Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g020180.3 Solanum lycopersicum HOM05D005539 ORTHO05D006644 1.5e-83 312.8 153 100.0
Sopen11g010350 Solanum pennellii HOM05D005539 ORTHO05D006644 3.9e-76 288.1 144 97.9
Solyc11g008110.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 1.7e-74 282.7 145 94.5
CAN.G1694.1 Capsicum annuum HOM05D005539 ORTHO05D006644 2.0e-72 275.8 144 93.1
Peaxi162Scf00825g00123 Petunia axillaris HOM05D005539 ORTHO05D006644 2.6e-72 275.4 144 91.0
Nitab4.5_0001171g0020 Nicotiana tabacum HOM05D005539 ORTHO05D006644 3.4e-72 275.0 146 89.0
Nitab4.5_0003886g0070 Nicotiana tabacum HOM05D005539 ORTHO05D006644 1.3e-71 273.1 146 89.0
Dinv17987 Davidia involucrata HOM05D005539 ORTHO05D006644 9.4e-62 240.4 144 79.9
Actinidia29697 Actinidia chinensis HOM05D005539 ORTHO05D006644 3.6e-61 238.4 144 77.1
GSVIVG01032835001 Vitis vinifera HOM05D005539 ORTHO05D006644 1.0e-60 236.9 144 76.4
Dinv17988 Davidia involucrata HOM05D005539 ORTHO05D006644 1.8e-60 236.1 144 78.5
QL08p063092 Quercus lobata HOM05D005539 ORTHO05D006644 1.1e-59 233.4 145 76.6
COL.COLO4_25704 Corchorus olitorius HOM05D005539 ORTHO05D006644 3.3e-59 231.9 144 75.0
Oeu064386.1 Olea europaea HOM05D005539 ORTHO05D006644 3.3e-59 231.9 144 75.7
Hma1.2p1_0703F.1_g206530 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 5.7e-59 231.1 144 74.3
Thecc.10G020000 Theobroma cacao HOM05D005539 ORTHO05D006644 7.5e-59 230.7 144 75.0
Gohir.A10G235300 Gossypium hirsutum HOM05D005539 ORTHO05D006644 9.7e-59 230.3 144 74.3
Gohir.D10G247700 Gossypium hirsutum HOM05D005539 ORTHO05D006644 9.7e-59 230.3 144 74.3
Gorai.011G286200 Gossypium raimondii HOM05D005539 ORTHO05D006644 9.7e-59 230.3 144 74.3
Duzib106G1755 Durio zibethinus HOM05D005539 ORTHO05D006644 2.2e-58 229.2 144 74.3
Nitab4.5_0000395g0010 Nicotiana tabacum HOM05D005539 ORTHO05D006644 2.8e-58 228.8 149 77.2
ECA238G2434 Erigeron canadensis HOM05D005539 ORTHO05D006644 3.7e-58 228.4 144 75.0
Haze_17219 Corylus avellana HOM05D005539 ORTHO05D006644 1.4e-57 226.5 144 72.2
Prupe.2G249200 Prunus persica HOM05D005539 ORTHO05D006644 1.4e-57 226.5 144 73.6
Manes.10G013600 Manihot esculenta HOM05D005539 ORTHO05D006644 1.8e-57 226.1 144 72.9
Lj8A68G37 Lonicera japonica HOM05D005539 ORTHO05D006644 2.4e-57 225.7 144 72.9
Actinidia33928 Actinidia chinensis HOM05D005539 ORTHO05D006644 3.1e-57 225.3 144 72.9
THA.LOC104826852 Tarenaya hassleriana HOM05D005539 ORTHO05D006644 3.1e-57 225.3 144 71.5
MD01G1152200 Malus domestica HOM05D005539 ORTHO05D006644 5.3e-57 224.6 144 71.5
CiPaw.01G297900 Carya illinoinensis HOM05D005539 ORTHO05D006644 7.0e-57 224.2 144 71.5
