Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g044990.1 Solanum lycopersicum HOM05D003486 ORTHO05D004600 2.1e-61 238.8 120 100.0
Sopen11g020460 Solanum pennellii HOM05D003486 ORTHO05D004600 1.4e-15 86.7 50 82.0
Atru.chr3.1489 Acer truncatum HOM05D003486 ORTHO05D004600 7.5e-14 80.9 50 74.0
FvH4_4g10800 Fragaria vesca HOM05D003486 ORTHO05D004600 1.7e-13 79.7 50 74.0
FAN12G3204 Fragaria x ananassa HOM05D003486 ORTHO05D004600 1.7e-13 79.7 50 74.0
FAN17G1210 Fragaria x ananassa HOM05D003486 ORTHO05D004600 1.7e-13 79.7 50 74.0
PGR083G0732 Punica granatum HOM05D003486 ORTHO05D004600 1.7e-13 79.7 52 71.2
MELO3C011660.2 Cucumis melo HOM05D003486 ORTHO05D004600 2.8e-13 79.0 52 69.2
CsaV3_6G003940 Cucumis sativus L. HOM05D003486 ORTHO05D004600 2.8e-13 79.0 52 69.2
Potri.007G128300 Populus trichocarpa HOM05D003486 ORTHO05D004600 2.8e-13 79.0 50 72.0
Sabra07G0104700 Salix brachista HOM05D003486 ORTHO05D004600 2.8e-13 79.0 50 72.0
SalBow3G2610 Salvia bowleyana HOM05D003486 ORTHO05D004600 2.8e-13 79.0 50 72.0
Thhalv10005755m.g Eutrema salsugineum HOM05D003486 ORTHO05D004600 3.7e-13 78.6 52 69.2
MD04G1040400 Malus domestica HOM05D003486 ORTHO05D004600 3.7e-13 78.6 52 69.2
Manes.11G120800 Manihot esculenta HOM05D003486 ORTHO05D004600 3.7e-13 78.6 50 72.0
Oeu061594.1 Olea europaea HOM05D003486 ORTHO05D004600 3.7e-13 78.6 50 72.0
Prupe.1G194100 Prunus persica HOM05D003486 ORTHO05D004600 3.7e-13 78.6 52 69.2
SGA_v2.0_scaffold17G08091 Striga asiatica HOM05D003486 ORTHO05D004600 3.7e-13 78.6 50 72.0
AT3G59410 Arabidopsis thaliana HOM05D003486 ORTHO05D004600 4.8e-13 78.2 52 69.2
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 4.8e-13 78.2 52 69.2
Eucgr.A00081 Eucalyptus grandis HOM05D003486 ORTHO05D004600 4.8e-13 78.2 115 42.6
Gohir.A10G137350 Gossypium hirsutum HOM05D003486 ORTHO05D004600 4.8e-13 78.2 50 72.0
Gohir.D10G129301 Gossypium hirsutum HOM05D003486 ORTHO05D004600 4.8e-13 78.2 50 72.0
Gorai.011G142600 Gossypium raimondii HOM05D003486 ORTHO05D004600 4.8e-13 78.2 50 72.0
Sp5g03730 Schrenkiella parvula HOM05D003486 ORTHO05D004600 4.8e-13 78.2 68 58.8
CiPaw.01G100300 Carya illinoinensis HOM05D003486 ORTHO05D004600 6.3e-13 77.8 108 43.5
CANSAT78G0197 Cannabis sativa HOM05D003486 ORTHO05D004600 8.3e-13 77.4 52 67.3
Cfa015169 Carpinus fangiana HOM05D003486 ORTHO05D004600 1.1e-12 77.0 52 67.3
Cc03_g12950 Coffea canephora HOM05D003486 ORTHO05D004600 1.1e-12 77.0 47 72.3
Ciclev10019579m.g Citrus clementina HOM05D003486 ORTHO05D004600 1.4e-12 76.6 50 70.0
TWI15G0158 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 1.4e-12 76.6 50 70.0
