Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g020600.1 Solanum lycopersicum HOM05D000155 ORTHO05D000022 2.5e-109 398.7 185 100.0
PGSC0003DMG400037811 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.6e-29 132.9 106 58.5
Peaxi162Scf00362g00102 Petunia axillaris HOM05D009863 ORTHO05D000022 2.9e-17 92.8 106 47.2
Peaxi162Scf00776g00232 Petunia axillaris HOM05D000155 ORTHO05D000022 5.0e-17 92.0 106 47.2
Nitab4.5_0002324g0030 Nicotiana tabacum HOM05D014153 ORTHO05D016355 2.1e-15 86.7 104 40.4
PGSC0003DMG400020870 Solanum tuberosum HOM05D000155 ORTHO05D000022 4.0e-14 82.4 109 38.5
Nitab4.5_0000374g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.0e-13 80.1 106 38.7
PGSC0003DMG400031354 Solanum tuberosum HOM05D000155 ORTHO05D000022 9.8e-13 77.8 109 39.4
Peaxi162Scf00041g00183 Petunia axillaris HOM05D000155 ORTHO05D000022 1.3e-12 77.4 112 38.4
Peaxi162Scf00229g00123 Petunia axillaris HOM05D000155 ORTHO05D000022 1.3e-12 77.4 112 38.4
Sopen04g008670 Solanum pennellii HOM05D000155 ORTHO05D000022 1.3e-12 77.4 155 32.3
Peaxi162Scf00223g00111 Petunia axillaris HOM05D000155 ORTHO05D000022 1.7e-12 77.0 104 35.6
Nitab4.5_0002372g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.7e-12 75.9 110 35.5
Nitab4.5_0006469g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.8e-12 75.5 107 33.6
Nitab4.5_0008416g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.8e-12 75.5 112 34.8
Peaxi162Scf00983g00034 Petunia axillaris HOM05D000155 ORTHO05D000022 4.8e-12 75.5 106 35.8
Nitab4.5_0000190g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.3e-12 74.7 110 38.2
Nitab4.5_0000455g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.4e-11 73.2 107 32.7
Nitab4.5_0001440g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.0e-11 71.6 108 31.5
Nitab4.5_0013636g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-10 70.9 112 36.6
Peaxi162Scf00138g01512 Petunia axillaris HOM05D000155 ORTHO05D000022 1.7e-09 67.0 129 29.5
Nitab4.5_0002314g0170 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.3e-09 66.6 110 30.9
Nitab4.5_0004235g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.9e-09 66.2 115 33.0
PGSC0003DMG400023541 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.9e-09 66.2 132 32.6
Peaxi162Scf01052g00322 Petunia axillaris HOM05D003623 ORTHO05D035648 3.8e-09 65.9 103 33.0
Nitab4.5_0000008g0280 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.6e-09 64.7 90 36.7
PGSC0003DMG400024870 Solanum tuberosum HOM05D000155 ORTHO05D000022 8.6e-09 64.7 94 39.4
Nitab4.5_0000335g0250 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.5e-08 63.9 110 30.0
Nitab4.5_0006628g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.5e-08 63.9 104 33.7
Nitab4.5_0006265g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.2e-08 62.8 123 35.0
Peaxi162Scf00700g00035 Petunia axillaris HOM05D000155 ORTHO05D000022 3.2e-08 62.8 129 27.9
Nitab4.5_0004776g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.2e-08 62.4 109 30.3
PGSC0003DMG400015929 Solanum tuberosum HOM05D000155 ORTHO05D000022 5.5e-08 62.0 96 31.2
Nitab4.5_0000637g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000022 9.5e-08 61.2 120 30.0
Nitab4.5_0004719g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.5e-08 61.2 92 33.7
Peaxi162Scf00423g00097 Petunia axillaris HOM05D000155 ORTHO05D000022 1.2e-07 60.8 101 29.7
Nitab4.5_0001443g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.6e-07 60.5 111 33.3
Nitab4.5_0003295g0210 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.6e-07 60.5 77 44.2
Peaxi162Scf00537g00047 Petunia axillaris HOM05D000155 ORTHO05D000022 1.6e-07 60.5 91 31.9
PGSC0003DMG400037922 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.8e-07 59.7 105 36.2
Nitab4.5_0000249g0120 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.7e-07 58.9 115 35.7
Nitab4.5_0000477g0070 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.7e-07 58.9 87 41.4
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 6.1e-07 58.5 98 33.7
PGSC0003DMG400000971 Solanum tuberosum HOM05D000155 ORTHO05D000022 6.1e-07 58.5 86 38.4
SEGI_39188 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 8.0e-07 58.2 110 32.7
Nitab4.5_0000548g0080 Nicotiana tabacum HOM05D031068 ORTHO05D000022 1.0e-06 57.8 109 28.4
Nitab4.5_0000565g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.0e-06 57.8 80 35.0
Nitab4.5_0000659g0150 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.0e-06 57.8 81 34.6
Peaxi162Scf01249g00004 Petunia axillaris HOM05D000155 ORTHO05D000022 1.0e-06 57.8 106 30.2
Atru.chr3.2572 Acer truncatum HOM05D000155 ORTHO05D000022 1.8e-06 57.0 87 33.3
Nitab4.5_0000692g0240 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.8e-06 57.0 115 33.9
Peaxi162Scf00700g00339 Petunia axillaris HOM05D000273 ORTHO05D000022 2.3e-06 56.6 110 30.9
SHI28663 Sapria himalayana HOM05D000003 ORTHO05D000004 2.3e-06 56.6 104 36.5
Peaxi162Scf00160g01638 Petunia axillaris HOM05D000155 ORTHO05D000022 3.0e-06 56.2 100 29.0
Nitab4.5_0001242g0150 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.0e-06 55.8 109 30.3
Nitab4.5_0005310g0060 Nicotiana tabacum HOM05D029654 ORTHO05D000022 4.0e-06 55.8 87 29.9
MBI14_g11704_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.2e-06 55.5 92 32.6
Sopen10g022660 Solanum pennellii HOM05D000155 ORTHO05D000022 5.2e-06 55.5 120 33.3
MBI07_g35234_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.8e-06 55.1 93 32.3
Nitab4.5_0000551g0190 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.8e-06 55.1 76 39.5
Nitab4.5_0000879g0120 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.8e-06 55.1 74 39.2


User provided reference genes

Program Settings