Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 2.6e-158 562.0 277 100.0
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 7.4e-158 560.5 277 99.6
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 6.1e-152 540.8 277 96.4
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 8.0e-136 487.3 284 85.9
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 5.4e-132 474.6 294 85.0
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 7.0e-132 474.2 293 84.6
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 1.0e-130 470.3 288 85.1
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.1e-111 407.1 287 72.8
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 2.3e-111 406.0 287 72.8
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 3.4e-110 402.1 285 73.0
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 1.4e-108 396.7 282 73.4
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 9.2e-108 394.0 282 73.4
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 2.1e-107 392.9 228 84.6
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 3.5e-107 392.1 285 71.2
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 2.3e-106 389.4 286 72.0
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 2.3e-106 389.4 281 73.0
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 8.6e-106 387.5 233 83.3
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 1.9e-105 386.3 267 74.5
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.9e-105 386.3 258 76.4
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 2.5e-105 386.0 268 73.9
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 3.3e-105 385.6 229 83.4
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 4.3e-105 385.2 229 82.5
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 5.6e-105 384.8 282 72.3
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 5.6e-105 384.8 269 73.6
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 1.2e-104 383.6 256 75.4
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 1.6e-104 383.3 234 81.2
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 1.6e-104 383.3 273 73.6
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 2.1e-104 382.9 287 70.7
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 2.8e-104 382.5 279 71.7
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 3.6e-104 382.1 229 82.5
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 3.6e-104 382.1 260 74.6
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 6.2e-104 381.3 233 81.5
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 6.2e-104 381.3 224 84.4
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 8.1e-104 380.9 231 80.5
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 1.1e-103 380.6 229 82.5
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 1.1e-103 380.6 270 73.0
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 1.1e-103 380.6 226 82.3
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 1.4e-103 380.2 284 70.4
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 1.8e-103 379.8 283 70.7
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 1.8e-103 379.8 283 70.7
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 1.8e-103 379.8 230 80.9
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 1.8e-103 379.8 215 86.0
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.8e-103 379.8 257 75.9
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 3.1e-103 379.0 267 72.3
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 4.0e-103 378.6 236 78.8
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 5.2e-103 378.3 235 80.0
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 1.5e-102 376.7 268 73.5
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 2.0e-102 376.3 289 69.2
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 2.6e-102 375.9 343 62.4
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 3.4e-102 375.6 291 68.7
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 3.4e-102 375.6 255 73.7
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 4.4e-102 375.2 227 81.9
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 4.4e-102 375.2 238 78.2
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 5.8e-102 374.8 233 79.4
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 5.8e-102 374.8 228 80.7
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 5.8e-102 374.8 227 82.4
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 7.6e-102 374.4 298 68.1
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 9.9e-102 374.0 236 79.2
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 9.9e-102 374.0 236 79.2
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 9.9e-102 374.0 268 73.1
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 1.7e-101 373.2 260 72.3
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 1.7e-101 373.2 236 79.7
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 2.2e-101 372.9 228 80.7
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 2.2e-101 372.9 232 80.2
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 2.9e-101 372.5 324 65.1
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 2.9e-101 372.5 230 83.0
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 2.9e-101 372.5 292 68.5
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 4.9e-101 371.7 228 80.7
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 4.9e-101 371.7 278 69.4
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 8.4e-101 370.9 270 70.0
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 8.4e-101 370.9 225 81.3
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 1.4e-100 370.2 289 68.9
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 3.2e-100 369.0 233 79.8
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 3.2e-100 369.0 279 69.2
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 4.1e-100 368.6 233 78.5
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 4.1e-100 368.6 256 75.0
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 5.4e-100 368.2 235 77.0
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 2.1e-99 366.3 233 78.5
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 2.1e-99 366.3 235 77.4
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 6.0e-99 364.8 234 77.4
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 5.1e-98 361.7 273 69.2
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 8.6e-98 360.9 272 70.2
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.1e-97 360.5 226 79.2
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.5e-97 360.1 249 73.1
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.5e-97 360.1 249 73.1
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.3e-97 358.6 249 72.7
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 7.3e-97 357.8 235 75.3
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 7.3e-97 357.8 238 76.1
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 5.2e-95 351.7 267 67.8
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 2.0e-94 349.7 369 56.1
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 2.0e-94 349.7 241 72.6
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 4.4e-94 348.6 301 62.1
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 9.9e-94 347.4 279 67.7
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 3.8e-93 345.5 206 82.0
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 1.4e-92 343.6 227 73.6
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 1.9e-92 343.2 228 73.2
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 9.9e-86 320.9 256 63.7
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 3.8e-85 318.9 234 68.4
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 1.4e-84 317.0 296 60.1
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 1.9e-81 306.6 266 62.8
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.1e-79 300.8 199 76.9
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 3.4e-78 295.8 214 76.2
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 2.4e-76 289.7 232 61.2
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 8.7e-74 281.2 205 63.4
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 1.8e-71 273.5 202 63.9
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 8.4e-69 264.6 166 77.1
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 1.5e-65 253.8 202 61.4
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.9e-65 253.4 164 76.2
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 6.3e-40 168.7 298 40.6
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 2.1e-35 153.7 176 52.3
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 1.3e-32 144.4 180 42.2
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.8e-31 140.6 92 78.3
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 5.9e-30 135.6 121 50.4
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 2.2e-29 133.7 122 60.7
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 6.5e-29 132.1 92 75.0
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.4e-26 124.4 159 40.9
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 1.4e-23 114.4 135 43.7
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 8.9e-10 68.6 80 46.2
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.2e-06 58.2 75 49.3


User provided reference genes

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