Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g021210.2 Solanum lycopersicum HOM05D005034 ORTHO05D006234 2.5e-96 355.5 187 100.0
Solyc00g500085.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 1.2e-71 273.5 176 84.1
CAN.G1045.13 Capsicum annuum HOM05D005034 ORTHO05D006234 7.9e-71 270.8 185 79.5
CAN.G134.8 Capsicum annuum HOM05D005034 ORTHO05D006234 7.9e-71 270.8 185 79.5
CAN.G1526.4 Capsicum annuum HOM05D005034 ORTHO05D006234 7.9e-71 270.8 185 79.5
CAN.G278.5 Capsicum annuum HOM05D005034 ORTHO05D006234 7.9e-71 270.8 185 79.5
CAN.G413.9 Capsicum annuum HOM05D005034 ORTHO05D006234 1.1e-69 266.9 185 78.4
Peaxi162Scf01164g00036 Petunia axillaris HOM05D005034 ORTHO05D006234 2.5e-64 249.2 197 70.6
SalBow1G5942 Salvia bowleyana HOM05D005034 ORTHO05D006234 9.4e-56 220.7 176 68.2
Lj2P1238T83 Lonicera japonica HOM05D005034 ORTHO05D006234 1.0e-54 217.2 178 68.5
CSS0025903 Camellia sinensis var. sinensis HOM05D005034 ORTHO05D006234 1.4e-54 216.9 180 67.8
Gohir.1Z049831 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.2e-53 213.8 182 65.9
Gohir.A02G134200 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.2e-53 213.8 182 65.9
DCAR_032535 Daucus carota HOM05D005034 ORTHO05D006234 2.6e-53 212.6 176 66.5
Nn064s42213 Nelumbo nucifera HOM05D005034 ORTHO05D006234 3.4e-53 212.2 176 64.8
Nn212s45210 Nelumbo nucifera HOM05D005034 ORTHO05D006234 3.4e-53 212.2 176 64.8
PGR111G0056 Punica granatum HOM05D005034 ORTHO05D006234 3.4e-53 212.2 178 64.6
Gohir.A10G117233 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.3e-52 210.3 182 64.3
Potri.001G342966 Populus trichocarpa HOM05D005034 ORTHO05D006234 1.3e-52 210.3 176 61.9
PSO548G0041 Papaver somniferum HOM05D005034 ORTHO05D006234 3.7e-52 208.8 176 64.2
Lj9P89T19 Lonicera japonica HOM05D005034 ORTHO05D006234 4.1e-51 205.3 178 67.4
RcHm_v2.0_CPg0502821 Rosa chinensis HOM05D005034 ORTHO05D006234 4.1e-51 205.3 145 76.6
HanXRQChr02g0059701 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-49 199.9 180 63.9
HanXRQChr05g0152421 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-49 199.9 180 63.9
HanXRQChr06g0182991 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-49 199.9 180 63.9
HanXRQChr11g0323731 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-49 199.9 180 63.9
HanXRQChr13g0413491 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-49 199.9 180 63.9
HanXRQCPg0580361 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-49 199.9 180 63.9
LjContig00318g0021446 Lotus japonicus HOM05D005034 ORTHO05D006234 2.2e-49 199.5 185 60.5
LjContig00319g0026028 Lotus japonicus HOM05D005034 ORTHO05D006234 2.2e-49 199.5 185 60.5
HanXRQChr00c0690g0576751 Helianthus annuus HOM05D005034 ORTHO05D006234 6.5e-49 198.0 166 65.7
Medtr4g006130 Medicago truncatula HOM05D005034 ORTHO05D006234 1.9e-48 196.4 189 58.7
