Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g010320.1 Solanum lycopersicum HOM05D007989 ORTHO05D010087 2.2e-81 305.8 186 100.0
Sopen11g005100 Solanum pennellii HOM05D007989 ORTHO05D010087 7.9e-79 297.4 189 95.8
PGSC0003DMG401016146 Solanum tuberosum HOM05D007989 ORTHO05D010087 7.9e-79 297.4 189 92.1
CAN.G905.6 Capsicum annuum HOM05D007989 ORTHO05D010087 7.9e-63 244.2 197 72.6
Nitab4.5_0005930g0030 Nicotiana tabacum HOM05D007989 ORTHO05D010087 3.3e-53 212.2 199 60.8
Nitab4.5_0000241g0120 Nicotiana tabacum HOM05D007989 ORTHO05D010087 1.7e-52 209.9 200 61.5
Dinv08871 Davidia involucrata HOM05D007989 ORTHO05D010087 7.5e-29 131.3 204 47.5
CiPaw.04G104100 Carya illinoinensis HOM05D007989 ORTHO05D010087 1.0e-25 120.9 210 45.7
QL06p047951 Quercus lobata HOM05D007989 ORTHO05D010087 1.9e-24 116.7 213 43.7
TWI53G0073 Tripterygium wilfordii HOM05D007989 ORTHO05D010087 2.1e-23 113.2 190 41.1
Haze_24825 Corylus avellana HOM05D007989 ORTHO05D010087 6.1e-23 111.7 200 40.0
Haze_24830 Corylus avellana HOM05D007989 ORTHO05D010087 6.1e-23 111.7 200 40.0
Prupe.6G193900 Prunus persica HOM05D007989 ORTHO05D010087 8.0e-23 111.3 213 35.7
CiPaw.03G146300 Carya illinoinensis HOM05D007989 ORTHO05D010087 1.8e-22 110.2 207 39.6
Cfa002588 Carpinus fangiana HOM05D007989 ORTHO05D010087 6.8e-22 108.2 204 40.2
Thecc.01G095100 Theobroma cacao HOM05D007989 ORTHO05D010087 6.8e-22 108.2 208 39.9
FAN26G0087 Fragaria x ananassa HOM05D007989 ORTHO05D010087 1.2e-21 107.5 203 37.9
MD01G1036700 Malus domestica HOM05D007989 ORTHO05D010087 1.2e-21 107.5 204 34.3
Cpa.g.sc55.66 Carica papaya HOM05D007989 ORTHO05D010087 2.6e-21 106.3 203 40.4
FAN23G0861 Fragaria x ananassa HOM05D007989 ORTHO05D010087 7.5e-21 104.8 203 36.9
FvH4_1g20210 Fragaria vesca HOM05D007989 ORTHO05D010087 1.3e-20 104.0 203 36.5
Atru.chr3.1338 Acer truncatum HOM05D007989 ORTHO05D010087 1.7e-20 103.6 202 41.6
FAN19G2348 Fragaria x ananassa HOM05D007989 ORTHO05D010087 1.7e-20 103.6 203 36.5
RcHm_v2.0_Chr2g0112271 Rosa chinensis HOM05D007989 ORTHO05D010087 2.8e-20 102.8 202 36.6
Duzib147G0239 Durio zibethinus HOM05D007989 ORTHO05D010087 4.9e-20 102.1 197 37.1
MBI06_g03317_MAGBIO Magnolia biondii HOM05D007989 ORTHO05D010087 8.3e-20 101.3 184 39.7
FAN28G0040 Fragaria x ananassa HOM05D007989 ORTHO05D010087 1.4e-19 100.5 200 37.0
COL.COLO4_27300 Corchorus olitorius HOM05D007989 ORTHO05D010087 1.8e-19 100.1 173 38.2
Migut.H02322 Erythranthe guttata HOM05D007989 ORTHO05D010087 7.0e-19 98.2 188 38.8
Gohir.D03G040900 Gossypium hirsutum HOM05D007989 ORTHO05D010087 1.6e-18 97.1 189 37.0
MD15G1317900 Malus domestica HOM05D007989 ORTHO05D010087 2.7e-18 96.3 203 33.5
Gohir.A02G130000 Gossypium hirsutum HOM05D007989 ORTHO05D010087 3.5e-18 95.9 189 37.0
AUR62027199 Chenopodium quinoa HOM05D007989 ORTHO05D010087 4.5e-18 95.5 198 36.4
Gorai.003G041700 Gossypium raimondii HOM05D007989 ORTHO05D010087 4.5e-18 95.5 189 37.0
