Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g028310.3 Solanum lycopersicum HOM05D004763 ORTHO05D026177 1.5e-68 262.7 132 100.0
CAN.G646.1 Capsicum annuum HOM05D004763 ORTHO05D007492 2.4e-21 105.9 62 88.7
Sopen01g009200 Solanum pennellii HOM05D004763 ORTHO05D007492 3.1e-21 105.5 62 88.7
PGSC0003DMG401029907 Solanum tuberosum HOM05D004763 ORTHO05D007492 3.1e-21 105.5 62 88.7
Solyc01g014490.4 Solanum lycopersicum HOM05D004763 ORTHO05D007492 6.9e-21 104.4 62 87.1
Nitab4.5_0003069g0050 Nicotiana tabacum HOM05D004763 ORTHO05D007492 1.7e-19 99.8 62 82.3
Nitab4.5_0006575g0020 Nicotiana tabacum HOM05D004763 ORTHO05D007492 1.7e-19 99.8 62 82.3
Peaxi162Scf00773g00119 Petunia axillaris HOM05D004763 ORTHO05D007492 1.9e-18 96.3 62 80.6
CSS0044360 Camellia sinensis var. sinensis HOM05D004763 ORTHO05D007492 1.4e-16 90.1 63 77.8
Nn7g36058 Nelumbo nucifera HOM05D004763 ORTHO05D007492 1.8e-16 89.7 63 74.6
Ciclev10014511m.g Citrus clementina HOM05D004763 ORTHO05D007492 2.3e-16 89.4 63 74.6
Lsat_1_v5_gn_2_101121 Lactuca sativa HOM05D004763 ORTHO05D007492 2.3e-16 89.4 68 70.6
Glyma.13G342900 Glycine max HOM05D004763 ORTHO05D007492 6.7e-16 87.8 63 74.6
HanXRQChr14g0451781 Helianthus annuus HOM05D004763 ORTHO05D007492 6.7e-16 87.8 63 73.0
TAR623G1126 Trochodendron aralioides HOM05D004763 ORTHO05D007492 8.8e-16 87.4 63 74.6
Medtr2g098510 Medicago truncatula HOM05D004763 ORTHO05D007492 1.5e-15 86.7 63 73.0
Rhsim01G0189300 Rhododendron simsii HOM05D004763 ORTHO05D007492 1.5e-15 86.7 65 72.3
Eucgr.B03662 Eucalyptus grandis HOM05D004763 ORTHO05D007492 2.0e-15 86.3 63 74.6
Thecc.09G223100 Theobroma cacao HOM05D004763 ORTHO05D007492 2.0e-15 86.3 63 74.6
GSVIVG01025336001 Vitis vinifera HOM05D004763 ORTHO05D007492 2.0e-15 86.3 63 73.0
ECA238G4453 Erigeron canadensis HOM05D004763 ORTHO05D007492 2.6e-15 85.9 63 73.0
Cc01_g04070 Coffea canephora HOM05D004763 ORTHO05D007492 3.3e-15 85.5 63 71.4
Dinv36304 Davidia involucrata HOM05D004763 ORTHO05D007492 3.3e-15 85.5 61 75.4
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 3.3e-15 85.5 63 71.4
ClCG02G023620 Citrullus lanatus HOM05D004763 ORTHO05D007492 4.4e-15 85.1 63 73.0
Manes.14G014500 Manihot esculenta HOM05D004763 ORTHO05D007492 4.4e-15 85.1 63 71.4
HPP92_020536 Vanilla planifolia HOM05D004763 ORTHO05D007492 5.7e-15 84.7 63 68.3
Actinidia39377 Actinidia chinensis HOM05D004763 ORTHO05D007492 7.4e-15 84.3 63 73.0
Gohir.A13G215400 Gossypium hirsutum HOM05D004763 ORTHO05D007492 7.4e-15 84.3 63 71.4
Gohir.D13G219100 Gossypium hirsutum HOM05D004763 ORTHO05D007492 7.4e-15 84.3 63 71.4
Gorai.013G250000 Gossypium raimondii HOM05D004763 ORTHO05D007492 7.4e-15 84.3 63 71.4
Lalb_Chr14g0372291 Lupinus albus HOM05D004763 ORTHO05D007492 7.4e-15 84.3 63 71.4
QL01p006243 Quercus lobata HOM05D004763 ORTHO05D007492 7.4e-15 84.3 63 73.0
THA.LOC104816912 Tarenaya hassleriana HOM05D004763 ORTHO05D007492 7.4e-15 84.3 63 71.4
MELO3C014639.2 Cucumis melo HOM05D004763 ORTHO05D007492 9.7e-15 84.0 63 71.4
CsaV3_4G023800 Cucumis sativus L. HOM05D004763 ORTHO05D007492 9.7e-15 84.0 63 71.4
Duzib150G1218 Durio zibethinus HOM05D004763 ORTHO05D007492 9.7e-15 84.0 63 71.4