TWI15G0580 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 1.4e-12 76.6 50 70.0
BcaC07g40457 Brassica carinata HOM05D003486 ORTHO05D004600 2.4e-12 75.9 52 67.3
Dinv44191 Davidia involucrata HOM05D003486 ORTHO05D004600 2.4e-12 75.9 52 65.4
Sc19g0002660 Simmondsia chinensis HOM05D003486 ORTHO05D004600 2.4e-12 75.9 50 70.0
Migut.G01067 Erythranthe guttata HOM05D003486 ORTHO05D004600 3.1e-12 75.5 82 51.2
Lsat_1_v5_gn_3_115420 Lactuca sativa HOM05D003486 ORTHO05D004600 3.1e-12 75.5 50 70.0
RcHm_v2.0_Chr4g0406781 Rosa chinensis HOM05D003486 ORTHO05D004600 3.1e-12 75.5 52 67.3
THA.LOC104803678 Tarenaya hassleriana HOM05D003486 ORTHO05D004600 3.1e-12 75.5 52 65.4
Rhsim02G0076900 Rhododendron simsii HOM05D003486 ORTHO05D004600 4.1e-12 75.1 52 67.3
Thecc.04G179700 Theobroma cacao HOM05D003486 ORTHO05D004600 4.1e-12 75.1 52 67.3
AL5G41310 Arabidopsis lyrata HOM05D003486 ORTHO05D004600 5.4e-12 74.7 43 79.1
Carub.0005s2615 Capsella rubella HOM05D003486 ORTHO05D004600 5.4e-12 74.7 52 67.3
PSO017G7170 Papaver somniferum HOM05D003486 ORTHO05D004600 5.4e-12 74.7 50 68.0
PSO675G4708 Papaver somniferum HOM05D003486 ORTHO05D004600 5.4e-12 74.7 50 68.0
Haze_01509 Corylus avellana HOM05D003486 ORTHO05D004600 7.0e-12 74.3 47 70.2
HanXRQChr03g0091131 Helianthus annuus HOM05D003486 ORTHO05D004600 7.0e-12 74.3 47 72.3
Lj6A53G34 Lonicera japonica HOM05D003486 ORTHO05D004600 7.0e-12 74.3 47 70.2
Nn1g09603 Nelumbo nucifera HOM05D003486 ORTHO05D004600 7.0e-12 74.3 47 70.2
EL10Ac3g05937 Beta vulgaris HOM05D003486 ORTHO05D004600 9.1e-12 73.9 52 65.4
BolC8t51043H Brassica oleracea HOM05D003486 ORTHO05D004600 9.1e-12 73.9 43 79.1
BraA09t40605Z Brassica rapa HOM05D003486 ORTHO05D004600 9.1e-12 73.9 43 79.1
ECA240G0242 Erigeron canadensis HOM05D003486 ORTHO05D004600 9.1e-12 73.9 47 72.3
Sed0025407 Sechium edule HOM05D003486 ORTHO05D004600 9.1e-12 73.9 52 63.5
Eucgr.L02279 Eucalyptus grandis HOM05D003486 ORTHO05D004600 1.2e-11 73.6 105 43.8
Phvul.011G054400 Phaseolus vulgaris HOM05D003486 ORTHO05D004600 1.2e-11 73.6 52 69.2
Actinidia11303 Actinidia chinensis HOM05D003486 ORTHO05D004600 1.6e-11 73.2 50 70.0
CDE02G1871 Ceratophyllum demersum HOM05D003486 ORTHO05D004600 1.6e-11 73.2 50 64.0
CARHR169800 Cardamine hirsuta HOM05D003486 ORTHO05D004600 2.0e-11 72.8 52 65.4
Ca_20787_v3 Cicer arietinum L. HOM05D003486 ORTHO05D004600 2.0e-11 72.8 52 69.2
Mapoly0088s0047 Marchantia polymorpha HOM05D003486 ORTHO05D004600 2.0e-11 72.8 50 68.0
Medtr4g067160 Medicago truncatula HOM05D003486 ORTHO05D004600 2.0e-11 72.8 52 69.2
Hund03158 Selenicereus undatus HOM05D003486 ORTHO05D004600 3.5e-11 72.0 52 65.4
