Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g021195.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 5.2e-51 204.1 106 100.0
CAN.G1045.16 Capsicum annuum HOM05D001750 ORTHO05D001825 5.7e-34 147.5 105 79.0
CAN.G134.7 Capsicum annuum HOM05D001750 ORTHO05D001825 5.7e-34 147.5 105 79.0
CAN.G413.7 Capsicum annuum HOM05D001750 ORTHO05D001825 5.7e-34 147.5 105 79.0
CAN.G1431.3 Capsicum annuum HOM05D001750 ORTHO05D001825 9.8e-34 146.7 105 78.1
Solyc01g017090.2 Solanum lycopersicum HOM05D001750 ORTHO05D001825 4.9e-33 144.4 105 77.1
Lj2P1238T72 Lonicera japonica HOM05D001750 ORTHO05D001825 1.8e-32 142.5 104 74.0
CAN.G1526.5 Capsicum annuum HOM05D001750 ORTHO05D001825 2.4e-32 142.1 105 77.1
HanXRQChr00c0289g0573101 Helianthus annuus HOM05D001750 ORTHO05D001825 4.1e-32 141.4 105 74.3
HanXRQChr02g0059681 Helianthus annuus HOM05D001750 ORTHO05D001825 4.1e-32 141.4 105 74.3
HanXRQChr05g0152401 Helianthus annuus HOM05D001750 ORTHO05D001825 4.1e-32 141.4 105 74.3
HanXRQChr06g0182971 Helianthus annuus HOM05D001750 ORTHO05D001825 4.1e-32 141.4 105 74.3
HanXRQChr09g0258551 Helianthus annuus HOM05D001750 ORTHO05D001825 4.1e-32 141.4 105 74.3
HanXRQChr11g0323711 Helianthus annuus HOM05D001750 ORTHO05D001825 4.1e-32 141.4 105 74.3
HanXRQCPg0580391 Helianthus annuus HOM05D001750 ORTHO05D001825 4.1e-32 141.4 105 74.3
HanXRQChr08g0212841 Helianthus annuus HOM05D001750 ORTHO05D001825 2.7e-31 138.7 105 73.3
DCAR_032533 Daucus carota HOM05D001750 ORTHO05D001825 4.6e-31 137.9 105 70.5
Solyc03g013620.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 1.0e-30 136.7 105 75.2
Eucgr.B00850 Eucalyptus grandis HOM05D001750 ORTHO05D001825 2.5e-29 132.1 104 67.3
PGR111G0046 Punica granatum HOM05D001750 ORTHO05D001825 2.5e-29 132.1 104 67.3
Sed0000095 Sechium edule HOM05D001750 ORTHO05D001825 7.3e-29 130.6 105 66.7
RcHm_v2.0_CPg0502851 Rosa chinensis HOM05D001750 ORTHO05D001825 9.5e-29 130.2 105 67.6
MELO3C027417.2 Cucumis melo HOM05D001750 ORTHO05D001825 1.6e-28 129.4 105 64.8
SalBow1G5472 Salvia bowleyana HOM05D001750 ORTHO05D001825 2.8e-28 128.6 105 64.8
Gohir.1Z049579 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.4e-27 126.3 106 65.1
Gohir.A02G134105 Gossypium hirsutum HOM05D001750 ORTHO05D001825 4.0e-27 124.8 105 65.7
Gohir.1Z049581 Gossypium hirsutum HOM05D001750 ORTHO05D001825 5.2e-27 124.4 105 65.7
Nn064s42216 Nelumbo nucifera HOM05D001750 ORTHO05D001825 6.8e-27 124.0 105 61.9
EL10As15g24136 Beta vulgaris HOM05D001750 ORTHO05D001825 1.2e-26 123.2 105 62.9
FvH4_c3g00021 Fragaria vesca HOM05D001750 ORTHO05D001825 1.2e-26 123.2 105 62.9
Gohir.A04G039195 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.5e-26 122.9 105 64.8
Gohir.D13G020450 Gossypium hirsutum HOM05D001750 ORTHO05D001825 2.6e-26 122.1 105 61.9
BraSC103t45424Z Brassica rapa HOM05D001750 ORTHO05D001825 9.8e-26 120.2 105 61.9
BraSC138t45539Z Brassica rapa HOM05D001750 ORTHO05D001825 9.8e-26 120.2 105 61.9
BraSC143t45665Z Brassica rapa HOM05D001750 ORTHO05D001825 9.8e-26 120.2 105 61.9
BraSC25t45905Z Brassica rapa HOM05D001750 ORTHO05D001825 9.8e-26 120.2 105 61.9
BraSC59t46546Z Brassica rapa HOM05D001750 ORTHO05D001825 9.8e-26 120.2 105 61.9
Potri.001G342933 Populus trichocarpa HOM05D001750 ORTHO05D001825 1.3e-25 119.8 105 61.9