Lsat_1_v5_gn_2_122921 Lactuca sativa HOM05D005539 ORTHO05D006644 7.0e-57 224.2 144 73.6
Migut.F01380 Erythranthe guttata HOM05D005539 ORTHO05D006644 9.1e-57 223.8 144 74.3
Rhsim09G0176800 Rhododendron simsii HOM05D005539 ORTHO05D006644 2.7e-56 222.2 144 74.3
Potri.010G189700 Populus trichocarpa HOM05D005539 ORTHO05D006644 3.5e-56 221.9 144 75.0
Atru.chr12.24 Acer truncatum HOM05D005539 ORTHO05D006644 1.0e-55 220.3 144 71.5
RcHm_v2.0_Chr1g0370081 Rosa chinensis HOM05D005539 ORTHO05D006644 1.0e-55 220.3 144 71.5
Sabra10G0146300 Salix brachista HOM05D005539 ORTHO05D006644 1.0e-55 220.3 144 74.3
CANSAT56G2522 Cannabis sativa HOM05D005539 ORTHO05D006644 2.9e-55 218.8 144 71.5
vmacro10050 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 2.9e-55 218.8 144 72.2
Ciclev10030725m.g Citrus clementina HOM05D005539 ORTHO05D006644 3.8e-55 218.4 144 69.4
Cpa.g.sc19.181 Carica papaya HOM05D005539 ORTHO05D006644 6.5e-55 217.6 144 69.4
Potri.008G067600 Populus trichocarpa HOM05D005539 ORTHO05D006644 1.1e-54 216.9 144 72.9
Cfa001325 Carpinus fangiana HOM05D005539 ORTHO05D006644 1.5e-54 216.5 136 72.8
AUR62012239 Chenopodium quinoa HOM05D005539 ORTHO05D006644 1.5e-54 216.5 144 69.4
HanXRQChr14g0459831 Helianthus annuus HOM05D005539 ORTHO05D006644 1.5e-54 216.5 144 70.1
TAR369G0030 Trochodendron aralioides HOM05D005539 ORTHO05D006644 1.5e-54 216.5 144 70.1
vmacro10051 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 1.5e-54 216.5 142 72.5
DCAR_011807 Daucus carota HOM05D005539 ORTHO05D006644 3.2e-54 215.3 144 70.1
AT5G05680 Arabidopsis thaliana HOM05D005539 ORTHO05D006644 7.2e-54 214.2 144 68.8
PGR044G2440 Punica granatum HOM05D005539 ORTHO05D006644 9.4e-54 213.8 144 68.8
CARHR207600 Cardamine hirsuta HOM05D005539 ORTHO05D006644 2.7e-53 212.2 144 67.4
FAN10G0075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.7e-53 212.2 144 69.4
FvH4_7g24380 Fragaria vesca HOM05D005539 ORTHO05D006644 4.7e-53 211.5 144 69.4
FAN01G2659 Fragaria x ananassa HOM05D005539 ORTHO05D006644 4.7e-53 211.5 144 69.4
FAN03G1336 Fragaria x ananassa HOM05D005539 ORTHO05D006644 4.7e-53 211.5 144 69.4
FAN06G4384 Fragaria x ananassa HOM05D005539 ORTHO05D006644 4.7e-53 211.5 144 69.4
Sp6g37210 Schrenkiella parvula HOM05D005539 ORTHO05D006644 4.7e-53 211.5 144 66.7
SGA_v2.0_scaffold76G25107 Striga asiatica HOM05D005539 ORTHO05D006644 4.7e-53 211.5 144 68.1
MSTRG.8325 Avicennia marina HOM05D005539 ORTHO05D006644 1.4e-52 209.9 148 67.6
AUR62022871 Chenopodium quinoa HOM05D005539 ORTHO05D006644 1.4e-52 209.9 144 68.8
