Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g042800.2 Solanum lycopersicum HOM05D011389 ORTHO05D006108 1.4e-108 396.4 211 100.0
Sopen11g019160 Solanum pennellii HOM05D011389 ORTHO05D006108 1.6e-104 382.9 211 96.7
PGSC0003DMG400020976 Solanum tuberosum HOM05D011389 ORTHO05D006108 9.0e-71 270.8 364 50.0
Peaxi162Scf00078g00310 Petunia axillaris HOM05D011389 ORTHO05D006108 1.7e-53 213.4 391 40.9
Nitab4.5_0011622g0020 Nicotiana tabacum HOM05D011389 ORTHO05D006108 1.7e-45 186.8 116 87.1
SGA_v2.0_scaffold118G32589 Striga asiatica HOM05D011389 ORTHO05D006108 6.7e-26 121.7 123 55.3
Rhsim04G0137200 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.0e-21 105.5 115 56.5
Peaxi162Scf00078g00039 Petunia axillaris HOM05D011389 ORTHO05D006108 1.5e-20 104.0 318 31.4
CAN.G379.27 Capsicum annuum HOM05D011389 ORTHO05D006108 1.8e-18 97.1 65 83.1
vmacro08809 Vaccinium macrocarpon HOM05D011389 ORTHO05D006108 5.7e-17 92.0 83 60.2
Nitab4.5_0011622g0030 Nicotiana tabacum HOM05D011389 ORTHO05D006108 1.3e-16 90.9 89 61.8
Sc02g0001270 Simmondsia chinensis HOM05D006485 ORTHO05D006108 1.4e-15 87.4 100 51.0
Ah.15g091240 Amaranthus hybridus HOM05D011389 ORTHO05D006108 2.4e-15 86.7 108 47.2
Migut.C01359 Erythranthe guttata HOM05D011389 ORTHO05D006108 5.3e-15 85.5 143 40.6
Lj3A1005G41 Lonicera japonica HOM05D011389 ORTHO05D006108 7.2e-12 75.1 77 58.4
Lj3C1005T3 Lonicera japonica HOM05D011389 ORTHO05D006108 7.2e-12 75.1 77 58.4
Actinidia32467 Actinidia chinensis HOM05D011389 ORTHO05D006108 8.0e-11 71.6 88 50.0
FAN02G3096 Fragaria x ananassa HOM05D006485 ORTHO05D006108 1.8e-10 70.5 100 45.0
Hund12313 Selenicereus undatus HOM05D006485 ORTHO05D006108 1.2e-09 67.8 95 43.2
FAN09G1969 Fragaria x ananassa HOM05D006485 ORTHO05D006108 1.7e-08 63.9 90 45.6
CSS0031113 Camellia sinensis var. sinensis HOM05D006485 ORTHO05D006108 1.8e-07 60.5 113 36.3
Sp4g18920 Schrenkiella parvula HOM05D006485 ORTHO05D006108 2.4e-07 60.1 59 59.3
PGR142G2869 Punica granatum HOM05D011389 ORTHO05D006108 4.1e-07 59.3 130 32.3
BcaB06g28954 Brassica carinata HOM05D006485 ORTHO05D006108 9.1e-07 58.2 67 49.3
BolC4t28034H Brassica oleracea HOM05D006485 ORTHO05D006108 9.1e-07 58.2 67 49.3
CiPaw.10G003000 Carya illinoinensis HOM05D006485 ORTHO05D006108 9.1e-07 58.2 128 35.9
A05p09230 Brassica napus HOM05D006485 ORTHO05D006108 1.2e-06 57.8 106 34.9
FAN05G3442 Fragaria x ananassa HOM05D006485 ORTHO05D006108 1.2e-06 57.8 86 41.9
Nitab4.5_0000680g0110 Nicotiana tabacum HOM05D006485 ORTHO05D006108 1.2e-06 57.8 108 40.7
FAN05G4746 Fragaria x ananassa HOM05D006485 ORTHO05D006108 1.6e-06 57.4 84 44.0
FAN09G4412 Fragaria x ananassa HOM05D006485 ORTHO05D006108 1.6e-06 57.4 90 42.2
CAN.G824.55 Capsicum annuum HOM05D006485 ORTHO05D006108 3.5e-06 56.2 89 42.7
MD09G1267600 Malus domestica HOM05D006485 ORTHO05D006108 3.5e-06 56.2 64 50.0
Cc06_g04960 Coffea canephora HOM05D011389 ORTHO05D006108 4.5e-06 55.8 228 26.8
FvH4_6g17400 Fragaria vesca HOM05D006485 ORTHO05D006108 4.5e-06 55.8 88 42.0
FAN14G0187 Fragaria x ananassa HOM05D006485 ORTHO05D006108 4.5e-06 55.8 88 42.0
BcaC02g07584 Brassica carinata HOM05D006485 ORTHO05D006108 7.7e-06 55.1 101 36.6
BcaC02g11777 Brassica carinata HOM05D006485 ORTHO05D006108 7.7e-06 55.1 95 34.7
BolC4t22800H Brassica oleracea HOM05D006485 ORTHO05D006108 7.7e-06 55.1 95 34.7
Thhalv10017525m.g Eutrema salsugineum HOM05D006485 ORTHO05D006108 7.7e-06 55.1 102 37.3


User provided reference genes

Program Settings