Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 1.6e-180 636.0 319 100.0
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 1.3e-177 626.3 319 97.8
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 1.4e-168 596.3 307 95.8
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 1.0e-155 553.5 307 88.6
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 9.5e-149 530.4 307 85.7
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 5.2e-147 524.6 307 84.4
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 6.8e-147 524.2 307 84.0
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 1.9e-101 373.2 307 60.9
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 2.5e-101 372.9 307 61.2
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 2.5e-101 372.9 308 60.4
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 4.3e-101 372.1 302 60.9
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 5.6e-101 371.7 307 60.9
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 1.3e-100 370.5 309 60.5
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 2.8e-100 369.4 295 63.7
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 3.7e-100 369.0 307 60.6
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 2.0e-98 363.2 307 59.9
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 1.0e-97 360.9 307 59.9
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 1.7e-97 360.1 307 60.6
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 3.8e-97 359.0 307 59.0
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 7.1e-96 354.8 307 58.3
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 7.1e-96 354.8 302 58.6
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.2e-95 354.0 307 60.6
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 7.9e-95 351.3 331 55.6
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 1.8e-94 350.1 307 56.7
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 1.8e-94 350.1 307 57.3
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 8.7e-94 347.8 307 56.4
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 3.3e-93 345.9 301 59.5
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 1.6e-92 343.6 307 57.3
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 2.1e-92 343.2 307 55.7
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 2.8e-92 342.8 301 57.5
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 4.8e-92 342.0 306 58.5
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 6.2e-92 341.7 307 57.7
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 8.2e-92 341.3 310 56.8
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 1.8e-91 340.1 307 57.7
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 3.1e-91 339.3 307 57.0
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 3.1e-91 339.3 303 57.8
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 9.0e-91 337.8 296 59.5
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 4.5e-90 335.5 306 55.9
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 4.5e-90 335.5 364 50.3
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 1.3e-89 334.0 307 54.4
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 6.5e-89 331.6 306 53.9
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 6.5e-89 331.6 307 56.0
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 2.5e-88 329.7 306 54.9
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 4.2e-88 328.9 309 57.3
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 9.3e-88 327.8 309 55.7
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 9.3e-88 327.8 307 55.7
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 9.3e-88 327.8 321 54.2
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 3.5e-87 325.9 301 54.8
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 3.5e-87 325.9 301 54.8
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 4.6e-87 325.5 306 55.2
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 7.9e-87 324.7 305 56.1
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 7.9e-87 324.7 309 54.0
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 1.3e-86 323.9 309 57.0
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 1.3e-86 323.9 304 55.9
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 2.3e-86 323.2 307 56.0
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 6.7e-86 321.6 307 57.0
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 8.7e-86 321.2 307 56.4
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 1.1e-85 320.9 307 53.4
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 5.7e-85 318.5 303 54.1
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 1.3e-84 317.4 306 53.9
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 1.6e-84 317.0 307 56.0
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 2.8e-84 316.2 307 52.8
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 1.4e-83 313.9 301 54.5
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 1.8e-83 313.5 307 51.8
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 4.1e-83 312.4 307 53.1
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 5.3e-83 312.0 307 54.4
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 6.9e-83 311.6 307 52.8
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 9.0e-83 311.2 310 54.5
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 1.2e-82 310.8 307 51.5
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 1.2e-82 310.8 308 52.3
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 2.0e-82 310.1 306 52.3
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 2.0e-82 310.1 305 52.1
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 1.3e-81 307.4 309 53.7
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 3.8e-81 305.8 307 53.4
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 5.0e-81 305.4 307 51.5
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 6.5e-81 305.1 311 51.8
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 1.9e-80 303.5 306 53.9
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 3.2e-80 302.8 309 53.1
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 2.7e-79 299.7 307 52.8
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 2.7e-79 299.7 307 52.8
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 3.6e-79 299.3 295 54.9
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 4.6e-79 298.9 307 52.4
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.4e-78 297.4 278 54.3
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 2.5e-77 293.1 306 52.6
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 3.3e-77 292.7 311 49.2
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 9.7e-77 291.2 307 52.1
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 1.3e-76 290.8 302 51.3
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 5.3e-75 285.4 305 52.5
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 4.5e-74 282.3 307 47.2
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 7.9e-71 271.6 316 44.6
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 1.4e-70 270.8 316 44.6
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 1.1e-69 267.7 264 52.3
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 7.4e-69 265.0 307 48.9
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 2.8e-68 263.1 309 47.9
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 8.0e-63 245.0 250 50.4
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 2.8e-60 236.5 209 59.3
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 4.1e-59 232.6 271 46.5
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 3.5e-58 229.6 308 42.9
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 7.7e-58 228.4 240 51.7
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 1.0e-57 228.0 307 46.6
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 4.7e-55 219.2 200 57.0
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 1.4e-54 217.6 201 57.2
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 5.2e-54 215.7 198 60.1
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 8.8e-54 214.9 187 63.1
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 2.0e-53 213.8 187 62.0
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 3.6e-47 193.0 120 80.8
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 1.4e-46 191.0 134 71.6
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 1.8e-46 190.7 120 80.0
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 4.9e-44 182.6 252 40.9
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 9.2e-43 178.3 169 55.0
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 3.5e-34 149.8 106 68.9
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.7e-33 147.5 192 42.2
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 5.0e-33 146.0 307 29.0
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 3.7e-28 129.8 217 38.2
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 2.4e-27 127.1 120 55.8
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 1.3e-25 121.3 118 47.5
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 1.1e-24 118.2 171 39.8
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 4.7e-23 112.8 85 71.8
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 4.9e-20 102.8 99 51.5
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 4.9e-20 102.8 68 73.5
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 6.4e-20 102.4 69 71.0
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 1.4e-19 101.3 295 27.1
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 1.2e-18 98.2 263 31.2
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 1.7e-12 77.8 64 57.8
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 3.2e-11 73.6 58 56.9
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 9.6e-08 62.0 116 36.2


User provided reference genes

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