Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 2.8e-100 368.6 184 100.0
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 3.0e-99 365.2 184 98.4
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 7.8e-87 323.9 195 86.7
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 3.5e-47 192.2 195 56.4
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 8.4e-41 171.0 181 56.9
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 2.5e-32 142.9 200 46.5
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 7.9e-31 137.9 193 48.7
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 3.0e-30 136.0 203 44.8
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 8.7e-30 134.4 208 45.7
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 4.3e-29 132.1 212 44.3
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 5.7e-29 131.7 211 41.7
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 1.3e-28 130.6 189 42.9
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 1.3e-28 130.6 189 42.9
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 3.7e-28 129.0 208 42.3
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 8.2e-28 127.9 208 44.7
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 1.1e-27 127.5 213 43.2
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 1.4e-27 127.1 210 42.9
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 1.4e-27 127.1 201 48.8
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 1.4e-27 127.1 220 42.7
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 1.2e-26 124.0 196 42.9
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 1.5e-26 123.6 212 43.4
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 2.6e-26 122.9 227 40.5
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 3.4e-26 122.5 218 42.2
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 4.5e-26 122.1 211 43.6
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 5.9e-26 121.7 210 42.4
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.7e-25 120.2 216 38.9
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 6.5e-25 118.2 220 40.0
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 6.5e-25 118.2 212 41.5
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 6.5e-25 118.2 180 45.0
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 8.5e-25 117.9 221 38.9
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 1.1e-24 117.5 201 41.3
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 1.1e-24 117.5 201 41.3
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.4e-24 117.1 214 40.2
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 1.4e-24 117.1 214 40.2
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 2.5e-24 116.3 184 43.5
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 3.2e-24 115.9 217 39.6
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 5.5e-24 115.2 213 39.4
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 5.5e-24 115.2 199 41.2
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 7.2e-24 114.8 178 46.6
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 1.2e-23 114.0 220 38.6
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 1.2e-23 114.0 202 40.6
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.7e-23 112.8 188 42.6
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 2.7e-23 112.8 225 36.0
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 4.6e-23 112.1 227 38.3
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 6.1e-23 111.7 161 47.8
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 6.1e-23 111.7 189 43.9
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 7.9e-23 111.3 226 36.7
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 7.9e-23 111.3 199 41.2
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 1.4e-22 110.5 213 38.5
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 2.3e-22 109.8 199 40.2
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 3.0e-22 109.4 202 40.1
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.0e-22 109.4 199 40.2
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 3.9e-22 109.0 203 40.4
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 6.7e-22 108.2 147 44.2
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.0e-21 106.7 197 42.1
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 4.3e-21 105.5 187 40.1
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 5.7e-21 105.1 222 36.0
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 7.4e-21 104.8 162 47.5
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 1.3e-20 104.0 207 38.2
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 1.7e-20 103.6 179 44.1
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.7e-20 103.6 175 40.0
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 1.7e-20 103.6 196 36.2
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 2.2e-20 103.2 202 39.6
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 2.8e-20 102.8 177 44.1
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 3.7e-20 102.4 181 43.1
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 3.7e-20 102.4 174 43.1
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 4.8e-20 102.1 184 39.7
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 6.3e-20 101.7 225 40.4
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 8.2e-20 101.3 193 38.3
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.4e-19 100.5 190 37.9
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 1.8e-19 100.1 184 43.5
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 1.8e-19 100.1 208 34.6
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 2.4e-19 99.8 200 38.0
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 2.4e-19 99.8 185 38.4
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 2.4e-19 99.8 116 50.0
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 5.3e-19 98.6 222 36.0
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 9.1e-19 97.8 208 36.1
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 2.6e-18 96.3 205 37.1
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 4.5e-18 95.5 236 35.6
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 5.9e-18 95.1 243 35.4
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 1.0e-17 94.4 235 36.2
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 1.7e-17 93.6 191 37.7
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 1.7e-17 93.6 191 37.7
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 2.2e-17 93.2 168 43.5
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 2.9e-17 92.8 156 42.9
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 8.5e-17 91.3 173 37.0
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.4e-16 90.5 186 37.6
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 2.5e-16 89.7 184 40.8
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 3.2e-16 89.4 240 32.1
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 4.2e-16 89.0 275 30.2
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 4.7e-15 85.5 137 43.1
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 1.4e-14 84.0 223 33.2
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 1.4e-14 84.0 180 35.0
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 8.8e-14 81.3 192 35.9
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 8.8e-14 81.3 192 35.9
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 2.6e-13 79.7 156 35.3
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 2.2e-12 76.6 201 33.3
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 6.3e-12 75.1 270 31.1
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 6.3e-12 75.1 111 46.8
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 2.4e-11 73.2 230 31.3
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 4.1e-11 72.4 163 35.6
DCAR_031230 Daucus carota HOM05D007182 ORTHO05D008919 1.6e-10 70.5 160 33.1
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 2.6e-10 69.7 226 29.6
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 4.5e-10 68.9 145 37.2
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 8.5e-09 64.7 177 31.1
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 2.5e-08 63.2 161 30.4
HanXRQChr02g0037031 Helianthus annuus HOM05D007182 ORTHO05D008919 3.2e-08 62.8 189 32.3
Lj7P307T15 Lonicera japonica HOM05D007182 ORTHO05D008919 2.1e-07 60.1 64 50.0
MBI06_g01043_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 4.7e-07 58.9 130 36.9


User provided reference genes

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