RcHm_v2.0_Chr5g0078101 Rosa chinensis HOM05D004763 ORTHO05D007492 9.7e-15 84.0 63 69.8
Sc09g0000480 Simmondsia chinensis HOM05D004763 ORTHO05D007492 9.7e-15 84.0 63 73.0
Cpa.g.sc84.111 Carica papaya HOM05D004763 ORTHO05D007492 1.3e-14 83.6 63 71.4
COL.COLO4_09893 Corchorus olitorius HOM05D004763 ORTHO05D007492 1.3e-14 83.6 63 71.4
Psat5g288480 Pisum sativum HOM05D004763 ORTHO05D007492 1.3e-14 83.6 63 69.8
Atru.chr3.2503 Acer truncatum HOM05D004763 ORTHO05D007492 1.7e-14 83.2 63 71.4
Sabra03G0153800 Salix brachista HOM05D004763 ORTHO05D007492 1.7e-14 83.2 63 69.8
Sabra03G0156000 Salix brachista HOM05D004763 ORTHO05D007492 1.7e-14 83.2 63 69.8
FvH4_3g43550 Fragaria vesca HOM05D004763 ORTHO05D007492 2.2e-14 82.8 63 69.8
FAN11G0713 Fragaria x ananassa HOM05D004763 ORTHO05D007492 2.2e-14 82.8 63 69.8
FAN11G2145 Fragaria x ananassa HOM05D004763 ORTHO05D007492 2.2e-14 82.8 63 69.8
arahy.Tifrunner.gnm1.ann1.GN3GFY Arachis hypogaea HOM05D004763 ORTHO05D007492 2.8e-14 82.4 63 69.8
arahy.Tifrunner.gnm1.ann1.P0K6XU Arachis hypogaea HOM05D004763 ORTHO05D007492 2.8e-14 82.4 63 69.8
arahy.Tifrunner.gnm1.ann1.VYK1P0 Arachis hypogaea HOM05D004763 ORTHO05D007492 2.8e-14 82.4 63 69.8
arahy.Tifrunner.gnm1.ann1.X75IXN Arachis hypogaea HOM05D004763 ORTHO05D007492 2.8e-14 82.4 63 69.8
MBI01_g15753_MAGBIO Magnolia biondii HOM05D004763 ORTHO05D007492 2.8e-14 82.4 63 69.8
FAN16G3272 Fragaria x ananassa HOM05D004763 ORTHO05D007492 3.7e-14 82.0 63 69.8
TWI34G0672 Tripterygium wilfordii HOM05D004763 ORTHO05D007492 3.7e-14 82.0 63 69.8
FAN21G2003 Fragaria x ananassa HOM05D004763 ORTHO05D007492 4.8e-14 81.6 61 70.5
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 6.3e-14 81.3 63 69.8
CiPaw.14G125100 Carya illinoinensis HOM05D004763 ORTHO05D007492 8.2e-14 80.9 63 68.3
Os09g0279600 Oryza sativa ssp. japonica HOM05D004763 ORTHO05D007492 8.2e-14 80.9 62 67.7
Prupe.6G018600 Prunus persica HOM05D004763 ORTHO05D007492 8.2e-14 80.9 62 62.9
Haze_23044 Corylus avellana HOM05D004763 ORTHO05D007492 1.1e-13 80.5 63 66.7
MD03G1021100 Malus domestica HOM05D004763 ORTHO05D007492 1.1e-13 80.5 63 68.3
CANSAT54G1729 Cannabis sativa HOM05D004763 ORTHO05D007492 1.4e-13 80.1 63 66.7
DCAR_024396 Daucus carota HOM05D004763 ORTHO05D007492 1.4e-13 80.1 63 68.3
Hma1.2p1_1169F.1_g263300 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 1.4e-13 80.1 63 69.8
Potri.003G211000 Populus trichocarpa HOM05D004763 ORTHO05D007492 1.4e-13 80.1 63 66.7
Potri.T085401 Populus trichocarpa HOM05D004763 ORTHO05D007492 1.4e-13 80.1 63 66.7
Sed0013957 Sechium edule HOM05D004763 ORTHO05D007492 1.4e-13 80.1 63 68.3
Phvul.005G150500 Phaseolus vulgaris HOM05D004763 ORTHO05D007492 1.8e-13 79.7 63 68.3
Lj3g0020649 Lotus japonicus HOM05D004763 ORTHO05D007492 2.4e-13 79.3 63 68.3
Lj4g0010878 Lotus japonicus HOM05D004763 ORTHO05D007492 2.4e-13 79.3 63 68.3
PGR102G0325 Punica granatum HOM05D004763 ORTHO05D007492 2.4e-13 79.3 63 68.3
Hund22081 Selenicereus undatus HOM05D004763 ORTHO05D007492 3.1e-13 79.0 63 68.3
Aqoxy1G00185 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 5.3e-13 78.2 63 66.7
