Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g010817.1 Solanum lycopersicum HOM05D022869 ORTHO05D023010 1.6e-95 352.8 186 100.0
PGSC0003DMG400011366 Solanum tuberosum HOM05D022869 ORTHO05D023010 3.3e-61 238.8 145 88.3
Solyc05g010518.1 Solanum lycopersicum HOM05D022869 ORTHO05D023010 1.8e-59 233.0 135 91.9
Sopen09g007310 Solanum pennellii HOM05D000017 ORTHO05D009185 2.4e-35 152.9 88 92.0
Sopen11g025300 Solanum pennellii HOM05D022869 ORTHO05D023010 1.6e-34 150.2 87 90.8
PGSC0003DMG400015475 Solanum tuberosum HOM05D022869 ORTHO05D023010 8.5e-33 144.4 179 53.1
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 2.5e-24 116.3 106 55.7
Sopen02g013230 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-22 109.0 172 40.7
Sopen08g008450 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-22 109.0 172 40.7
Sopen08g030170 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-22 109.0 172 40.7
Sopen09g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-22 109.0 172 40.7
Sopen12g026920 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-22 109.0 172 40.7
Sopen02g003610 Solanum pennellii HOM05D000017 ORTHO05D000013 6.8e-22 108.2 172 40.1
Sopen12g016630 Solanum pennellii HOM05D000017 ORTHO05D000013 6.8e-22 108.2 172 40.1
Sopen10g027790 Solanum pennellii HOM05D006921 ORTHO05D009185 1.5e-21 107.1 184 37.5
Sopen10g022390 Solanum pennellii HOM05D000017 ORTHO05D000013 3.4e-21 105.9 187 39.0
Sopen01g026090 Solanum pennellii HOM05D006921 ORTHO05D009185 5.7e-21 105.1 172 39.0
Sopen02g036070 Solanum pennellii HOM05D000017 ORTHO05D000013 5.7e-21 105.1 172 39.5
Sopen03g005240 Solanum pennellii HOM05D000017 ORTHO05D009185 5.7e-21 105.1 172 39.5
Sopen04g019600 Solanum pennellii HOM05D000017 ORTHO05D000013 5.7e-21 105.1 172 39.5
Sopen04g025160 Solanum pennellii HOM05D000017 ORTHO05D000013 5.7e-21 105.1 172 39.5
Sopen08g012130 Solanum pennellii HOM05D000017 ORTHO05D000013 5.7e-21 105.1 172 39.5
Sopen08g021210 Solanum pennellii HOM05D000017 ORTHO05D000013 5.7e-21 105.1 172 39.5
Sopen12g012540 Solanum pennellii HOM05D000017 ORTHO05D000013 5.7e-21 105.1 172 40.1
Sopen05g025220 Solanum pennellii HOM05D000017 ORTHO05D000013 9.8e-21 104.4 172 39.0
Sopen10g027160 Solanum pennellii HOM05D000017 ORTHO05D000013 9.8e-21 104.4 172 39.0
Sopen06g011350 Solanum pennellii HOM05D000017 ORTHO05D009185 1.7e-20 103.6 172 39.5
Sopen12g021170 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-20 103.6 172 39.0
Peaxi162Scf00136g01915 Petunia axillaris HOM05D006921 ORTHO05D009185 6.3e-20 101.7 67 67.2
Sopen01g027250 Solanum pennellii HOM05D000017 ORTHO05D000013 8.3e-20 101.3 172 39.0
Nitab4.5_0001977g0080 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.4e-19 100.5 172 40.7
Peaxi162Scf00007g00831 Petunia axillaris HOM05D006921 ORTHO05D009185 3.1e-19 99.4 123 46.3
Peaxi162Scf00010g00072 Petunia axillaris HOM05D006921 ORTHO05D009185 9.2e-19 97.8 124 46.0
Sopen10g006650 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-18 97.1 170 37.1
Peaxi162Scf00691g00312 Petunia axillaris HOM05D006921 ORTHO05D009185 1.9e-16 90.1 79 54.4
Peaxi162Scf00268g00039 Petunia axillaris HOM05D006921 ORTHO05D009185 6.1e-15 85.1 101 49.5
Nitab4.5_0000268g0070 Nicotiana tabacum HOM05D006921 ORTHO05D023010 8.0e-15 84.7 102 50.0
Peaxi162Scf00288g01114 Petunia axillaris HOM05D006921 ORTHO05D009185 8.0e-15 84.7 100 46.0
Nitab4.5_0005436g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 5.2e-14 82.0 81 50.6
Peaxi162Scf00176g00082 Petunia axillaris HOM05D000800 ORTHO05D000658 5.2e-14 82.0 56 62.5
