Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g012310.1 Solanum lycopersicum HOM05D007829 ORTHO05D009903 4.7e-49 197.6 102 100.0
Sopen11g007080 Solanum pennellii HOM05D007829 ORTHO05D009903 4.1e-37 157.9 89 91.0
Solyc11g012300.1 Solanum lycopersicum HOM05D007829 ORTHO05D009903 2.2e-35 152.1 89 87.6
PGSC0003DMG400013350 Solanum tuberosum HOM05D007829 ORTHO05D009903 8.6e-19 97.1 59 76.3
Rhsim02G0099400 Rhododendron simsii HOM05D007829 ORTHO05D009903 1.1e-13 80.1 83 47.0
Prupe.4G010000 Prunus persica HOM05D007829 ORTHO05D009903 7.0e-13 77.4 91 45.1
Actinidia39272 Actinidia chinensis HOM05D007829 ORTHO05D009903 1.2e-12 76.6 84 47.6
Dinv07407 Davidia involucrata HOM05D007829 ORTHO05D009903 1.2e-12 76.6 54 63.0
Migut.M01399 Erythranthe guttata HOM05D007829 ORTHO05D009903 6.0e-12 74.3 83 45.8
MD10G1332100 Malus domestica HOM05D007829 ORTHO05D009903 6.0e-12 74.3 91 44.0
Manes.08G071000 Manihot esculenta HOM05D007829 ORTHO05D009903 6.0e-12 74.3 81 46.9
Potri.016G013200 Populus trichocarpa HOM05D007829 ORTHO05D009903 6.0e-12 74.3 86 47.7
Hma1.2p1_0657F.1_g197120 Hydrangea macrophylla HOM05D007829 ORTHO05D009903 7.8e-12 73.9 87 46.0
TWI38G1785 Tripterygium wilfordii HOM05D007829 ORTHO05D009903 1.7e-11 72.8 88 48.9
TAR629G0037 Trochodendron aralioides HOM05D007829 ORTHO05D009903 2.3e-11 72.4 86 46.5
CSS0014217 Camellia sinensis var. sinensis HOM05D007829 ORTHO05D009903 3.0e-11 72.0 78 50.0
SGA_v2.0_scaffold4G01872 Striga asiatica HOM05D007829 ORTHO05D009903 3.0e-11 72.0 81 42.0
TAR627G0564 Trochodendron aralioides HOM05D007829 ORTHO05D009903 3.9e-11 71.6 88 43.2
TAR627G1193 Trochodendron aralioides HOM05D007829 ORTHO05D009903 3.9e-11 71.6 88 43.2
Oeu002768.1 Olea europaea HOM05D007829 ORTHO05D009903 5.0e-11 71.2 85 44.7
QL05p069622 Quercus lobata HOM05D007829 ORTHO05D009903 5.0e-11 71.2 92 44.6
Nn1g07397 Nelumbo nucifera HOM05D007829 ORTHO05D009903 6.6e-11 70.9 87 40.2
Gohir.A10G009200 Gossypium hirsutum HOM05D007829 ORTHO05D009903 1.1e-10 70.1 85 40.0
Aqoxy2G02687 Aquilegia oxysepala HOM05D007829 ORTHO05D009903 5.6e-10 67.8 67 46.3
Gohir.D10G008900 Gossypium hirsutum HOM05D007829 ORTHO05D009903 9.5e-10 67.0 85 38.8
Gorai.011G009700 Gossypium raimondii HOM05D007829 ORTHO05D009903 9.5e-10 67.0 85 38.8
Sabra16G0002200 Salix brachista HOM05D007829 ORTHO05D009903 1.6e-09 66.2 84 41.7
Sabra16G0015800 Salix brachista HOM05D007829 ORTHO05D009903 1.6e-09 66.2 84 41.7
COL.COLO4_31889 Corchorus olitorius HOM05D007829 ORTHO05D009903 3.6e-09 65.1 81 45.7
THA.LOC104813576 Tarenaya hassleriana HOM05D007829 ORTHO05D009903 4.7e-09 64.7 87 39.1
Nitab4.5_0015422g0020 Nicotiana tabacum HOM05D007829 ORTHO05D009903 1.4e-08 63.2 59 64.4
Sp7g20500 Schrenkiella parvula HOM05D007829 ORTHO05D009903 2.3e-08 62.4 79 39.2
CiPaw.10G078200 Carya illinoinensis HOM05D007829 ORTHO05D009903 4.0e-08 61.6 84 40.5
Cpa.g.sc75.113 Carica papaya HOM05D007829 ORTHO05D009903 5.2e-08 61.2 82 37.8
Lj6g0010113 Lotus japonicus HOM05D007829 ORTHO05D009903 5.2e-08 61.2 86 37.2
CARHR229280 Cardamine hirsuta HOM05D007829 ORTHO05D009903 6.8e-08 60.8 75 40.0
Thecc.06G233800 Theobroma cacao HOM05D007829 ORTHO05D009903 6.8e-08 60.8 81 39.5
PSO541G5076 Papaver somniferum HOM05D007829 ORTHO05D009903 8.9e-08 60.5 87 36.8
PSO675G8147 Papaver somniferum HOM05D007829 ORTHO05D009903 1.2e-07 60.1 87 36.8
Sc05g0009620 Simmondsia chinensis HOM05D007829 ORTHO05D009903 1.5e-07 59.7 89 37.1
Carub.0007s1893 Capsella rubella HOM05D007829 ORTHO05D009903 3.4e-07 58.5 76 38.2
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 3.4e-07 58.5 42 59.5
Cc00_g34400 Coffea canephora HOM05D007829 ORTHO05D009903 5.8e-07 57.8 107 34.6
AL7G31240 Arabidopsis lyrata HOM05D007829 ORTHO05D009903 7.5e-07 57.4 54 44.4
AT4G22370 Arabidopsis thaliana HOM05D007829 ORTHO05D009903 7.5e-07 57.4 54 44.4
arahy.Tifrunner.gnm1.ann1.G424KC Arachis hypogaea HOM05D007829 ORTHO05D009903 1.3e-06 56.6 79 38.0
A01p13730 Brassica napus HOM05D007829 ORTHO05D009903 1.3e-06 56.6 54 42.6
Thhalv10027004m.g Eutrema salsugineum HOM05D007829 ORTHO05D009903 1.3e-06 56.6 79 40.5
BraA01t01318Z Brassica rapa HOM05D007829 ORTHO05D009903 1.7e-06 56.2 80 36.2
VMungo0540G1426 Vigna mungo HOM05D007829 ORTHO05D009903 2.9e-06 55.5 78 35.9


User provided reference genes

Program Settings