Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.8e-112 409.5 233 100.0
Solyc11g018470.3 Solanum lycopersicum HOM05D005772 ORTHO05D006468 4.9e-70 268.5 175 85.1
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 6.9e-64 248.1 237 67.5
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 1.3e-59 233.8 222 61.7
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 2.5e-42 176.4 234 44.0
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 4.5e-39 165.6 247 44.1
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 1.1e-37 161.0 243 46.9
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 3.2e-37 159.5 234 41.9
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 2.7e-36 156.4 234 41.5
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 1.3e-35 154.1 246 39.0
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 5.1e-35 152.1 220 50.0
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 7.4e-34 148.3 236 39.8
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 1.7e-33 147.1 238 39.9
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 4.8e-33 145.6 243 39.1
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 2.9e-30 136.3 246 39.0
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 6.5e-30 135.2 230 36.5
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 8.5e-30 134.8 237 38.4
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 1.9e-29 133.7 244 34.8
SalBow5G0344 Salvia bowleyana HOM05D005772 ORTHO05D006468 3.2e-29 132.9 225 44.9
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 4.2e-29 132.5 232 35.8
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 7.2e-29 131.7 225 36.9
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 9.4e-29 131.3 235 37.9
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 9.4e-29 131.3 232 35.3
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 2.1e-28 130.2 230 35.7
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 2.1e-28 130.2 238 41.2
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 1.4e-27 127.5 234 44.4
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 1.8e-27 127.1 218 41.3
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 3.0e-27 126.3 230 35.2
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 3.9e-27 125.9 250 36.4
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 6.7e-27 125.2 241 38.2
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 2.0e-26 123.6 241 35.7
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 3.3e-26 122.9 194 37.6
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 4.4e-26 122.5 247 34.0
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 4.4e-26 122.5 241 34.4
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 5.7e-26 122.1 201 38.8
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 5.7e-26 122.1 226 38.9
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 7.4e-26 121.7 235 35.7
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 9.7e-26 121.3 232 36.2
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 3.7e-25 119.4 180 42.2
SalBow8G0153 Salvia bowleyana HOM05D005772 ORTHO05D006468 4.8e-25 119.0 225 44.0
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 6.3e-25 118.6 236 37.3
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 1.1e-24 117.9 252 32.5
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 3.1e-24 116.3 249 36.9
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 3.1e-24 116.3 213 36.2
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 5.3e-24 115.5 248 35.1
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 1.5e-23 114.0 252 36.1
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 2.6e-23 113.2 209 36.4
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 2.6e-23 113.2 228 34.6
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 3.4e-23 112.8 243 34.6
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 5.9e-23 112.1 234 36.3
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 7.7e-23 111.7 208 37.0
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 3.8e-22 109.4 222 33.8
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 6.5e-22 108.6 210 36.2
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 6.5e-22 108.6 222 34.2
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 2.5e-21 106.7 219 32.4
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 9.4e-21 104.8 231 35.1
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.6e-20 104.0 220 31.8
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 1.6e-20 104.0 204 36.3
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 2.7e-20 103.2 213 38.0
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 4.7e-20 102.4 223 30.9
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 6.1e-20 102.1 284 29.2
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 8.0e-20 101.7 177 36.7
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 2.3e-19 100.1 204 34.3
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 6.7e-19 98.6 210 32.9
unitig_22.g6227 Utricularia gibba HOM05D005772 ORTHO05D006468 5.7e-18 95.5 66 60.6
Nitab4.5_0003012g0080 Nicotiana tabacum HOM05D005772 ORTHO05D006468 1.8e-16 90.5 50 84.0
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 3.1e-16 89.7 219 32.9
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 5.3e-16 89.0 179 37.4
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 7.0e-16 88.6 223 33.6
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 2.6e-15 86.7 181 32.6
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 5.9e-15 85.5 208 31.7
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.7e-14 84.0 180 32.8
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.7e-14 84.0 230 31.3
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 3.8e-14 82.8 200 30.0
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 3.8e-14 82.8 215 31.6
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 5.0e-14 82.4 167 33.5
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 1.9e-13 80.5 199 33.7
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 1.9e-13 80.5 215 31.6
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 3.2e-13 79.7 230 30.9
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 4.2e-13 79.3 202 31.2
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 5.5e-13 79.0 230 30.4
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 5.5e-13 79.0 126 35.7
Peaxi162Scf00310g00057 Petunia axillaris HOM05D005772 ORTHO05D006468 7.2e-13 78.6 91 48.4
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 9.4e-13 78.2 185 31.4
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 1.2e-12 77.8 230 30.9
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 1.6e-12 77.4 207 30.4
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 6.1e-12 75.5 209 30.1
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 1.0e-11 74.7 144 30.6
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 1.0e-11 74.7 197 29.9
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 1.4e-11 74.3 147 30.6
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 1.8e-11 73.9 228 28.5
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 2.3e-11 73.6 215 27.4
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 2.3e-11 73.6 212 30.2
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 3.0e-11 73.2 161 34.2
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 5.2e-11 72.4 212 28.8
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 5.2e-11 72.4 83 43.4
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 5.2e-11 72.4 83 43.4
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 5.2e-11 72.4 83 43.4
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 6.7e-11 72.0 82 37.8
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 8.8e-11 71.6 206 31.6
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 8.8e-11 71.6 178 29.8
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 8.8e-11 71.6 134 32.8
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 1.5e-10 70.9 168 34.5
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 1.5e-10 70.9 135 33.3
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 2.0e-10 70.5 229 26.6
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 2.0e-10 70.5 233 28.8
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 2.6e-10 70.1 212 29.7
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 2.6e-10 70.1 212 29.7
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 2.6e-10 70.1 177 28.8
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 5.7e-10 68.9 231 27.3
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 7.5e-10 68.6 148 34.5
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 9.7e-10 68.2 177 36.7
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 1.3e-09 67.8 179 30.2
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 2.2e-09 67.0 121 31.4
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 2.2e-09 67.0 234 26.1
Lsat_1_v5_gn_8_150021 Lactuca sativa HOM05D041600 ORTHO05D006468 8.2e-09 65.1 170 30.0
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 2.4e-08 63.5 194 28.9
Sp5g33960 Schrenkiella parvula HOM05D005772 ORTHO05D006468 9.1e-08 61.6 213 27.7
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 2.7e-07 60.1 191 29.3
SGA_v2.0_scaffold2751G54198 Striga asiatica HOM05D005772 ORTHO05D006468 5.9e-07 58.9 131 38.2
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 6.5e-06 55.5 168 30.4


User provided reference genes

Program Settings