Lalb_Chr07g0191731 Lupinus albus HOM05D005034 ORTHO05D006234 6.1e-47 191.4 167 62.9
Sed0013321 Sechium edule HOM05D005034 ORTHO05D006234 1.0e-46 190.7 176 61.4
Sed0020615 Sechium edule HOM05D005034 ORTHO05D006234 5.2e-46 188.3 183 61.2
ATCG01040 Arabidopsis thaliana HOM05D005034 ORTHO05D006234 6.8e-46 188.0 180 58.9
arahy.Tifrunner.gnm1.ann1.ZFUC3L Arachis hypogaea HOM05D005034 ORTHO05D006234 8.8e-46 187.6 176 58.5
BraSC103t45426Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-45 186.4 186 57.0
BraSC138t45537Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-45 186.4 186 57.0
BraSC179t45777Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-45 186.4 186 57.0
BraSC25t45907Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-45 186.4 186 57.0
BraSC59t46548Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-45 186.4 186 57.0
BolSC29t60503H Brassica oleracea HOM05D005034 ORTHO05D006234 3.4e-45 185.7 186 57.0
BolSC35t60695H Brassica oleracea HOM05D005034 ORTHO05D006234 3.4e-45 185.7 186 57.0
BolSC35t60701H Brassica oleracea HOM05D005034 ORTHO05D006234 3.4e-45 185.7 186 57.0
BolSC46t60961H Brassica oleracea HOM05D005034 ORTHO05D006234 3.4e-45 185.7 186 57.0
BolSC47t61067H Brassica oleracea HOM05D005034 ORTHO05D006234 3.4e-45 185.7 186 57.0
C07p33420 Brassica napus HOM05D005034 ORTHO05D006234 4.4e-45 185.3 186 57.0
C09p40380 Brassica napus HOM05D005034 ORTHO05D006234 4.4e-45 185.3 186 57.0
BolC9t56928H Brassica oleracea HOM05D005034 ORTHO05D006234 1.3e-44 183.7 179 57.0
BolSC49t61140H Brassica oleracea HOM05D005034 ORTHO05D006234 2.2e-44 183.0 184 56.5
BraSC143t45663Z Brassica rapa HOM05D005034 ORTHO05D006234 2.8e-44 182.6 184 56.0
BolSC29t60543H Brassica oleracea HOM05D005034 ORTHO05D006234 3.7e-44 182.2 185 56.8
MBI10_g47591_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 4.9e-44 181.8 142 66.9
Gohir.D01G134300 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.8e-43 179.9 182 59.3
Sed0006489 Sechium edule HOM05D005034 ORTHO05D006234 4.5e-42 175.3 176 58.5
Nitab4.5_0000100g0130 Nicotiana tabacum HOM05D005034 ORTHO05D006234 3.8e-41 172.2 178 59.6
HanXRQChr08g0212001 Helianthus annuus HOM05D005034 ORTHO05D006234 6.1e-39 164.9 128 69.5
Oeu010692.1 Olea europaea HOM05D005034 ORTHO05D006234 2.6e-37 159.5 105 76.2
Migut.D01256 Erythranthe guttata HOM05D005034 ORTHO05D006234 3.4e-37 159.1 118 70.3
HanXRQChr09g0251521 Helianthus annuus HOM05D005034 ORTHO05D006234 5.7e-37 158.3 144 61.1
MBI10_g47592_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 5.7e-37 158.3 167 55.7
HanXRQChr09g0258531 Helianthus annuus HOM05D005034 ORTHO05D006234 1.3e-36 157.1 180 55.0
Gohir.D03G077700 Gossypium hirsutum HOM05D005034 ORTHO05D006234 6.4e-36 154.8 136 61.8
Hma1.2p1_0665F.1_g199050 Hydrangea macrophylla HOM05D005034 ORTHO05D006234 3.5e-34 149.1 91 83.5