C09p71160 Brassica napus HOM05D005539 ORTHO05D006644 1.8e-52 209.5 144 66.0
Eucgr.J00217 Eucalyptus grandis HOM05D005539 ORTHO05D006644 1.8e-52 209.5 144 65.3
Nn2g13702 Nelumbo nucifera HOM05D005539 ORTHO05D006644 1.8e-52 209.5 144 66.7
Thhalv10012715m.g Eutrema salsugineum HOM05D005539 ORTHO05D006644 2.3e-52 209.1 144 66.0
AL6G15570 Arabidopsis lyrata HOM05D005539 ORTHO05D006644 3.0e-52 208.8 144 66.7
EL10Ac2g04818 Beta vulgaris HOM05D005539 ORTHO05D006644 3.0e-52 208.8 144 68.1
BcaC06g32275 Brassica carinata HOM05D005539 ORTHO05D006644 4.0e-52 208.4 146 66.4
BcaC06g32273 Brassica carinata HOM05D005539 ORTHO05D006644 5.2e-52 208.0 144 66.0
FAN06G5029 Fragaria x ananassa HOM05D005539 ORTHO05D006644 5.2e-52 208.0 142 69.0
Carub.0006s0457 Capsella rubella HOM05D005539 ORTHO05D006644 8.8e-52 207.2 144 66.0
Hund15944 Selenicereus undatus HOM05D005539 ORTHO05D006644 8.8e-52 207.2 143 65.7
A10p30680 Brassica napus HOM05D005539 ORTHO05D006644 1.2e-51 206.8 145 66.2
Sc14g0005370 Simmondsia chinensis HOM05D005539 ORTHO05D006644 1.5e-51 206.5 144 66.0
arahy.Tifrunner.gnm1.ann1.W7ADHZ Arachis hypogaea HOM05D005539 ORTHO05D006644 2.0e-51 206.1 144 67.4
Lalb_Chr15g0084151 Lupinus albus HOM05D005539 ORTHO05D006644 2.0e-51 206.1 144 66.7
FAN06G2075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.6e-51 205.7 141 68.8
FAN10G4325 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.6e-51 205.7 141 68.8
Aqoxy4G02586 Aquilegia oxysepala HOM05D005539 ORTHO05D006644 3.4e-51 205.3 144 63.9
PSO384G3240 Papaver somniferum HOM05D005539 ORTHO05D006644 5.7e-51 204.5 144 65.3
Aa31LG11G6690 Aethionema arabicum HOM05D005539 ORTHO05D006644 1.3e-50 203.4 144 64.6
arahy.Tifrunner.gnm1.ann1.4ME2IF Arachis hypogaea HOM05D005539 ORTHO05D006644 1.3e-50 203.4 144 66.7
PSO339G2908 Papaver somniferum HOM05D005539 ORTHO05D006644 2.2e-50 202.6 144 65.3
Phvul.001G242300 Phaseolus vulgaris HOM05D005539 ORTHO05D006644 2.2e-50 202.6 144 63.9
Sc14g0005420 Simmondsia chinensis HOM05D005539 ORTHO05D006644 2.2e-50 202.6 144 65.3
BcaB05g21701 Brassica carinata HOM05D005539 ORTHO05D006644 6.3e-50 201.1 144 65.3
Lj6g0015972 Lotus japonicus HOM05D005539 ORTHO05D006644 1.4e-49 199.9 144 64.6
VMungo1383G3500 Vigna mungo HOM05D005539 ORTHO05D006644 2.4e-49 199.1 144 63.2
Sed0009998 Sechium edule HOM05D005539 ORTHO05D006644 7.0e-49 197.6 144 66.7
CsaV3_5G010080 Cucumis sativus L. HOM05D005539 ORTHO05D006644 1.2e-48 196.8 144 68.1
Glyma.11G229000 Glycine max HOM05D005539 ORTHO05D006644 1.6e-48 196.4 144 63.2
BolC9t59878H Brassica oleracea HOM05D005539 ORTHO05D006644 2.7e-48 195.7 170 55.9