Aqoxy381s001 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 5.3e-13 78.2 63 66.7
AL3G34700 Arabidopsis lyrata HOM05D004763 ORTHO05D007492 5.3e-13 78.2 63 66.7
AT3G20780 Arabidopsis thaliana HOM05D004763 ORTHO05D007492 5.3e-13 78.2 63 66.7
BraA05t21683Z Brassica rapa HOM05D004763 ORTHO05D007492 5.3e-13 78.2 65 64.6
Carub.0003s2074 Capsella rubella HOM05D004763 ORTHO05D007492 5.3e-13 78.2 63 66.7
CARHR096610 Cardamine hirsuta HOM05D004763 ORTHO05D007492 5.3e-13 78.2 63 66.7
PSO339G3791 Papaver somniferum HOM05D004763 ORTHO05D007492 5.3e-13 78.2 63 68.3
SGA_v2.0_scaffold1G00797 Striga asiatica HOM05D004763 ORTHO05D007492 5.3e-13 78.2 62 69.4
BcaB06g26148 Brassica carinata HOM05D004763 ORTHO05D007492 7.0e-13 77.8 63 66.7
BcaC05g28282 Brassica carinata HOM05D004763 ORTHO05D007492 7.0e-13 77.8 63 66.7
A05p28000 Brassica napus HOM05D004763 ORTHO05D007492 7.0e-13 77.8 63 66.7
BolC5t33062H Brassica oleracea HOM05D004763 ORTHO05D007492 7.0e-13 77.8 63 66.7
Thhalv10020214m.g Eutrema salsugineum HOM05D004763 ORTHO05D007492 7.0e-13 77.8 63 66.7
AUR62019250 Chenopodium quinoa HOM05D004763 ORTHO05D007492 9.1e-13 77.4 63 68.3
Sp3g18800 Schrenkiella parvula HOM05D004763 ORTHO05D007492 1.2e-12 77.0 63 65.1
Migut.D00558 Erythranthe guttata HOM05D004763 ORTHO05D007492 1.6e-12 76.6 62 66.1
Aa31LG8G7590 Aethionema arabicum HOM05D004763 ORTHO05D007492 2.0e-12 76.3 101 50.5
TPR.G29742 Trifolium pratense HOM05D004763 ORTHO05D007492 2.0e-12 76.3 62 64.5
EL10Ac4g10318 Beta vulgaris HOM05D004763 ORTHO05D007492 3.5e-12 75.5 63 65.1
C05p43300 Brassica napus HOM05D004763 ORTHO05D007492 3.5e-12 75.5 63 63.5
Ah.04g161760 Amaranthus hybridus HOM05D004763 ORTHO05D007492 4.5e-12 75.1 63 65.1
Ca_01270_v3 Cicer arietinum L. HOM05D004763 ORTHO05D007492 5.9e-12 74.7 78 57.7
ATR0605G091 Amborella trichopoda HOM05D004763 ORTHO05D007492 1.3e-11 73.6 62 59.7
Lj1A366T12 Lonicera japonica HOM05D004763 ORTHO05D007492 1.3e-11 73.6 54 74.1
SEGI_32015 Sequoiadendron giganteum HOM05D004763 ORTHO05D007492 1.1e-10 70.5 63 61.9
CDE04G0998 Ceratophyllum demersum HOM05D004763 ORTHO05D007492 1.5e-10 70.1 63 63.5
PGSC0003DMG401017076 Solanum tuberosum HOM05D004763 ORTHO05D026177 5.5e-10 68.2 44 86.4
Mapoly0042s0060 Marchantia polymorpha HOM05D004763 ORTHO05D007492 7.2e-10 67.8 62 58.1
PGSC0003DMG402017076 Solanum tuberosum HOM05D004763 ORTHO05D026177 1.2e-09 67.0 47 83.0
AagrBONN_evm.TU.Sc2ySwM_344.3405 Anthoceros agrestis HOM05D004763 ORTHO05D007492 3.6e-09 65.5 63 58.7
SMO116G0144 Selaginella moellendorffii HOM05D004763 ORTHO05D007492 3.6e-09 65.5 63 57.1
CBR_g31022 Chara braunii HOM05D004763 ORTHO05D007492 8.0e-09 64.3 63 55.6
Pp3c22_12720 Physcomitrium patens HOM05D004763 ORTHO05D007492 2.3e-08 62.8 62 54.8
Lsat_1_v5_gn_1_127121 Lactuca sativa HOM05D004763 ORTHO05D007492 2.0e-07 59.7 52 61.5
PGSC0003DMG400026817 Solanum tuberosum HOM05D004763 ORTHO05D026177 2.6e-07 59.3 45 77.8
Lsat_1_v5_gn_1_126981 Lactuca sativa HOM05D004763 ORTHO05D007492 1.3e-06 57.0 52 61.5
Lsat_1_v5_gn_1_127001 Lactuca sativa HOM05D004763 ORTHO05D007492 6.3e-06 54.7 43 58.1


User provided reference genes

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