Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 4.5e-194 681.0 328 100.0
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 4.3e-189 664.5 328 97.6
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 4.8e-180 634.4 325 92.0
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 5.0e-177 624.4 325 90.2
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 4.2e-168 594.7 310 90.6
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 1.7e-164 582.8 328 81.7
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 3.7e-164 581.6 328 81.7
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 1.8e-163 579.3 328 81.7
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 5.0e-161 571.2 328 79.9
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 1.5e-160 569.7 328 79.3
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 1.9e-160 569.3 329 80.5
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 1.2e-159 566.6 328 79.0
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 1.6e-159 566.2 328 78.4
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 1.0e-158 563.5 328 79.6
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 2.3e-158 562.4 328 77.7
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 2.3e-158 562.4 328 78.7
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 2.3e-158 562.4 328 77.7
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 4.0e-158 561.6 328 77.1
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 6.7e-158 560.8 312 86.5
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 8.8e-158 560.5 328 78.0
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 1.1e-157 560.1 318 80.2
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 1.1e-157 560.1 318 80.2
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 2.0e-157 559.3 327 77.1
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 2.0e-157 559.3 328 77.4
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 2.6e-157 558.9 328 78.4
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 3.3e-157 558.5 327 77.1
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 3.3e-157 558.5 328 76.8
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 2.2e-156 555.8 326 76.7
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 2.8e-156 555.4 328 78.0
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 4.8e-156 554.7 326 76.7
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 8.2e-156 553.9 326 77.0
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 3.1e-155 552.0 328 76.8
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 4.1e-155 551.6 327 76.5
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 2.7e-154 548.9 327 75.8
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 5.9e-154 547.7 326 76.7
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 1.3e-153 546.6 327 75.5
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 5.0e-153 544.7 328 74.7
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 6.5e-153 544.3 327 75.5
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 1.1e-152 543.5 328 75.6
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.5e-152 543.1 329 75.7
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 1.9e-152 542.7 328 75.0
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 4.2e-152 541.6 327 75.5
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 5.5e-152 541.2 327 75.5
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 9.4e-152 540.4 326 74.2
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 9.4e-152 540.4 328 75.3
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.2e-151 540.0 329 75.4
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.6e-151 539.7 328 75.9
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 2.1e-151 539.3 328 75.9
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 2.1e-151 539.3 327 74.9
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 2.7e-151 538.9 329 75.4
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 6.1e-151 537.7 328 74.1
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 3.0e-150 535.4 341 74.5
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 4.0e-150 535.0 328 75.0
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 4.0e-150 535.0 328 77.4
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 8.8e-150 533.9 330 74.8
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 1.5e-149 533.1 328 75.0
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 2.6e-149 532.3 330 74.2
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 1.7e-148 529.6 328 73.2
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 4.8e-148 528.1 330 74.2
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 6.3e-148 527.7 330 74.5
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 6.3e-148 527.7 320 75.9
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 1.4e-147 526.6 330 73.3
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 1.4e-147 526.6 308 76.6
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 3.1e-147 525.4 330 74.2
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 7.0e-147 524.2 331 72.8
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 2.0e-146 522.7 330 73.6
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 1.0e-145 520.4 346 71.1
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 1.3e-145 520.0 335 72.5
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 2.2e-145 519.2 328 72.9
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.2e-145 519.2 326 73.6
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.9e-145 518.8 326 73.6
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 8.5e-145 517.3 332 72.6
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 2.5e-144 515.8 335 71.0
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 2.5e-144 515.8 325 71.7
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 8.0e-143 510.8 328 73.2
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 3.0e-142 508.8 327 70.6
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 4.4e-141 505.0 328 69.5
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 1.3e-140 503.4 328 70.4
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 1.8e-139 499.6 320 71.6
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 3.1e-139 498.8 326 71.5
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 5.4e-139 498.0 317 72.2
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 1.2e-138 496.9 328 69.5
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 2.9e-137 492.3 328 68.6
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 8.6e-137 490.7 328 68.9
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 8.6e-137 490.7 328 71.0
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 3.0e-134 482.3 328 69.2
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 1.5e-128 463.4 328 67.4
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 5.6e-128 461.5 252 81.7
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 3.6e-127 458.8 325 64.0
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 6.2e-127 458.0 325 63.7
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 8.9e-126 454.1 254 80.7
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 8.9e-126 454.1 319 68.3
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 1.4e-123 446.8 254 79.5
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 1.9e-123 446.4 254 79.5
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 8.6e-121 437.6 328 62.5
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 1.4e-118 430.3 306 64.7
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 8.9e-118 427.6 277 71.8
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 8.9e-118 427.6 309 63.8
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 4.6e-114 415.2 328 62.5
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 5.6e-112 408.3 253 75.1
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 7.3e-112 407.9 198 100.0
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 3.6e-111 405.6 317 58.7
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 4.7e-111 405.2 309 58.6
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 4.4e-109 398.7 234 76.1
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 1.2e-103 380.6 218 81.7
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 9.3e-91 337.8 313 52.4
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 1.1e-72 277.7 166 70.5
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 1.1e-62 244.6 144 81.2
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 5.7e-56 222.2 132 79.5
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 3.7e-47 193.0 264 39.4
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 9.1e-46 188.3 313 37.7
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 4.5e-45 186.0 142 57.7
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 5.2e-41 172.6 115 67.8
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 1.3e-39 167.9 303 35.0
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 3.7e-31 139.8 111 64.9
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 4.8e-31 139.4 133 57.1
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 2.0e-29 134.0 109 52.3
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 1.7e-28 131.0 78 80.8
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 4.0e-25 119.8 69 84.1
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.0e-24 117.5 67 67.2
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 2.7e-21 107.1 82 54.9
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 9.5e-19 98.6 58 75.9
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 1.8e-17 94.4 72 59.7
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 5.6e-11 72.8 62 61.3
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 2.6e-08 63.9 36 72.2
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 5.8e-08 62.8 42 64.3


User provided reference genes

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