Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 8.9e-40 166.4 79 100.0
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 3.6e-17 91.3 55 78.2
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 3.6e-17 91.3 55 78.2
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 3.6e-17 91.3 55 78.2
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 3.6e-17 91.3 55 78.2
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 3.6e-17 91.3 55 78.2
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 1.1e-16 89.7 55 76.4
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 1.1e-16 89.7 55 78.2
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 1.1e-16 89.7 55 76.4
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 3.1e-16 88.2 55 76.4
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 4.0e-16 87.8 55 72.7
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 4.0e-16 87.8 55 70.9
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 9.0e-16 86.7 55 74.5
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 9.0e-16 86.7 55 74.5
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 9.0e-16 86.7 55 74.5
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 9.0e-16 86.7 55 74.5
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 9.0e-16 86.7 55 74.5
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 1.2e-15 86.3 55 72.7
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 1.2e-15 86.3 55 74.5
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 2.0e-15 85.5 55 74.5
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 2.6e-15 85.1 55 74.5
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 2.6e-15 85.1 55 74.5
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 2.6e-15 85.1 55 74.5
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 2.6e-15 85.1 55 74.5
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 2.6e-15 85.1 55 74.5
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 2.6e-15 85.1 55 74.5
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 2.6e-15 85.1 55 74.5
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 2.6e-15 85.1 55 74.5
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 2.6e-15 85.1 55 74.5
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 2.6e-15 85.1 55 74.5
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 2.6e-15 85.1 55 74.5
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 2.6e-15 85.1 55 74.5
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 3.4e-15 84.7 55 72.7
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 9.9e-15 83.2 55 70.9
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 9.9e-15 83.2 55 70.9
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 9.9e-15 83.2 55 70.9
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 2.2e-14 82.0 55 69.1
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 2.9e-14 81.6 52 75.0
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 2.9e-14 81.6 55 70.9
CAN.G331.1 Capsicum annuum HOM05D005573 ORTHO05D007161 3.8e-14 81.3 55 70.9
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 3.8e-14 81.3 55 69.1
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 4.9e-14 80.9 55 69.1
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 6.4e-14 80.5 55 70.9
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 8.4e-14 80.1 54 68.5
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 1.1e-13 79.7 55 70.9
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.2e-13 78.2 55 67.3
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 4.2e-13 77.8 55 67.3
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 5.4e-13 77.4 55 67.3
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 7.1e-13 77.0 55 65.5
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.2e-12 76.3 55 65.5
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 1.6e-12 75.9 54 64.8
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 3.5e-12 74.7 55 63.6
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 7.9e-12 73.6 55 65.5
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 7.9e-12 73.6 55 65.5
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 7.9e-12 73.6 55 65.5
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 7.9e-12 73.6 55 65.5
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 7.9e-12 73.6 55 65.5
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 1.0e-11 73.2 57 64.9
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 1.0e-11 73.2 57 64.9
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 1.3e-11 72.8 42 81.0
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 1.8e-11 72.4 49 67.3
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 2.3e-11 72.0 55 63.6
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 2.3e-11 72.0 55 63.6
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 2.3e-11 72.0 55 63.6
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 2.3e-11 72.0 55 63.6
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 2.3e-11 72.0 55 63.6
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 2.3e-11 72.0 55 63.6
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 2.3e-11 72.0 55 63.6
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 2.3e-11 72.0 55 63.6
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 2.3e-11 72.0 55 63.6
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 2.3e-11 72.0 55 63.6
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 2.3e-11 72.0 55 63.6
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 2.3e-11 72.0 55 67.3
HanXRQChr13g0413681 Helianthus annuus HOM05D005573 ORTHO05D029920 1.1e-10 69.7 44 70.5
HanXRQChr13g0413751 Helianthus annuus HOM05D005573 ORTHO05D029920 1.1e-10 69.7 44 70.5
HanXRQChr13g0413831 Helianthus annuus HOM05D005573 ORTHO05D029920 1.1e-10 69.7 44 70.5
HanXRQChr13g0413901 Helianthus annuus HOM05D005573 ORTHO05D029920 1.1e-10 69.7 44 70.5
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 1.5e-10 69.3 46 71.7
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 2.1e-09 65.5 38 73.7
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 4.8e-09 64.3 50 64.0
Nn055s41939 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.4e-08 62.0 36 77.8
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 4.0e-08 61.2 55 50.9
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 4.0e-08 61.2 55 50.9
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 4.0e-08 61.2 55 50.9
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 4.0e-08 61.2 55 50.9
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 4.0e-08 61.2 55 50.9
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 4.0e-08 61.2 55 50.9
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 4.0e-08 61.2 55 50.9
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 4.0e-08 61.2 55 50.9
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 5.3e-08 60.8 36 72.2
Oeu042745.1 Olea europaea HOM05D005573 ORTHO05D007161 4.9e-06 54.3 29 82.8


User provided reference genes

Program Settings