Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g021010.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.4e-93 345.5 174 100.0
Solyc06g082797.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.6e-65 251.9 134 93.3
Sopen01g025080 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-64 250.0 134 94.0
Sopen02g037750 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-64 248.4 134 93.3
Sopen03g023270 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-64 248.4 134 93.3
Sopen07g006410 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-64 248.4 134 93.3
Sopen07g029680 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-64 248.4 134 93.3
Sopen07g031580 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-64 248.4 134 93.3
Sopen08g004430 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-64 248.4 134 93.3
Sopen10g024730 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-64 248.4 134 93.3
Sopen12g022570 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-64 248.4 134 93.3
Solyc05g015654.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.1e-61 238.8 134 90.3
Sopen09g024970 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-60 235.3 134 89.6
Sopen10g015910 Solanum pennellii HOM05D000002 ORTHO05D000001 7.4e-55 217.6 134 82.1
Solyc09g061900.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.0e-48 195.7 116 87.1
Sopen08g012970 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-31 139.4 77 87.0
Sopen02g014900 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-20 103.2 94 63.8
Nitab4.5_0000184g0040 Nicotiana tabacum HOM05D000002 ORTHO05D000001 5.2e-16 88.6 70 64.3
Psat4g210200 Pisum sativum HOM05D018610 ORTHO05D000001 2.6e-15 86.3 116 41.4
Ah.11g039570 Amaranthus hybridus HOM05D000002 ORTHO05D000001 7.5e-15 84.7 104 35.6
Solyc05g050070.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.7e-14 83.6 122 32.0
arahy.Tifrunner.gnm1.ann1.8J635S Arachis hypogaea HOM05D000002 ORTHO05D000001 3.7e-14 82.4 113 36.3
Atru.chr2.2995 Acer truncatum HOM05D000002 ORTHO05D000001 3.2e-13 79.3 100 43.0
Psat7g120640 Pisum sativum HOM05D018610 ORTHO05D000001 4.1e-13 79.0 115 40.0
SEGI_13448 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.7e-11 73.6 148 35.1
TAR175G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 6.6e-11 71.6 111 34.2
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.3e-10 69.3 96 32.3
MD02G1303700 Malus domestica HOM05D000002 ORTHO05D000001 3.3e-10 69.3 119 31.1
Nitab4.5_0003288g0020 Nicotiana tabacum HOM05D000002 ORTHO05D000001 3.3e-10 69.3 124 33.1
MD05G1333300 Malus domestica HOM05D000002 ORTHO05D000001 1.2e-09 67.4 123 31.7
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 2.1e-09 66.6 124 32.3
Nitab4.5_0003591g0050 Nicotiana tabacum HOM05D000002 ORTHO05D000001 2.1e-09 66.6 121 32.2
Sabra10G0062000 Salix brachista HOM05D000002 ORTHO05D000001 3.6e-09 65.9 97 32.0
Atru.chr4.210 Acer truncatum HOM05D000002 ORTHO05D000001 4.7e-09 65.5 119 33.6
CSS0017162 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.7e-09 65.5 123 31.7
Dinv07199 Davidia involucrata HOM05D000097 ORTHO05D000041 6.2e-09 65.1 109 29.4
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 8.0e-09 64.7 116 31.9
Ciclev10030281m.g Citrus clementina HOM05D000132 ORTHO05D000058 8.0e-09 64.7 96 34.4
Peaxi162Scf01254g00010 Petunia axillaris HOM05D015337 ORTHO05D019322 8.0e-09 64.7 134 34.3
Dinv13269 Davidia involucrata HOM05D000097 ORTHO05D000041 1.4e-08 63.9 101 29.7
GSVIVG01036343001 Vitis vinifera HOM05D000067 ORTHO05D000097 1.4e-08 63.9 154 27.9
MBI09_g18618_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000001 1.8e-08 63.5 95 31.6
MD11G1146000 Malus domestica HOM05D000002 ORTHO05D000001 1.8e-08 63.5 112 32.1
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.8e-08 63.5 98 29.6
MD17G1115400 Malus domestica HOM05D000002 ORTHO05D000001 4.0e-08 62.4 115 33.9
COL.COLO4_13671 Corchorus olitorius HOM05D000002 ORTHO05D000001 5.2e-08 62.0 91 29.7
Prupe.4G199600 Prunus persica HOM05D000002 ORTHO05D000001 5.2e-08 62.0 97 33.0
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.8e-08 61.6 124 29.0
PSO754G0020 Papaver somniferum HOM05D000002 ORTHO05D000001 6.8e-08 61.6 123 26.8
Aa31LG1G6100 Aethionema arabicum HOM05D000002 ORTHO05D000001 1.2e-07 60.8 101 30.7
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 1.2e-07 60.8 90 31.1
