ORTHO05D009866 5.7e-13 77.4 47 85.1
CsaV3_5G013710 Cucumis sativus L. HOM05D007755 ORTHO05D009866 2.4e-11 72.0 43 86.0
CSS0044859 Camellia sinensis var. sinensis HOM05D007755 ORTHO05D009866 7.6e-10 67.0 45 75.6
SMO086G0034 Selaginella moellendorffii HOM05D007755 ORTHO05D009866 7.6e-10 67.0 61 62.3
MD00G1208700 Malus domestica HOM05D007755 ORTHO05D009866 3.5e-07 58.2 49 67.3
AL2G25590 Arabidopsis lyrata HOM05D007755 ORTHO05D009866 7.9e-07 57.0 52 65.4


User provided reference genes

Program Settings