Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g031970.2 Solanum lycopersicum HOM05D008742 ORTHO05D010377 7.4e-155 550.4 268 100.0
Sopen11g014500 Solanum pennellii HOM05D008742 ORTHO05D010377 4.0e-148 528.1 269 97.0
PGSC0003DMG400031182 Solanum tuberosum HOM05D008742 ORTHO05D010377 3.8e-135 485.0 269 88.8
Nitab4.5_0001359g0010 Nicotiana tabacum HOM05D008742 ORTHO05D010377 7.5e-115 417.5 269 77.0
Nitab4.5_0001278g0110 Nicotiana tabacum HOM05D008742 ORTHO05D010377 4.9e-114 414.8 268 75.7
Peaxi162Scf00688g00019 Petunia axillaris HOM05D008742 ORTHO05D010377 6.0e-96 354.8 270 67.4
MSTRG.25490 Avicennia marina HOM05D008742 ORTHO05D010377 7.2e-57 224.9 276 47.8
TAR628G0950 Trochodendron aralioides HOM05D008742 ORTHO05D010377 3.0e-55 219.5 254 50.0
Potri.013G102300 Populus trichocarpa HOM05D008742 ORTHO05D010377 3.3e-54 216.1 261 46.4
Aqoxy6G00073 Aquilegia oxysepala HOM05D008742 ORTHO05D010377 1.1e-52 211.1 279 43.7
SalBow7G3290 Salvia bowleyana HOM05D008742 ORTHO05D010377 1.2e-51 207.6 274 45.6
QL10p026828 Quercus lobata HOM05D008742 ORTHO05D010377 2.2e-50 203.4 251 45.4
Manes.18G121000 Manihot esculenta HOM05D008742 ORTHO05D010377 2.5e-49 199.9 289 42.6
Ciclev10021221m.g Citrus clementina HOM05D008742 ORTHO05D010377 3.6e-48 196.1 325 40.6
CiPaw.03G017300 Carya illinoinensis HOM05D008742 ORTHO05D010377 1.0e-47 194.5 286 43.4
PGR042G1068 Punica granatum HOM05D008742 ORTHO05D010377 2.6e-46 189.9 283 38.5
Cfa008115 Carpinus fangiana HOM05D008742 ORTHO05D010377 2.2e-45 186.8 257 43.6
Gohir.D13G122200 Gossypium hirsutum HOM05D008742 ORTHO05D010377 4.5e-43 179.1 236 41.9
CANSAT25G0509 Cannabis sativa HOM05D008742 ORTHO05D010377 1.3e-42 177.6 293 39.2
Gorai.013G136900 Gossypium raimondii HOM05D008742 ORTHO05D010377 3.2e-41 172.9 237 41.8
Thecc.08G171700 Theobroma cacao HOM05D008742 ORTHO05D010377 5.5e-41 172.2 227 43.2
MBI03_g14517_MAGBIO Magnolia biondii HOM05D008742 ORTHO05D010377 2.1e-40 170.2 226 43.8
Sabra13G0088400 Salix brachista HOM05D008742 ORTHO05D010377 4.7e-40 169.1 315 36.5
Cc10_g16420 Coffea canephora HOM05D008742 ORTHO05D010377 6.1e-40 168.7 241 46.5
Gohir.A13G118401 Gossypium hirsutum HOM05D008742 ORTHO05D010377 6.1e-40 168.7 240 40.4
ATR1136G217 Amborella trichopoda HOM05D008742 ORTHO05D010377 1.0e-39 167.9 223 43.5
Eucgr.F02959 Eucalyptus grandis HOM05D008742 ORTHO05D010377 3.0e-39 166.4 223 43.9
Migut.C01345 Erythranthe guttata HOM05D008742 ORTHO05D010377 3.3e-38 162.9 288 39.9
GSVIVG01025912001 Vitis vinifera HOM05D008742 ORTHO05D010377 2.2e-37 160.2 236 44.1