Peaxi162Scf00159g00069 Petunia axillaris HOM05D006921 ORTHO05D009185 6.8e-14 81.6 67 53.7
Solyc07g032784.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 6.8e-14 81.6 91 48.4
Nitab4.5_0007593g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 8.9e-14 81.3 109 45.9
Sopen12g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-13 80.9 91 47.3
Peaxi162Scf00591g00515 Petunia axillaris HOM05D006921 ORTHO05D009185 2.0e-13 80.1 146 34.9
Nitab4.5_0005436g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.6e-13 79.7 103 45.6
Nitab4.5_0005016g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 5.8e-13 78.6 84 50.0
Sopen07g022780 Solanum pennellii HOM05D000017 ORTHO05D000013 5.8e-13 78.6 91 46.2
Nitab4.5_0001041g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.3e-12 77.4 99 44.4
Nitab4.5_0004576g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.7e-12 77.0 94 45.7
Solyc12g035525.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 1.7e-12 77.0 152 34.9
Peaxi162Scf00848g00013 Petunia axillaris HOM05D006921 ORTHO05D009185 2.2e-12 76.6 119 37.8
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 2.9e-12 76.3 105 43.8
Nitab4.5_0001001g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 8.3e-12 74.7 134 39.6
Nitab4.5_0009937g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 8.3e-12 74.7 127 42.5
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 1.1e-11 74.3 105 42.9
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-11 74.3 105 42.9
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 1.1e-11 74.3 105 42.9
Sopen11g012650 Solanum pennellii HOM05D000017 ORTHO05D009561 1.1e-11 74.3 105 42.9
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-11 74.3 105 42.9
Peaxi162Scf00145g01531 Petunia axillaris HOM05D006921 ORTHO05D009185 1.4e-11 73.9 131 36.6
Solyc03g044355.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 1.4e-11 73.9 145 36.6
Sopen12g010990 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-11 73.6 89 44.9
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 2.4e-11 73.2 207 30.9
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-11 72.8 105 41.9
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.1e-11 72.4 75 44.0
Sopen01g010980 Solanum pennellii HOM05D000017 ORTHO05D009561 7.0e-11 71.6 102 42.2
Nitab4.5_0002166g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.6e-10 70.5 58 63.8
Nitab4.5_0004599g0050 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.6e-10 70.5 80 48.8
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 1.6e-10 70.5 133 36.8
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-10 70.5 103 43.7
Peaxi162Scf00375g00430 Petunia axillaris HOM05D004064 ORTHO05D009561 2.0e-10 70.1 100 42.0
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-10 70.1 237 28.7
Nitab4.5_0001499g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.7e-10 69.7 108 36.1
Peaxi162Scf00031g02423 Petunia axillaris HOM05D000017 ORTHO05D009561 2.7e-10 69.7 139 38.1
Sopen03g028030 Solanum pennellii HOM05D000017 ORTHO05D009561 2.7e-10 69.7 221 31.2
Sopen10g017570 Solanum pennellii HOM05D000017 ORTHO05D009561 2.7e-10 69.7 105 41.0
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 3.5e-10 69.3 102 41.2
Sopen01g018580 Solanum pennellii HOM05D004064 ORTHO05D009561 4.6e-10 68.9 102 42.2
Nitab4.5_0002244g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.8e-10 68.2 94 40.4
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.8e-10 68.2 94 40.4