Rhsim10G0168900 Rhododendron simsii HOM05D007989 ORTHO05D010087 5.9e-18 95.1 114 49.1
EL10Ac6g14814 Beta vulgaris HOM05D007989 ORTHO05D010087 7.8e-18 94.7 166 38.6
Ciclev10026467m.g Citrus clementina HOM05D007989 ORTHO05D010087 7.8e-18 94.7 194 35.6
CANSAT01G0464 Cannabis sativa HOM05D007989 ORTHO05D010087 1.0e-17 94.4 188 36.7
Potri.007G097400 Populus trichocarpa HOM05D007989 ORTHO05D010087 1.3e-17 94.0 150 43.3
Hma1.2p1_0019F.1_g013880 Hydrangea macrophylla HOM05D007989 ORTHO05D010087 2.3e-17 93.2 146 39.0
Manes.13G097300 Manihot esculenta HOM05D007989 ORTHO05D010087 3.3e-16 89.4 184 39.1
Glyma.18G014700 Glycine max HOM05D007989 ORTHO05D010087 5.6e-16 88.6 182 36.8
Aqoxy6G00707 Aquilegia oxysepala HOM05D007989 ORTHO05D010087 7.3e-16 88.2 176 35.8
Phvul.001G254200 Phaseolus vulgaris HOM05D007989 ORTHO05D010087 9.5e-16 87.8 170 39.4
Sabra05G0058400 Salix brachista HOM05D007989 ORTHO05D010087 1.6e-15 87.0 208 31.2
vmacro12990 Vaccinium macrocarpon HOM05D007989 ORTHO05D010087 2.1e-15 86.7 113 44.2
Nn1g05466 Nelumbo nucifera HOM05D007989 ORTHO05D010087 2.8e-15 86.3 199 34.2
VMungo1383G0535 Vigna mungo HOM05D007989 ORTHO05D010087 2.8e-15 86.3 208 35.6
Glyma.11G242400 Glycine max HOM05D007989 ORTHO05D010087 3.6e-15 85.9 128 43.0
Potri.005G071400 Populus trichocarpa HOM05D007989 ORTHO05D010087 6.1e-15 85.1 208 31.7
arahy.Tifrunner.gnm1.ann1.92LXSJ Arachis hypogaea HOM05D007989 ORTHO05D010087 8.0e-15 84.7 165 39.4
Oeu002158.1 Olea europaea HOM05D007989 ORTHO05D010087 4.0e-14 82.4 121 42.1
Actinidia06535 Actinidia chinensis HOM05D007989 ORTHO05D010087 6.8e-14 81.6 114 45.6
arahy.Tifrunner.gnm1.ann1.FU6RJX Arachis hypogaea HOM05D007989 ORTHO05D010087 6.8e-14 81.6 167 38.3
PSO541G3922 Papaver somniferum HOM05D007989 ORTHO05D010087 6.8e-14 81.6 186 35.5
PGR004G2401 Punica granatum HOM05D007989 ORTHO05D010087 6.8e-14 81.6 160 35.0
TAR628G0250 Trochodendron aralioides HOM05D007989 ORTHO05D010087 6.8e-14 81.6 170 34.7
PSO675G2967 Papaver somniferum HOM05D007989 ORTHO05D010087 2.6e-13 79.7 188 31.9
Ca_30637_v3 Cicer arietinum L. HOM05D007989 ORTHO05D010087 3.4e-13 79.3 163 36.8
Sabra07G0080700 Salix brachista HOM05D007989 ORTHO05D010087 3.4e-13 79.3 111 44.1
TPR.G30536 Trifolium pratense HOM05D007989 ORTHO05D010087 9.8e-13 77.8 170 35.9
Lj6g0026253 Lotus japonicus HOM05D007989 ORTHO05D010087 4.9e-12 75.5 139 38.8
Lalb_Chr08g0230941 Lupinus albus HOM05D007989 ORTHO05D010087 3.2e-11 72.8 112 40.2
Medtr3g086760 Medicago truncatula HOM05D007989 ORTHO05D010087 4.1e-11 72.4 169 35.5
Psat1g083960 Pisum sativum HOM05D007989 ORTHO05D010087 7.0e-11 71.6 158 38.0
ClCG10G008400 Citrullus lanatus HOM05D007989 ORTHO05D010087 3.0e-09 66.2 96 44.8
CsaV3_4G009020 Cucumis sativus L. HOM05D007989 ORTHO05D010087 3.0e-09 66.2 176 38.6
MELO3C018999.2 Cucumis melo HOM05D007989 ORTHO05D010087 5.0e-09 65.5 145 43.4
AT2G46550 Arabidopsis thaliana HOM05D002476 ORTHO05D002652 6.6e-09 65.1 152 32.2
CARHR141890 Cardamine hirsuta HOM05D002476 ORTHO05D002652 8.6e-09 64.7 136 33.8