BcaC07g40280 Brassica carinata HOM05D003486 ORTHO05D004600 4.5e-11 71.6 42 78.6
C08p34420 Brassica napus HOM05D003486 ORTHO05D004600 4.5e-11 71.6 42 78.6
CSS0039550 Camellia sinensis var. sinensis HOM05D003486 ORTHO05D004600 4.5e-11 71.6 52 63.5
AUR62002305 Chenopodium quinoa HOM05D003486 ORTHO05D004600 4.5e-11 71.6 52 63.5
AUR62015385 Chenopodium quinoa HOM05D003486 ORTHO05D004600 4.5e-11 71.6 115 38.3
TPR.G34255 Trifolium pratense HOM05D003486 ORTHO05D004600 4.5e-11 71.6 101 44.6
GSVIVG01010758001 Vitis vinifera HOM05D003486 ORTHO05D004600 4.5e-11 71.6 47 70.2
Glyma.12G052400 Glycine max HOM05D003486 ORTHO05D004600 5.9e-11 71.2 52 67.3
QL10p048816 Quercus lobata HOM05D003486 ORTHO05D004600 5.9e-11 71.2 52 67.3
VMungo1127G0960 Vigna mungo HOM05D003486 ORTHO05D004600 5.9e-11 71.2 52 67.3
A09p51690 Brassica napus HOM05D003486 ORTHO05D004600 1.0e-10 70.5 42 76.2
arahy.Tifrunner.gnm1.ann1.NQA14U Arachis hypogaea HOM05D003486 ORTHO05D004600 1.3e-10 70.1 52 65.4
arahy.Tifrunner.gnm1.ann1.Q0VLRE Arachis hypogaea HOM05D003486 ORTHO05D004600 1.3e-10 70.1 52 65.4
SEGI_08545 Sequoiadendron giganteum HOM05D003486 ORTHO05D004600 1.3e-10 70.1 50 64.0
Aqoxy2G04161 Aquilegia oxysepala HOM05D003486 ORTHO05D004600 1.7e-10 69.7 78 48.7
Lalb_Chr01g0003151 Lupinus albus HOM05D003486 ORTHO05D004600 1.7e-10 69.7 52 65.4
Aa31LG10G13760 Aethionema arabicum HOM05D003486 ORTHO05D004600 2.3e-10 69.3 45 68.9
Psat7g214880 Pisum sativum HOM05D003486 ORTHO05D004600 2.9e-10 68.9 52 65.4
Zm00001eb078800 Zea mays HOM05D003486 ORTHO05D004600 2.9e-10 68.9 52 61.5
ATR0824G223 Amborella trichopoda HOM05D003486 ORTHO05D004600 8.6e-10 67.4 50 60.0
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis HOM05D003486 ORTHO05D004600 3.3e-09 65.5 50 60.0
Pp3c26_5370 Physcomitrium patens HOM05D003486 ORTHO05D004600 4.2e-09 65.1 101 40.6
Lj3g0017553 Lotus japonicus HOM05D003486 ORTHO05D004600 9.5e-09 63.9 50 62.0
unitig_747.g21328 Utricularia gibba HOM05D003486 ORTHO05D004600 9.5e-09 63.9 40 70.0
SMO364G0666 Selaginella moellendorffii HOM05D003486 ORTHO05D004600 2.8e-08 62.4 50 58.0
Nitab4.5_0001946g0030 Nicotiana tabacum HOM05D000445 ORTHO05D000314 6.1e-08 61.2 44 72.7
Ah.07g202030 Amaranthus hybridus HOM05D003486 ORTHO05D004600 1.0e-07 60.5 31 87.1
Nitab4.5_0016174g0010 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.5e-06 56.6 32 90.6
CAN.G1625.3 Capsicum annuum HOM05D000445 ORTHO05D000314 2.0e-06 56.2 44 68.2
Sc15g0001780 Simmondsia chinensis HOM05D001387 ORTHO05D001250 5.7e-06 54.7 44 61.4


User provided reference genes

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