Sopen05g013990 Solanum pennellii HOM05D000017 ORTHO05D009185 7.8e-10 68.2 119 37.8
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 7.8e-10 68.2 267 26.2
PGSC0003DMG400029070 Solanum tuberosum HOM05D006921 ORTHO05D009185 7.8e-10 68.2 91 40.7
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.3e-09 67.4 119 37.8
Nitab4.5_0003892g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.7e-09 67.0 78 46.2
Solyc07g017545.1 Solanum lycopersicum HOM05D000017 ORTHO05D009185 1.7e-09 67.0 140 32.9
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 1.7e-09 67.0 89 41.6
PGSC0003DMG400046845 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.7e-09 67.0 65 49.2
Nitab4.5_0001299g0030 Nicotiana tabacum HOM05D006921 ORTHO05D284425 2.3e-09 66.6 65 61.5
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-09 66.6 119 34.5
Sopen05g016460 Solanum pennellii HOM05D000004 ORTHO05D009561 3.0e-09 66.2 77 48.1
CAN.G257.9 Capsicum annuum HOM05D004064 ORTHO05D009561 3.9e-09 65.9 120 36.7
Nitab4.5_0004688g0070 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.9e-09 65.9 137 34.3
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.9e-09 65.9 94 41.5
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.0e-09 65.5 113 38.9
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 5.0e-09 65.5 119 34.5
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 5.0e-09 65.5 119 34.5
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 5.0e-09 65.5 119 34.5
PGSC0003DMG400039926 Solanum tuberosum HOM05D004064 ORTHO05D011910 5.0e-09 65.5 120 37.5
CAN.G4596.1 Capsicum annuum HOM05D004064 ORTHO05D009561 6.6e-09 65.1 139 36.0
Sopen05g015150 Solanum pennellii HOM05D000017 ORTHO05D000013 6.6e-09 65.1 114 36.0
PGSC0003DMG400004103 Solanum tuberosum HOM05D004064 ORTHO05D009561 6.6e-09 65.1 94 38.3
CAN.G1759.4 Capsicum annuum HOM05D004064 ORTHO05D009561 1.1e-08 64.3 106 38.7
Nitab4.5_0002845g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.1e-08 64.3 89 42.7
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.1e-08 64.3 88 42.0
CAN.G53.40 Capsicum annuum HOM05D004064 ORTHO05D009561 1.5e-08 63.9 117 39.3
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 1.5e-08 63.9 102 39.2
Sopen03g017620 Solanum pennellii HOM05D004064 ORTHO05D009561 1.5e-08 63.9 231 26.0
Peaxi162Scf01238g00022 Petunia axillaris HOM05D004064 ORTHO05D009561 1.9e-08 63.5 80 37.5
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 1.9e-08 63.5 122 36.9
Sopen11g010850 Solanum pennellii HOM05D000017 ORTHO05D009561 1.9e-08 63.5 103 41.7
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 2.5e-08 63.2 146 31.5
Nitab4.5_0004918g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.3e-08 62.8 40 72.5
Sopen10g011860 Solanum pennellii HOM05D004064 ORTHO05D009561 3.3e-08 62.8 145 33.8
Solyc06g007395.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 5.6e-08 62.0 125 36.0
Sopen09g011110 Solanum pennellii HOM05D000017 ORTHO05D011910 5.6e-08 62.0 119 32.8
Sopen12g025840 Solanum pennellii HOM05D000014 ORTHO05D011910 5.6e-08 62.0 103 34.0
Peaxi162Scf00566g00021 Petunia axillaris HOM05D004064 ORTHO05D009561 7.3e-08 61.6 100 38.0
Nitab4.5_0000804g0120 Nicotiana tabacum HOM05D006921 ORTHO05D009185 9.5e-08 61.2 158 31.6
Peaxi162Scf00553g00217 Petunia axillaris HOM05D004064 ORTHO05D009561 9.5e-08 61.2 106 36.8
Solyc11g017105.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 9.5e-08 61.2 110 34.5
Peaxi162Scf00579g00618 Petunia axillaris HOM05D006921 ORTHO05D009185 1.6e-07 60.5 138 34.8
