Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g021300.2 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.1e-90 336.7 169 100.0
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 7.4e-84 313.9 169 94.1
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 7.4e-84 313.9 169 94.1
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 7.4e-84 313.9 169 94.1
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.0e-80 303.5 163 93.9
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.0e-80 303.5 163 93.9
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.0e-80 303.5 163 93.9
Solyc05g016220.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.7e-56 223.0 128 86.7
Nitab4.5_0000172g2280 Nicotiana tabacum HOM05D001070 ORTHO05D010233 6.5e-56 221.1 169 69.2
Solyc08g016000.2 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.5e-49 198.7 112 89.3
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 1.5e-44 183.3 169 60.9
Solyc02g011850.3 Solanum lycopersicum HOM05D001070 ORTHO05D010233 3.5e-41 172.2 112 77.7
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.0e-40 170.6 169 54.4
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 3.8e-40 168.7 169 53.3
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 8.6e-40 167.5 169 53.3
Peaxi162Scf01305g00039 Petunia axillaris HOM05D001070 ORTHO05D010233 1.2e-38 163.7 110 73.6
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 1.0e-37 160.6 170 51.2
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 2.8e-35 152.5 173 52.0
Peaxi162Scf00080g00515 Petunia axillaris HOM05D001070 ORTHO05D010233 3.5e-33 145.6 151 55.6
HanXRQChr00c0703g0576891 Helianthus annuus HOM05D001070 ORTHO05D002096 1.4e-29 133.7 138 52.2
HanXRQChr08g0222861 Helianthus annuus HOM05D001070 ORTHO05D002096 1.4e-29 133.7 138 52.2
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 1.8e-29 133.3 169 45.6
HanXRQChr15g0465401 Helianthus annuus HOM05D001070 ORTHO05D002096 1.8e-29 133.3 169 45.6
HanXRQChr15g0465501 Helianthus annuus HOM05D001070 ORTHO05D010233 1.8e-29 133.3 169 45.6
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 1.8e-29 133.3 169 45.6
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 1.8e-29 133.3 169 45.6
Nitab4.5_0000729g0030 Nicotiana tabacum HOM05D001070 ORTHO05D010233 1.4e-26 123.6 89 69.7
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 9.2e-26 120.9 170 43.5
Ciclev10014004m.g Citrus clementina HOM05D001070 ORTHO05D010233 3.9e-24 115.5 156 44.2
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.9e-24 115.5 156 44.2
Peaxi162Scf00080g00522 Petunia axillaris HOM05D001070 ORTHO05D022991 5.6e-23 111.7 95 62.1
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 9.5e-23 110.9 171 39.8
Oeu012762.2 Olea europaea HOM05D001070 ORTHO05D002096 3.6e-22 109.0 96 59.4
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 2.3e-21 106.3 141 44.0
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 2.3e-21 106.3 141 41.8
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 5.2e-21 105.1 144 43.8
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 6.8e-21 104.8 140 42.1
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 1.2e-20 104.0 140 41.4
C02p28780 Brassica napus HOM05D001070 ORTHO05D010233 1.5e-20 103.6 141 41.8
C09p25520 Brassica napus HOM05D001070 ORTHO05D010233 1.5e-20 103.6 141 41.8
BolSC35t60710H Brassica oleracea HOM05D001070 ORTHO05D002096 3.4e-20 102.4 141 41.8
HanXRQChr17g0557721 Helianthus annuus HOM05D001070 ORTHO05D002096 3.4e-20 102.4 96 55.2
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 7.5e-20 101.3 141 41.1
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 1.7e-19 100.1 178 37.6
Oeu012820.1 Olea europaea HOM05D000533 ORTHO05D002807 1.7e-19 100.1 136 45.6
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 1.2e-17 94.0 192 34.9
Gohir.A05G323700 Gossypium hirsutum HOM05D001070 ORTHO05D002096 7.8e-17 91.3 86 52.3
TAR365G0787 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.3e-16 90.5 80 55.0
Lju5009P0T37 Lonicera japonica HOM05D001070 ORTHO05D002096 3.0e-16 89.4 193 35.8
HanXRQChr00c0379g0574341 Helianthus annuus HOM05D001070 ORTHO05D002096 3.9e-16 89.0 82 56.1
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 7.3e-15 84.7 90 46.7
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 7.3e-15 84.7 90 46.7
C07p33490 Brassica napus HOM05D001070 ORTHO05D002096 6.2e-14 81.6 90 46.7
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 6.2e-14 81.6 169 35.5
Nn029s41579 Nelumbo nucifera HOM05D001070 ORTHO05D010233 6.8e-13 78.2 100 53.0
HPP92_028416 Vanilla planifolia HOM05D041394 ORTHO05D002096 1.4e-10 70.5 161 28.0
Nitab4.5_0004841g0070 Nicotiana tabacum HOM05D001070 ORTHO05D022991 2.7e-09 66.2 169 32.0
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 7.8e-09 64.7 94 40.4
Gohir.D01G134260 Gossypium hirsutum HOM05D001070 ORTHO05D010233 5.1e-08 62.0 79 44.3
Gohir.A04G053000 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.1e-06 56.6 67 44.8
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 2.1e-06 56.6 56 50.0


User provided reference genes

Program Settings