Rhsim07G0113600 Rhododendron simsii HOM05D009466 ORTHO05D000001 1.2e-07 60.8 96 29.2
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 1.2e-07 60.8 109 31.2
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-07 60.1 124 30.6
Dinv13270 Davidia involucrata HOM05D002148 ORTHO05D013593 2.0e-07 60.1 97 29.9
MD11G1197500 Malus domestica HOM05D000002 ORTHO05D000001 2.0e-07 60.1 112 30.4
Atru.chr5.2499 Acer truncatum HOM05D019558 ORTHO05D000001 2.6e-07 59.7 100 33.0
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 2.6e-07 59.7 128 30.5
Hma1.2p1_0660F.1_g197730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.6e-07 59.7 96 32.3
MD09G1100700 Malus domestica HOM05D000002 ORTHO05D000001 2.6e-07 59.7 117 32.5
Nitab4.5_0000305g0090 Nicotiana tabacum HOM05D002833 ORTHO05D000001 2.6e-07 59.7 127 31.5
Sed0022044 Sechium edule HOM05D007933 ORTHO05D000001 2.6e-07 59.7 102 28.4
C09p34990 Brassica napus HOM05D000002 ORTHO05D000001 3.4e-07 59.3 137 29.2
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.4e-07 59.3 98 27.6
Nitab4.5_0000164g0090 Nicotiana tabacum HOM05D002833 ORTHO05D003210 4.4e-07 58.9 124 34.7
RcHm_v2.0_Chr1g0326351 Rosa chinensis HOM05D000067 ORTHO05D000097 7.5e-07 58.2 117 29.1
Sabra18G0120700 Salix brachista HOM05D000002 ORTHO05D000001 7.5e-07 58.2 114 27.2
CANSAT54G0642 Cannabis sativa HOM05D000002 ORTHO05D000001 9.8e-07 57.8 102 33.3
Ciclev10003509m.g Citrus clementina HOM05D000002 ORTHO05D000001 9.8e-07 57.8 130 30.8
COL.COLO4_28232 Corchorus olitorius HOM05D000002 ORTHO05D000001 9.8e-07 57.8 122 27.0
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.8e-07 57.8 150 27.3
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 9.8e-07 57.8 98 26.5
MD12G1254500 Malus domestica HOM05D002861 ORTHO05D003104 1.3e-06 57.4 111 28.8
Nitab4.5_0000871g0050 Nicotiana tabacum HOM05D002833 ORTHO05D003210 1.3e-06 57.4 139 28.8
Rhsim05G0076500 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.3e-06 57.4 135 28.9
Atru.chr2.3036 Acer truncatum HOM05D000002 ORTHO05D000001 1.7e-06 57.0 136 27.9
CANSAT01G0991 Cannabis sativa HOM05D000002 ORTHO05D000001 1.7e-06 57.0 98 28.6
PSO423G0202 Papaver somniferum HOM05D000973 ORTHO05D000001 1.7e-06 57.0 118 28.0
TPR.G529 Trifolium pratense HOM05D007933 ORTHO05D000001 1.7e-06 57.0 112 30.4
RcHm_v2.0_Chr3g0465981 Rosa chinensis HOM05D000002 ORTHO05D000001 2.2e-06 56.6 120 27.5
Sabra01G0007200 Salix brachista HOM05D003064 ORTHO05D000001 2.2e-06 56.6 101 28.7
Dinv09595 Davidia involucrata HOM05D000097 ORTHO05D000041 2.9e-06 56.2 128 25.8
Hma1.2p1_0200F.1_g086090 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.9e-06 56.2 112 27.7
Prupe.8G185100 Prunus persica HOM05D000002 ORTHO05D000001 2.9e-06 56.2 100 32.0
PGR031G2939 Punica granatum HOM05D027407 ORTHO05D000001 2.9e-06 56.2 139 28.8
Sabra01G0140600 Salix brachista HOM05D000002 ORTHO05D000001 2.9e-06 56.2 91 29.7
TPR.G36567 Trifolium pratense HOM05D000002 ORTHO05D000001 2.9e-06 56.2 112 32.1
Aa31LG3G5060 Aethionema arabicum HOM05D000002 ORTHO05D000001 3.7e-06 55.8 99 29.3
CANSAT11G0488 Cannabis sativa HOM05D000003 ORTHO05D000126 3.7e-06 55.8 116 30.2
RcHm_v2.0_Chr2g0129181 Rosa chinensis HOM05D000002 ORTHO05D000001 3.7e-06 55.8 130 26.2
Atru.chr3.1003 Acer truncatum HOM05D000002 ORTHO05D000001 4.9e-06 55.5 125 32.0
CANSAT01G1314 Cannabis sativa HOM05D000002 ORTHO05D000001 4.9e-06 55.5 93 29.0
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-06 55.5 115 33.0
TPR.G36530 Trifolium pratense HOM05D007933 ORTHO05D000001 4.9e-06 55.5 117 29.1
Lj6A385G50 Lonicera japonica HOM05D000097 ORTHO05D000041 6.4e-06 55.1 90 27.8
Oeu040352.1 Olea europaea HOM05D001270 ORTHO05D001099 6.4e-06 55.1 134 30.6
arahy.Tifrunner.gnm1.ann1.L2V2PJ Arachis hypogaea HOM05D000002 ORTHO05D000001 8.3e-06 54.7 99 34.3
Dinv23993 Davidia involucrata HOM05D000097 ORTHO05D000041 8.3e-06 54.7 96 28.1
Nitab4.5_0007395g0030 Nicotiana tabacum HOM05D002833 ORTHO05D000001 8.3e-06 54.7 121 32.2
Sabra15G0028100 Salix brachista HOM05D000002 ORTHO05D000001 8.3e-06 54.7 92 27.2
Solyc10g038180.3 Solanum lycopersicum HOM05D000002 ORTHO05D000001 8.3e-06 54.7 66 37.9
TPR.G12295 Trifolium pratense HOM05D000002 ORTHO05D000001 8.3e-06 54.7 92 30.4
TPR.G32053 Trifolium pratense HOM05D000002 ORTHO05D000001 8.3e-06 54.7 92 31.5


User provided reference genes

Program Settings