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 1.6e-07 60.5 167 28.7
Nitab4.5_0008390g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.7e-07 58.9 65 43.1
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.7e-07 58.9 140 32.9
Nitab4.5_0007178g0020 Nicotiana tabacum HOM05D006921 ORTHO05D001349 6.2e-07 58.5 88 39.8
Peaxi162Scf00296g00035 Petunia axillaris HOM05D004064 ORTHO05D009561 6.2e-07 58.5 75 44.0
Sopen05g002620 Solanum pennellii HOM05D000017 ORTHO05D011910 6.2e-07 58.5 101 33.7
Peaxi162Scf00022g00611 Petunia axillaris HOM05D004064 ORTHO05D009561 8.0e-07 58.2 110 36.4
Peaxi162Scf00270g00413 Petunia axillaris HOM05D004064 ORTHO05D009561 8.0e-07 58.2 119 35.3
PGSC0003DMG400026053 Solanum tuberosum HOM05D004064 ORTHO05D009561 8.0e-07 58.2 136 32.4
Nitab4.5_0000025g0440 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.4e-06 57.4 69 50.7
Sopen01g011730 Solanum pennellii HOM05D004064 ORTHO05D009561 1.4e-06 57.4 145 34.5
Sopen06g016100 Solanum pennellii HOM05D004064 ORTHO05D009561 1.4e-06 57.4 147 32.7
Nitab4.5_0002898g0120 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.8e-06 57.0 139 31.7
Sopen04g020440 Solanum pennellii HOM05D000017 ORTHO05D001349 1.8e-06 57.0 112 31.2
PGSC0003DMG400004104 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.8e-06 57.0 132 32.6
Nitab4.5_0000022g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.3e-06 56.6 104 39.4
Nitab4.5_0000104g0090 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.3e-06 56.6 94 39.4
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 2.3e-06 56.6 119 31.9
Nitab4.5_0000231g0100 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.1e-06 56.2 95 41.1
Peaxi162Scf00062g00106 Petunia axillaris HOM05D006921 ORTHO05D009185 3.1e-06 56.2 102 37.3
Peaxi162Scf00258g00412 Petunia axillaris HOM05D006921 ORTHO05D009185 3.1e-06 56.2 67 49.3
Solyc07g042497.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 3.1e-06 56.2 105 31.4
Sopen08g012180 Solanum pennellii HOM05D000002 ORTHO05D009185 3.1e-06 56.2 171 29.8
Sopen10g010720 Solanum pennellii HOM05D000017 ORTHO05D009561 3.1e-06 56.2 172 30.2
Nitab4.5_0001601g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.0e-06 55.8 104 40.4
Peaxi162Scf00092g00032 Petunia axillaris HOM05D000017 ORTHO05D000372 4.0e-06 55.8 105 36.2
Peaxi162Scf00135g01010 Petunia axillaris HOM05D000017 ORTHO05D001349 4.0e-06 55.8 105 36.2
Peaxi162Scf00157g01537 Petunia axillaris HOM05D000017 ORTHO05D001349 4.0e-06 55.8 105 36.2
Nitab4.5_0001276g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.2e-06 55.5 92 42.4
Nitab4.5_0008516g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.2e-06 55.5 76 36.8
Peaxi162Scf00897g00039 Petunia axillaris HOM05D000017 ORTHO05D001349 5.2e-06 55.5 99 35.4
Nitab4.5_0000113g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 6.8e-06 55.1 89 38.2
Peaxi162Scf00067g10116 Petunia axillaris HOM05D003329 ORTHO05D006664 6.8e-06 55.1 163 31.9
Peaxi162Scf00318g00410 Petunia axillaris HOM05D003329 ORTHO05D006664 6.8e-06 55.1 163 31.9
Peaxi162Scf00505g00213 Petunia axillaris HOM05D000017 ORTHO05D001349 6.8e-06 55.1 105 36.2
Sopen12g028900 Solanum pennellii HOM05D037232 ORTHO05D009561 6.8e-06 55.1 88 38.6
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 8.9e-06 54.7 65 43.1
PGSC0003DMG400029950 Solanum tuberosum HOM05D000017 ORTHO05D009185 8.9e-06 54.7 148 29.7


User provided reference genes

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