ATCG01010 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 1.7e-25 119.4 105 61.9
Medtr4g006150 Medicago truncatula HOM05D001750 ORTHO05D001825 2.2e-25 119.0 106 63.2
Medtr4g051300 Medicago truncatula HOM05D001750 ORTHO05D001825 2.2e-25 119.0 106 63.2
Medtr7g021740 Medicago truncatula HOM05D001750 ORTHO05D001825 2.2e-25 119.0 106 63.2
AL7G50350 Arabidopsis lyrata HOM05D001750 ORTHO05D001825 2.9e-25 118.6 105 61.0
BolSC29t60501H Brassica oleracea HOM05D001750 ORTHO05D001825 2.9e-25 118.6 105 61.9
BolSC37t60789H Brassica oleracea HOM05D001750 ORTHO05D001825 2.9e-25 118.6 105 61.9
BolSC44t60818H Brassica oleracea HOM05D001750 ORTHO05D001825 2.9e-25 118.6 105 61.9
BolSC45t60914H Brassica oleracea HOM05D001750 ORTHO05D001825 2.9e-25 118.6 105 61.9
BolSC46t60963H Brassica oleracea HOM05D001750 ORTHO05D001825 2.9e-25 118.6 105 61.9
BolSC49t61138H Brassica oleracea HOM05D001750 ORTHO05D001825 2.9e-25 118.6 105 61.9
Medtr0002s0200 Medicago truncatula HOM05D001750 ORTHO05D001825 2.9e-25 118.6 105 60.0
Potri.011G084150 Populus trichocarpa HOM05D001750 ORTHO05D001825 1.1e-24 116.7 104 61.5
Gorai.013G022800 Gossypium raimondii HOM05D001750 ORTHO05D001825 3.2e-24 115.2 110 57.3
Lalb_Chr03g0039401 Lupinus albus HOM05D001750 ORTHO05D001825 9.2e-24 113.6 106 61.3
Lalb_Chr07g0191711 Lupinus albus HOM05D001750 ORTHO05D001825 9.2e-24 113.6 106 61.3
BolC6t36206H Brassica oleracea HOM05D001750 ORTHO05D001825 1.2e-23 113.2 111 58.6
PGSC0003DMG400020529 Solanum tuberosum HOM05D000729 ORTHO05D001063 2.0e-23 112.5 107 68.2
arahy.Tifrunner.gnm1.ann1.B6WU7N Arachis hypogaea HOM05D001750 ORTHO05D001825 1.0e-22 110.2 107 58.9
PSO548G0117 Papaver somniferum HOM05D001750 ORTHO05D001825 1.3e-22 109.8 105 59.0
LjContig00318g0010147 Lotus japonicus HOM05D001750 ORTHO05D001825 1.7e-22 109.4 106 59.4
LjContig00319g0009462 Lotus japonicus HOM05D001750 ORTHO05D001825 1.7e-22 109.4 106 59.4
arahy.Tifrunner.gnm1.ann1.5P7K6N Arachis hypogaea HOM05D001750 ORTHO05D001825 8.6e-22 107.1 107 57.9
HanXRQChr17g0557801 Helianthus annuus HOM05D001750 ORTHO05D001825 1.2e-20 103.2 89 67.4
Eucgr.G01321 Eucalyptus grandis HOM05D000445 ORTHO05D000314 1.4e-19 99.8 99 61.6
HanXRQChr01g0020101 Helianthus annuus HOM05D001750 ORTHO05D001825 1.4e-16 89.7 71 73.2
Nitab4.5_0007400g0030 Nicotiana tabacum HOM05D001750 ORTHO05D001825 5.1e-14 81.3 48 89.6
CAN.G8.25 Capsicum annuum HOM05D001750 ORTHO05D001825 3.6e-12 75.1 43 88.4
HanXRQChr00c0718g0577001 Helianthus annuus HOM05D001750 ORTHO05D001825 1.2e-10 70.1 97 50.5
Gorai.005G170400 Gossypium raimondii HOM05D001750 ORTHO05D001825 8.4e-09 63.9 45 64.4
Gohir.D02G151844 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.4e-08 63.2 45 64.4
Gorai.006G035300 Gossypium raimondii HOM05D001750 ORTHO05D001825 1.4e-08 63.2 107 46.7
Gohir.D02G112150 Gossypium hirsutum HOM05D001750 ORTHO05D001825 9.2e-08 60.5 59 61.0
Nitab4.5_0007979g0040 Nicotiana tabacum HOM05D000729 ORTHO05D002596 2.7e-07 58.9 42 73.8
HanXRQChr00c0328g0573591 Helianthus annuus HOM05D001750 ORTHO05D001825 3.0e-06 55.5 58 56.9
Lalb_Chr16g0388561 Lupinus albus HOM05D001750 ORTHO05D001825 3.0e-06 55.5 59 54.2
EL10As28g24255 Beta vulgaris HOM05D001750 ORTHO05D001825 6.6e-06 54.3 81 43.2


User provided reference genes

Program Settings