Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g021215.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 3.4e-135 485.0 238 100.0
BolSC35t60694H Brassica oleracea HOM05D001200 ORTHO05D002731 5.9e-79 298.1 232 70.3
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 2.0e-66 256.5 157 84.1
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 2.0e-66 256.5 157 84.1
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 2.0e-66 256.5 157 84.1
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 2.0e-66 256.5 157 84.1
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 2.6e-66 256.1 157 84.7
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 2.6e-66 256.1 157 84.7
HanXRQChr17g0557761 Helianthus annuus HOM05D001200 ORTHO05D002731 7.5e-66 254.6 157 83.4
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 2.2e-65 253.1 196 69.4
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 4.9e-65 251.9 149 88.6
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 8.3e-65 251.1 149 87.9
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 2.4e-64 249.6 149 86.6
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 2.4e-64 249.6 149 84.6
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 4.1e-64 248.8 166 81.9
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 5.9e-63 245.0 149 84.6
Hund08793 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund12716 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund12843 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund23968 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund27678 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund27755 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund27831 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund28438 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund28448 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 155 81.9
Hund28536 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund28587 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund28613 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund28880 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund28937 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund28946 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund28951 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund28954 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund28961 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund28979 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29026 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29089 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29109 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29186 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29244 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29247 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29251 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29254 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29261 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29273 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29277 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29281 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29285 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29288 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29316 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29438 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29453 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29499 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29654 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29713 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29755 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29814 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund29818 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund30036 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund30039 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund30120 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund30177 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund30365 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