MELO3C025184.2 Cucumis melo HOM05D005539 ORTHO05D006644 7.7e-48 194.1 144 67.4
Medtr3g070390 Medicago truncatula HOM05D005539 ORTHO05D006644 1.7e-47 193.0 144 60.4
ATR0193G007 Amborella trichopoda HOM05D005539 ORTHO05D006644 2.2e-47 192.6 144 60.4
Cc02_g06620 Coffea canephora HOM05D005539 ORTHO05D006644 2.2e-47 192.6 144 63.9
Ca_15119_v3 Cicer arietinum L. HOM05D005539 ORTHO05D006644 3.8e-47 191.8 144 62.5
Psat5g128120 Pisum sativum HOM05D005539 ORTHO05D006644 8.5e-47 190.7 144 61.1
TPR.G2533 Trifolium pratense HOM05D005539 ORTHO05D006644 5.5e-46 188.0 142 61.3
Hma1.2p1_0703F.1_g206540 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 2.3e-44 182.6 159 57.9
Os04g0608400 Oryza sativa ssp. japonica HOM05D005539 ORTHO05D006644 3.0e-44 182.2 145 60.0
Zm00001eb430560 Zea mays HOM05D005539 ORTHO05D006644 6.3e-42 174.5 144 57.6
HPP92_019887 Vanilla planifolia HOM05D005539 ORTHO05D006644 1.1e-38 163.7 144 53.5
CSS0043358 Camellia sinensis var. sinensis HOM05D005539 ORTHO05D006644 1.5e-38 163.3 144 58.3
ClCG07G004120 Citrullus lanatus HOM05D005539 ORTHO05D006644 1.9e-38 162.9 98 76.5
SHI03446 Sapria himalayana HOM05D005539 ORTHO05D006644 6.1e-37 157.9 141 53.9
SEGI_33727 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 4.6e-32 141.7 153 52.3
Pp3c6_24520 Physcomitrium patens HOM05D005539 ORTHO05D006644 1.6e-24 116.7 154 44.8
Mapoly0043s0044 Marchantia polymorpha HOM05D005539 ORTHO05D006644 1.0e-23 114.0 149 41.6
SEGI_27471 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 8.6e-23 110.9 115 53.0
AagrBONN_evm.TU.Sc2ySwM_362.2924 Anthoceros agrestis HOM05D005539 ORTHO05D006644 3.1e-20 102.4 153 41.8
CBR_g22013 Chara braunii HOM05D005539 ORTHO05D006644 4.0e-20 102.1 157 41.4
Glyma.18G028167 Glycine max HOM05D005539 ORTHO05D006644 3.7e-18 95.5 62 69.4
Ah.04g164520 Amaranthus hybridus HOM05D005539 ORTHO05D006644 2.4e-17 92.8 144 41.0
vmacro22159 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 2.3e-15 86.3 72 59.7
CDE04G3215 Ceratophyllum demersum HOM05D005539 ORTHO05D006644 1.1e-12 77.4 51 68.6
unitig_0.g238 Utricularia gibba HOM05D005539 ORTHO05D006644 3.1e-12 75.9 96 41.7
BraA10t45109Z Brassica rapa HOM05D005539 ORTHO05D006644 8.9e-12 74.3 66 53.0
CDE04G1676 Ceratophyllum demersum HOM05D005539 ORTHO05D006644 9.9e-11 70.9 73 43.8
C03p17190 Brassica napus HOM05D001640 ORTHO05D001612 4.9e-10 68.6 73 46.6
HPP92_019878 Vanilla planifolia HOM05D005539 ORTHO05D006644 2.4e-09 66.2 64 48.4
BolC3t14133H Brassica oleracea HOM05D001640 ORTHO05D001612 1.0e-07 60.8 91 37.4


User provided reference genes

Program Settings