Sc16g0000320 Simmondsia chinensis HOM05D007989 ORTHO05D010087 1.1e-08 64.3 135 33.3
Aa31LG1G27930 Aethionema arabicum HOM05D002476 ORTHO05D002652 3.3e-08 62.8 133 34.6
HPP92_002319 Vanilla planifolia HOM05D007989 ORTHO05D010087 3.3e-08 62.8 144 30.6
BraA04t18904Z Brassica rapa HOM05D002476 ORTHO05D002652 4.3e-08 62.4 145 33.1
A04p34460 Brassica napus HOM05D002476 ORTHO05D002652 7.3e-08 61.6 145 32.4
BcaC02g07040 Brassica carinata HOM05D002476 ORTHO05D002652 9.5e-08 61.2 134 33.6
BcaNung06659 Brassica carinata HOM05D002476 ORTHO05D002652 9.5e-08 61.2 134 33.6
C05p00710 Brassica napus HOM05D002476 ORTHO05D002652 1.2e-07 60.8 145 31.0
BolC4t28710H Brassica oleracea HOM05D002476 ORTHO05D002652 1.2e-07 60.8 135 33.3
Carub.0004s2927 Capsella rubella HOM05D002476 ORTHO05D002652 1.6e-07 60.5 144 31.9
Sp4g28600 Schrenkiella parvula HOM05D002476 ORTHO05D002652 1.6e-07 60.5 153 30.7
A05p01220 Brassica napus HOM05D002476 ORTHO05D002652 2.1e-07 60.1 150 32.0
A10p00670 Brassica napus HOM05D002476 ORTHO05D002652 2.1e-07 60.1 145 30.3
Thhalv10001490m.g Eutrema salsugineum HOM05D002476 ORTHO05D002652 2.1e-07 60.1 150 30.7
BraA05t19123Z Brassica rapa HOM05D002476 ORTHO05D002652 2.8e-07 59.7 150 32.0
Zm00001eb033460 Zea mays HOM05D007989 ORTHO05D010087 2.8e-07 59.7 144 31.9
BcaC02g07017 Brassica carinata HOM05D002476 ORTHO05D002652 4.7e-07 58.9 137 33.6
BcaC02g12672 Brassica carinata HOM05D002476 ORTHO05D002652 4.7e-07 58.9 150 31.3
Aa31LG1G10610 Aethionema arabicum HOM05D002476 ORTHO05D002652 6.2e-07 58.5 110 36.4
Gorai.001G153700 Gossypium raimondii HOM05D002476 ORTHO05D002652 6.2e-07 58.5 169 30.8
BraA10t42344Z Brassica rapa HOM05D002476 ORTHO05D002652 8.0e-07 58.2 129 31.0
CDE10G0158 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 1.1e-06 57.8 162 29.6
AL1G11220 Arabidopsis lyrata HOM05D002476 ORTHO05D002652 1.8e-06 57.0 147 30.6
Gohir.D07G142033 Gossypium hirsutum HOM05D002476 ORTHO05D002652 1.8e-06 57.0 169 29.6
AL4G45980 Arabidopsis lyrata HOM05D002476 ORTHO05D002652 2.3e-06 56.6 153 29.4
C04p72220 Brassica napus HOM05D002476 ORTHO05D002652 3.1e-06 56.2 139 32.4
Sp1g01040 Schrenkiella parvula HOM05D002476 ORTHO05D002652 3.1e-06 56.2 148 29.1
AT1G01240 Arabidopsis thaliana HOM05D002476 ORTHO05D002652 4.0e-06 55.8 201 29.4
BraA09t42240Z Brassica rapa HOM05D002476 ORTHO05D002652 5.2e-06 55.5 132 31.8
Ca_12783_v3 Cicer arietinum L. HOM05D002476 ORTHO05D002652 5.2e-06 55.5 114 33.3
Ca_12787_v3 Cicer arietinum L. HOM05D002476 ORTHO05D002652 5.2e-06 55.5 114 33.3
Ca_29819_v3 Cicer arietinum L. HOM05D002476 ORTHO05D002652 5.2e-06 55.5 114 33.3
BcaC02g12678 Brassica carinata HOM05D004435 ORTHO05D005103 6.8e-06 55.1 152 30.3
CARHR001220 Cardamine hirsuta HOM05D002476 ORTHO05D002652 6.8e-06 55.1 147 29.9
Ca_16505_v3 Cicer arietinum L. HOM05D007989 ORTHO05D010087 6.8e-06 55.1 115 33.9


User provided reference genes

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