Hund30388 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-62 243.4 158 81.0
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 8.6e-62 241.1 157 79.0
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 1.5e-61 240.4 149 82.6
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 3.3e-61 239.2 149 82.6
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 1.4e-59 233.8 148 81.1
BolSC46t60960H Brassica oleracea HOM05D001200 ORTHO05D002731 1.4e-59 233.8 148 81.1
BolSC47t61066H Brassica oleracea HOM05D001200 ORTHO05D002731 1.4e-59 233.8 148 81.1
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 1.4e-59 233.8 148 81.1
BraSC59t46528Z Brassica rapa HOM05D001200 ORTHO05D002731 1.4e-59 233.8 148 81.1
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 1.4e-59 233.8 148 81.1
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 6.8e-59 231.5 149 80.5
BraSC103t45427Z Brassica rapa HOM05D001200 ORTHO05D002731 3.7e-57 225.7 180 68.3
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 7.0e-56 221.5 148 78.4
Hund28596 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.2e-55 220.7 142 81.0
Hund30513 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-54 216.9 128 87.5
Lalb_Chr07g0191761 Lupinus albus HOM05D001200 ORTHO05D002731 1.1e-51 207.6 150 76.0
Hund27631 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.3e-49 200.7 129 80.6
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 7.8e-47 191.4 149 71.1
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 3.9e-46 189.1 149 70.5
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 1.9e-45 186.8 157 66.9
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 1.9e-45 186.8 157 66.9
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 4.7e-44 182.2 101 93.1
Migut.D01520 Erythranthe guttata HOM05D001200 ORTHO05D002731 6.8e-43 178.3 101 89.1
Ciclev10010880m.g Citrus clementina HOM05D001200 ORTHO05D002731 4.4e-42 175.6 112 80.4
Nitab4.5_0010611g0010 Nicotiana tabacum HOM05D001200 ORTHO05D002731 1.3e-41 174.1 112 77.7
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 3.7e-41 172.6 149 66.4
Thhalv10017742m.g Eutrema salsugineum HOM05D001200 ORTHO05D002731 4.1e-40 169.1 166 60.8
HanXRQChr00c0328g0573611 Helianthus annuus HOM05D001200 ORTHO05D002731 4.1e-40 169.1 130 70.8
Medtr7g075220 Medicago truncatula HOM05D000504 ORTHO05D002731 4.1e-40 169.1 151 67.5
HanXRQChr00c0703g0576951 Helianthus annuus HOM05D001200 ORTHO05D002731 5.4e-40 168.7 147 65.3
Hund29434 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.0e-39 165.2 110 78.2
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 1.7e-38 163.7 104 78.8
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 8.6e-38 161.4 104 77.9
Hund27883 Selenicereus undatus HOM05D001200 ORTHO05D002731 8.6e-38 161.4 92 89.1
Lalb_Chr13g0292821 Lupinus albus HOM05D001200 ORTHO05D002731 2.6e-34 149.8 105 73.3
RcHm_v2.0_CPg0502791 Rosa chinensis HOM05D001200 ORTHO05D002731 8.4e-33 144.8 84 86.9
GSVIVG01023768001 Vitis vinifera HOM05D001200 ORTHO05D002731 2.4e-32 143.3 107 69.2
Ciclev10013970m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.5e-31 139.4 90 77.8
Ciclev10013975m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.5e-31 139.4 90 77.8
Ciclev10027651m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.5e-31 139.4 90 77.8
Ciclev10030458m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.5e-31 139.4 90 77.8
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 6.0e-31 138.7 123 61.0
SMO086G0020 Selaginella moellendorffii HOM05D001200 ORTHO05D002731 1.0e-30 137.9 172 48.3
Ciclev10027632m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.9e-29 133.7 106 66.0
Hund28974 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.9e-29 133.7 91 75.8
Gohir.D08G035150 Gossypium hirsutum HOM05D001200 ORTHO05D002731 4.7e-28 129.0 120 59.2
Lalb_Chr19g0127741 Lupinus albus HOM05D001200 ORTHO05D002731 6.9e-27 125.2 82 80.5
Nitab4.5_0002738g0110 Nicotiana tabacum HOM05D001200 ORTHO05D002731 7.6e-26 121.7 146 50.7
BolC2t08908H Brassica oleracea HOM05D001200 ORTHO05D002731 9.9e-26 121.3 82 73.2
Solyc10g047420.3 Solanum lycopersicum HOM05D001200 ORTHO05D002731 1.3e-25 120.9 72 83.3
Solyc11g044600.2 Solanum lycopersicum HOM05D001200 ORTHO05D002731 9.3e-24 114.8 71 84.5
