Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 3.9e-106 388.3 214 100.0
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 5.6e-105 384.4 214 98.6
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 1.2e-102 376.7 214 96.7
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.0e-77 293.9 215 81.4
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.9e-76 289.7 215 79.5
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 1.6e-75 286.6 212 77.8
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 1.6e-62 243.4 150 91.3
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 3.7e-56 222.2 217 64.1
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 1.8e-55 219.9 202 65.8
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.2e-54 217.2 214 60.7
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 3.8e-53 212.2 208 60.6
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 4.2e-52 208.8 213 61.5
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 4.2e-52 208.8 227 57.3
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 4.0e-50 202.2 214 59.3
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 6.8e-50 201.4 212 57.1
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 1.5e-49 200.3 208 58.2
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 8.3e-48 194.5 212 56.1
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 3.1e-47 192.6 219 54.8
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 5.4e-47 191.8 198 56.1
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 7.0e-47 191.4 270 48.1
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 9.2e-47 191.0 213 54.9
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 4.5e-46 188.7 215 54.9
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 5.9e-46 188.3 218 53.2
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 7.7e-46 188.0 212 55.2
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 7.7e-46 188.0 214 55.1
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 3.8e-45 185.7 213 53.5
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 1.1e-44 184.1 223 52.9
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 9.5e-44 181.0 214 50.0
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 3.6e-43 179.1 214 58.4
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 4.7e-43 178.7 188 52.7
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 6.1e-43 178.3 221 53.8
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 6.1e-43 178.3 212 52.8
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 8.0e-43 177.9 219 53.4
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 3.0e-42 176.0 212 52.8
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 3.0e-42 176.0 213 52.1
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 3.0e-42 176.0 214 48.6
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 5.2e-42 175.3 214 49.5
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 8.9e-42 174.5 215 53.5
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 8.9e-42 174.5 215 53.5
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 8.9e-42 174.5 175 54.9
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 2.6e-41 172.9 224 51.8
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 4.4e-41 172.2 171 59.6
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 5.7e-41 171.8 172 56.4
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 5.7e-41 171.8 224 51.3
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 7.5e-41 171.4 212 52.8
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 7.5e-41 171.4 214 47.7
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 7.5e-41 171.4 215 50.7
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 1.3e-40 170.6 213 48.8
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 1.3e-40 170.6 170 58.8
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 3.7e-40 169.1 181 55.2
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 1.1e-39 167.5 212 48.1
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 1.4e-39 167.2 149 64.4
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 1.4e-39 167.2 156 59.0
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 2.4e-39 166.4 218 46.3
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 1.6e-38 163.7 213 50.2
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 1.6e-38 163.7 170 54.1
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 5.9e-38 161.8 211 50.2
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 1.9e-36 156.8 179 55.9
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 3.6e-35 152.5 214 50.5
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 8.0e-35 151.4 213 44.1
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 1.0e-34 151.0 175 48.6
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 1.0e-34 151.0 169 52.1
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 2.3e-34 149.8 149 61.1
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 4.0e-34 149.1 190 51.1
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 4.0e-34 149.1 170 57.1
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 6.8e-34 148.3 213 45.5
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 6.8e-34 148.3 167 55.1
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 1.2e-33 147.5 151 56.3
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 1.5e-33 147.1 214 48.6
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 1.5e-33 147.1 180 47.2
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 4.4e-33 145.6 179 53.6
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 2.2e-32 143.3 165 52.1
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 2.4e-31 139.8 169 53.3
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 2.4e-31 139.8 174 50.6
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 3.2e-31 139.4 168 49.4
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 3.2e-31 139.4 171 56.1
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 4.1e-31 139.0 168 54.8
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 4.1e-31 139.0 168 54.8
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 4.1e-31 139.0 173 46.2
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 1.3e-29 134.0 166 53.0
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 1.7e-29 133.7 167 54.5
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 1.7e-29 133.7 167 54.5
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 6.6e-29 131.7 224 45.5
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 1.5e-28 130.6 164 52.4
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 2.5e-28 129.8 126 61.9
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 4.3e-28 129.0 168 47.6
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 4.3e-28 129.0 168 47.6
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 9.5e-28 127.9 160 53.8
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 1.2e-27 127.5 193 48.7
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 6.2e-27 125.2 161 47.8
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 1.1e-26 124.4 200 41.5
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 1.4e-26 124.0 154 46.8
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 1.7e-24 117.1 149 48.3
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 6.4e-24 115.2 145 59.3
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 7.1e-23 111.7 145 56.6
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 3.3e-20 102.8 126 47.6
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 1.8e-18 97.1 128 49.2
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 4.0e-18 95.9 165 41.2
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 2.2e-16 90.1 102 48.0
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 2.2e-16 90.1 102 48.0
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 6.0e-14 82.0 212 33.5
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 3.0e-13 79.7 152 37.5
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 3.9e-13 79.3 218 31.7
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 1.9e-12 77.0 186 31.7
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 2.1e-11 73.6 177 42.9
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 3.1e-10 69.7 176 36.9
Mapoly0007s0283 Marchantia polymorpha HOM05D007192 ORTHO05D009034 9.3e-07 58.2 164 34.8
Mapoly0252s0005 Marchantia polymorpha HOM05D007192 ORTHO05D009034 9.3e-07 58.2 164 34.8


User provided reference genes

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