Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g012520.1 Solanum lycopersicum HOM05D018828 ORTHO05D004423 5.4e-63 244.2 127 100.0
Sopen11g007260 Solanum pennellii HOM05D018828 ORTHO05D004423 3.8e-48 194.9 105 94.3
CAN.G696.14 Capsicum annuum HOM05D018828 ORTHO05D004423 6.9e-42 174.1 129 80.6
Nitab4.5_0000143g0030 Nicotiana tabacum HOM05D018828 ORTHO05D004423 5.7e-20 101.3 131 51.9
PGSC0003DMG400008468 Solanum tuberosum HOM05D018828 ORTHO05D004423 1.9e-12 76.3 129 44.2
Lsat_1_v5_gn_7_13860 Lactuca sativa HOM05D004793 ORTHO05D004423 8.2e-11 70.9 148 37.8
MSTRG.7149 Avicennia marina HOM05D004793 ORTHO05D004423 1.3e-08 63.5 138 40.6
DCAR_002230 Daucus carota HOM05D004793 ORTHO05D004423 1.7e-08 63.2 140 38.6
SGA_v2.0_scaffold7G03722 Striga asiatica HOM05D026462 ORTHO05D004423 1.7e-08 63.2 127 38.6
TPR.G10593 Trifolium pratense HOM05D004793 ORTHO05D004423 2.9e-08 62.4 142 40.1
DCAR_030858 Daucus carota HOM05D004793 ORTHO05D004423 5.0e-08 61.6 135 36.3
QL05p068371 Quercus lobata HOM05D004793 ORTHO05D004423 1.1e-07 60.5 139 35.3
QL05p068872 Quercus lobata HOM05D004793 ORTHO05D004423 1.1e-07 60.5 139 35.3
Rhsim13G0143200 Rhododendron simsii HOM05D004793 ORTHO05D004423 2.5e-07 59.3 140 40.0
Medtr2g026510 Medicago truncatula HOM05D004793 ORTHO05D004423 5.5e-07 58.2 144 41.0
CSS0021588 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 7.2e-07 57.8 139 39.6
COL.COLO4_08493 Corchorus olitorius HOM05D004793 ORTHO05D004423 7.2e-07 57.8 138 39.1
Peaxi162Scf00576g00062 Petunia axillaris HOM05D018828 ORTHO05D004423 9.4e-07 57.4 135 40.0
Phvul.006G141500 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 9.4e-07 57.4 137 37.2
Atru.chr6.3360 Acer truncatum HOM05D004793 ORTHO05D004423 1.6e-06 56.6 136 37.5
Ciclev10017917m.g Citrus clementina HOM05D004793 ORTHO05D004423 1.6e-06 56.6 138 39.9
Glyma.15G116700 Glycine max HOM05D004793 ORTHO05D004423 1.6e-06 56.6 137 35.0
Lalb_Chr15g0088081 Lupinus albus HOM05D004793 ORTHO05D004423 1.6e-06 56.6 149 37.6
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 1.6e-06 56.6 125 34.4
Lj2P260T34 Lonicera japonica HOM05D004793 ORTHO05D004423 2.1e-06 56.2 149 41.6
Sabra16G0013200 Salix brachista HOM05D004793 ORTHO05D004423 2.1e-06 56.2 145 35.2
CiPaw.09G105400 Carya illinoinensis HOM05D004793 ORTHO05D004423 3.6e-06 55.5 146 34.9
Prupe.4G007200 Prunus persica HOM05D004793 ORTHO05D004423 3.6e-06 55.5 153 35.3
Cpa.g.sc2750.2 Carica papaya HOM05D004793 ORTHO05D004423 4.7e-06 55.1 136 41.9
Haze_06976 Corylus avellana HOM05D004793 ORTHO05D004423 4.7e-06 55.1 140 37.9
Psat4g002280 Pisum sativum HOM05D004793 ORTHO05D004423 4.7e-06 55.1 128 37.5
Psat2g004520 Pisum sativum HOM05D004793 ORTHO05D004423 7.9e-06 54.3 123 41.5


User provided reference genes

Program Settings