Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g022610.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 5.5e-56 220.7 110 100.0
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 6.6e-25 117.5 76 85.5
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 4.3e-24 114.8 76 84.2
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 4.3e-24 114.8 76 84.2
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 5.6e-24 114.4 76 82.9
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 9.5e-24 113.6 86 75.6
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.2e-23 113.2 76 80.3
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.2e-23 113.2 76 80.3
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-23 112.5 86 75.6
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-23 112.5 86 75.6
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-23 112.5 86 75.6
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-23 112.5 86 75.6
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-23 112.5 86 75.6
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-23 112.5 86 75.6
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-23 112.5 86 75.6
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 2.1e-23 112.5 86 75.6
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 4.7e-23 111.3 76 82.9
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 8.1e-23 110.5 76 81.6
Oeu062838.1 Olea europaea HOM05D005573 ORTHO05D007161 8.1e-23 110.5 75 80.0
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 1.4e-22 109.8 76 81.6
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.4e-22 109.0 90 70.0
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 3.1e-22 108.6 87 73.6
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 3.1e-22 108.6 87 73.6
C09p29560 Brassica napus HOM05D005573 ORTHO05D007161 3.1e-22 108.6 87 73.6
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 3.1e-22 108.6 87 73.6
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 3.1e-22 108.6 87 73.6
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 3.1e-22 108.6 87 73.6
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 3.1e-22 108.6 87 73.6
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 3.1e-22 108.6 87 73.6
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 3.1e-22 108.6 87 73.6
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 3.1e-22 108.6 87 73.6
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 3.1e-22 108.6 99 64.6
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 4.0e-22 108.2 75 81.3
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 4.0e-22 108.2 76 80.3
ClCG00G003940 Citrullus lanatus HOM05D005573 ORTHO05D007161 5.2e-22 107.8 76 78.9
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 5.2e-22 107.8 87 70.1
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 5.2e-22 107.8 87 72.4
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 5.2e-22 107.8 87 71.3
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 5.2e-22 107.8 87 71.3
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 6.8e-22 107.5 87 72.4
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 1.2e-21 106.7 87 72.4
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 1.2e-21 106.7 87 72.4
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 1.5e-21 106.3 76 78.9
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 2.0e-21 105.9 87 71.3
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 2.0e-21 105.9 87 71.3
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 2.0e-21 105.9 87 71.3
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 2.6e-21 105.5 86 70.9
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 4.4e-21 104.8 87 71.3
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 4.4e-21 104.8 76 80.3
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 4.4e-21 104.8 85 70.6
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 9.9e-21 103.6 87 69.0
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.8e-20 101.7 89 66.3
Lalb_Chr07g0191491 Lupinus albus HOM05D005573 ORTHO05D007161 1.1e-19 100.1 89 68.5
GSVIVG01021975001 Vitis vinifera HOM05D005573 ORTHO05D007161 2.4e-19 99.0 76 73.7
Nn071s42388 Nelumbo nucifera HOM05D005573 ORTHO05D007161 5.4e-19 97.8 79 70.9
Phvul.011G056580 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 7.1e-19 97.4 85 67.1
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 1.3e-17 93.2 71 76.1
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 1.3e-17 93.2 71 76.1
Gohir.A09G103300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.3e-17 92.4 93 62.4
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 3.0e-17 92.0 76 67.1
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 8.7e-17 90.5 75 73.3
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 1.1e-16 90.1 76 67.1
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 5.6e-16 87.8 76 65.8
Zm00001eb039100 Zea mays HOM05D005573 ORTHO05D007161 5.6e-16 87.8 76 65.8
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 5.6e-16 87.8 76 65.8
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 5.6e-16 87.8 76 65.8
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 5.6e-16 87.8 76 65.8
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 5.6e-16 87.8 76 65.8
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 5.6e-16 87.8 76 65.8
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 5.6e-16 87.8 76 65.8
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 5.2e-14 81.3 78 60.3
BolC9t56936H Brassica oleracea HOM05D005573 ORTHO05D007161 9.0e-14 80.5 58 75.9
SEGI_40009 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 9.0e-14 80.5 71 62.0
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 2.6e-13 79.0 50 84.0
Sc09g0006540 Simmondsia chinensis HOM05D005573 ORTHO05D005696 7.6e-13 77.4 61 70.5
Gohir.A09G045300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.2e-10 70.1 50 76.0
BolSC47t61119H Brassica oleracea HOM05D005573 ORTHO05D007161 1.5e-08 63.2 45 75.6
arahy.Tifrunner.gnm1.ann1.NT5R3P Arachis hypogaea HOM05D005573 ORTHO05D007161 7.3e-08 60.8 87 49.4
SMO086G0035 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 1.3e-07 60.1 77 49.4
SMO086G0038 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 1.3e-07 60.1 77 49.4
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 3.1e-06 55.5 34 88.2


User provided reference genes

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