MBI10_g47590_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 7.8e-23 111.7 183 42.6
MBI10_g47593_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 7.8e-23 111.7 183 42.6
TPR.G24771 Trifolium pratense HOM05D001200 ORTHO05D002731 1.3e-22 110.9 134 47.0
C09p39280 Brassica napus HOM05D001200 ORTHO05D002731 3.9e-22 109.4 120 54.2
Gorai.004G033100 Gossypium raimondii HOM05D001200 ORTHO05D002731 5.1e-22 109.0 99 59.6
Gohir.A01G139671 Gossypium hirsutum HOM05D001200 ORTHO05D002731 1.5e-21 107.5 94 64.9
Solyc11g044647.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 3.3e-21 106.3 68 82.4
HanXRQChr00c0289g0573131 Helianthus annuus HOM05D001200 ORTHO05D002731 7.3e-21 105.1 60 88.3
BolC6t36211H Brassica oleracea HOM05D001200 ORTHO05D002731 1.3e-20 104.4 176 43.8
BolC6t36208H Brassica oleracea HOM05D001200 ORTHO05D002731 2.8e-20 103.2 65 83.1
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 8.1e-20 101.7 76 69.7
BolSC44t60820H Brassica oleracea HOM05D001200 ORTHO05D002731 3.1e-19 99.8 162 43.2
Migut.D01384 Erythranthe guttata HOM05D001200 ORTHO05D002731 1.2e-18 97.8 104 55.8
HanXRQChr08g0211961 Helianthus annuus HOM05D001200 ORTHO05D002731 5.8e-18 95.5 53 88.7
Gorai.013G108500 Gossypium raimondii HOM05D001200 ORTHO05D002731 6.4e-17 92.0 79 60.8
Gohir.D03G063001 Gossypium hirsutum HOM05D001200 ORTHO05D002731 3.2e-16 89.7 68 67.6
BolSC29t60544H Brassica oleracea HOM05D001200 ORTHO05D002731 2.1e-15 87.0 83 56.6
CAN.G108.6 Capsicum annuum HOM05D001200 ORTHO05D002731 3.5e-15 86.3 46 93.5
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 3.5e-15 86.3 74 52.7
BolC9t55377H Brassica oleracea HOM05D001200 ORTHO05D002731 6.0e-15 85.5 54 74.1
Migut.D01254 Erythranthe guttata HOM05D001200 ORTHO05D002731 6.0e-15 85.5 48 89.6
Lsat_1_v5_gn_6_54081 Lactuca sativa HOM05D001200 ORTHO05D002731 2.5e-13 80.1 70 64.3
HanXRQChr12g0383551 Helianthus annuus HOM05D001200 ORTHO05D002731 7.4e-13 78.6 107 45.8
arahy.Tifrunner.gnm1.ann1.FIPJ9G Arachis hypogaea HOM05D001200 ORTHO05D002731 2.8e-12 76.6 43 90.7
BraSC143t45662Z Brassica rapa HOM05D001200 ORTHO05D002731 8.1e-12 75.1 108 46.3
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 8.1e-12 75.1 42 90.5
GSVIVG01016016001 Vitis vinifera HOM05D001200 ORTHO05D049435 5.3e-11 72.4 53 66.0
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 1.2e-10 71.2 50 70.0
HanXRQChr08g0211971 Helianthus annuus HOM05D001200 ORTHO05D002731 1.5e-10 70.9 50 72.0
Hund29433 Selenicereus undatus HOM05D001200 ORTHO05D009713 7.6e-10 68.6 39 87.2
TPR.G28924 Trifolium pratense HOM05D001200 ORTHO05D002731 7.6e-10 68.6 44 79.5
TPR.G7852 Trifolium pratense HOM05D001200 ORTHO05D002731 1.0e-09 68.2 43 72.1
Aa31LG5G21700 Aethionema arabicum HOM05D001200 ORTHO05D002731 2.2e-09 67.0 182 34.6
CsaV3_UNG210140 Cucumis sativus L. HOM05D001200 ORTHO05D002731 2.9e-09 66.6 42 73.8
Hund28850 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.9e-09 66.6 50 66.0
Hund29179 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.9e-09 66.6 50 66.0
BolC2t10594H Brassica oleracea HOM05D001200 ORTHO05D002731 6.4e-09 65.5 38 86.8
Lalb_Chr13g0292801 Lupinus albus HOM05D001200 ORTHO05D002731 6.4e-09 65.5 46 69.6
Hund10653 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-09 65.5 39 82.1
BolC9t56807H Brassica oleracea HOM05D001200 ORTHO05D002731 1.4e-08 64.3 33 84.8
Oeu012765.1 Olea europaea HOM05D001200 ORTHO05D002731 1.4e-08 64.3 97 43.3
DCAR_025284 Daucus carota HOM05D001200 ORTHO05D002731 4.2e-08 62.8 42 76.2
BolSC49t61141H Brassica oleracea HOM05D001200 ORTHO05D002731 7.1e-08 62.0 70 57.1
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 7.1e-08 62.0 162 29.0
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 9.3e-08 61.6 202 26.7
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 3.5e-07 59.7 40 75.0
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 3.5e-07 59.7 89 40.4
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 3.0e-06 56.6 155 27.1
Oeu023788.1 Olea europaea HOM05D001200 ORTHO05D292390 3.0e-06 56.6 126 33.3
C03p53220 Brassica napus HOM05D000388 ORTHO05D000473 3.9e-06 56.2 29 93.1


User provided reference genes

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