GSVIVG01004975001 Vitis vinifera HOM05D005034 ORTHO05D006234 2.5e-32 142.9 96 74.0
arahy.Tifrunner.gnm1.ann1.RW0ZF5 Arachis hypogaea HOM05D005034 ORTHO05D006234 5.6e-32 141.7 138 54.3
Manes.18G138354 Manihot esculenta HOM05D005034 ORTHO05D006234 4.0e-30 135.6 94 73.4
BolC2t10593H Brassica oleracea HOM05D005034 ORTHO05D006234 1.9e-27 126.7 111 63.1
Ciclev10013963m.g Citrus clementina HOM05D005034 ORTHO05D006234 3.5e-26 122.5 93 68.8
HanXRQChr17g0557781 Helianthus annuus HOM05D005034 ORTHO05D006234 4.3e-24 115.5 194 42.3
Ciclev10010882m.g Citrus clementina HOM05D005034 ORTHO05D006234 5.6e-24 115.2 88 68.2
Ciclev10018423m.g Citrus clementina HOM05D005034 ORTHO05D006234 5.6e-24 115.2 88 68.2
Ciclev10027633m.g Citrus clementina HOM05D005034 ORTHO05D006234 5.6e-24 115.2 88 68.2
Ciclev10027652m.g Citrus clementina HOM05D005034 ORTHO05D006234 5.6e-24 115.2 88 68.2
Ciclev10030457m.g Citrus clementina HOM05D005034 ORTHO05D006234 5.6e-24 115.2 88 68.2
CAN.G8.23 Capsicum annuum HOM05D005034 ORTHO05D006234 7.3e-24 114.8 106 58.5
Hund25564 Selenicereus undatus HOM05D005034 ORTHO05D006234 1.1e-22 110.9 117 59.8
BolC6t36207H Brassica oleracea HOM05D005034 ORTHO05D006234 4.0e-22 109.0 100 59.0
Lalb_Chr05g0227101 Lupinus albus HOM05D005034 ORTHO05D006234 4.1e-19 99.0 66 77.3
Solyc02g150101.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 2.1e-18 96.7 118 53.4
Gorai.002G058800 Gossypium raimondii HOM05D005034 ORTHO05D006234 3.0e-17 92.8 81 63.0
Lalb_Chr18g0049451 Lupinus albus HOM05D005034 ORTHO05D006234 3.0e-17 92.8 87 57.5
Pp3c2_30980 Physcomitrium patens HOM05D005034 ORTHO05D006234 3.9e-17 92.4 147 42.2
Nitab4.5_0001130g0160 Nicotiana tabacum HOM05D005034 ORTHO05D006234 3.3e-16 89.4 79 63.3
Gohir.D03G074401 Gossypium hirsutum HOM05D005034 ORTHO05D006234 4.3e-16 89.0 81 61.7
Eucgr.C03526 Eucalyptus grandis HOM05D005034 ORTHO05D006234 6.2e-15 85.1 115 44.3
arahy.Tifrunner.gnm1.ann1.4P2RM7 Arachis hypogaea HOM05D005034 ORTHO05D006234 1.8e-14 83.6 86 55.8
PRCOL_00005002 Prasinoderma coloniale HOM05D005034 ORTHO05D006234 5.2e-14 82.0 94 45.7
Nitab4.5_0001446g0070 Nicotiana tabacum HOM05D005034 ORTHO05D006234 2.6e-13 79.7 85 54.1
BolSC37t60790H Brassica oleracea HOM05D005034 ORTHO05D006234 7.6e-13 78.2 93 49.5
MCO12G235 Micromonas commoda HOM05D005034 ORTHO05D006234 9.9e-13 77.8 117 35.0
Solyc00g500194.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 1.3e-12 77.4 41 95.1
Eucgr.K01772 Eucalyptus grandis HOM05D005034 ORTHO05D006234 2.7e-10 69.7 76 51.3
Lalb_Chr23g0274781 Lupinus albus HOM05D005034 ORTHO05D006234 4.6e-10 68.9 96 41.7
HanXRQChr01g0020091 Helianthus annuus HOM05D005034 ORTHO05D006234 1.0e-09 67.8 69 55.1
Medtr4g050940 Medicago truncatula HOM05D001243 ORTHO05D000843 7.3e-08 61.6 49 63.3


User provided reference genes

Program Settings