PSO170G1705 Papaver somniferum HOM05D008742 ORTHO05D010377 1.6e-35 154.1 257 40.1
PSO782G1932 Papaver somniferum HOM05D008742 ORTHO05D010377 2.2e-34 150.2 255 41.6
ClCG08G000630 Citrullus lanatus HOM05D008742 ORTHO05D010377 3.2e-33 146.4 224 40.6
CsaV3_5G040230 Cucumis sativus L. HOM05D008742 ORTHO05D010377 2.3e-31 140.2 222 40.1
MELO3C022199.2 Cucumis melo HOM05D008742 ORTHO05D010377 1.2e-30 137.9 224 39.7
TWI59G0981 Tripterygium wilfordii HOM05D008742 ORTHO05D010377 1.6e-27 127.5 136 44.9
Cpa.g.sc21.53 Carica papaya HOM05D008742 ORTHO05D010377 5.0e-26 122.5 202 38.1
CDE07G1611 Ceratophyllum demersum HOM05D008742 ORTHO05D010377 2.0e-22 110.5 252 31.0
THA.LOC104815909 Tarenaya hassleriana HOM05D012304 ORTHO05D010377 2.0e-22 110.5 248 30.2
Dinv41793 Davidia involucrata HOM05D008742 ORTHO05D010377 2.8e-21 106.7 129 47.3
Haze_13917 Corylus avellana HOM05D008742 ORTHO05D010377 1.8e-20 104.0 107 51.4
AL6G43670 Arabidopsis lyrata HOM05D012304 ORTHO05D010377 1.8e-15 87.4 250 30.4
Duzib177G0721 Durio zibethinus HOM05D008742 ORTHO05D010377 8.9e-15 85.1 82 48.8
Sed0018339 Sechium edule HOM05D008742 ORTHO05D010377 8.9e-15 85.1 189 33.3
AT4G09970 Arabidopsis thaliana HOM05D012304 ORTHO05D010377 3.7e-13 79.7 245 27.3
Aa31LG9G12020 Aethionema arabicum HOM05D012304 ORTHO05D010377 9.2e-12 75.1 214 29.0
Thhalv10028904m.g Eutrema salsugineum HOM05D012304 ORTHO05D010377 2.0e-11 73.9 233 26.6
Carub.0006s2851 Capsella rubella HOM05D012304 ORTHO05D010377 5.9e-11 72.4 238 26.5
SGA_v2.0_scaffold24G10618 Striga asiatica HOM05D000065 ORTHO05D000162 1.0e-10 71.6 109 44.0
Migut.C01342 Erythranthe guttata HOM05D008742 ORTHO05D010377 9.5e-09 65.1 107 45.8
SMO236G0128 Selaginella moellendorffii HOM05D008742 ORTHO05D010377 3.6e-08 63.2 224 25.9
BcaB05g23938 Brassica carinata HOM05D012304 ORTHO05D010377 6.1e-08 62.4 262 24.0
Mapoly0060s0075 Marchantia polymorpha HOM05D020309 ORTHO05D010377 1.4e-07 61.2 292 23.3
CARHR260950 Cardamine hirsuta HOM05D012304 ORTHO05D010377 6.8e-07 58.9 110 29.1
Duzib177G0864 Durio zibethinus HOM05D008742 ORTHO05D010377 1.5e-06 57.8 67 41.8
Pp3c3_11780 Physcomitrium patens HOM05D020309 ORTHO05D010377 1.5e-06 57.8 270 23.3
A02p26830 Brassica napus HOM05D012304 ORTHO05D010377 2.6e-06 57.0 109 30.3
BraA02t07692Z Brassica rapa HOM05D012304 ORTHO05D010377 2.6e-06 57.0 109 30.3
BolSC33t60634H Brassica oleracea HOM05D012304 ORTHO05D010377 5.8e-06 55.8 110 30.9


User provided reference genes

Program Settings