Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g008120.3 Solanum lycopersicum HOM05D005539 ORTHO05D006644 1.6e-217 759.2 395 100.0
Sopen11g010350 Solanum pennellii HOM05D005539 ORTHO05D006644 3.0e-213 745.0 395 98.2
Solyc11g020190.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 3.4e-212 741.5 395 98.0
CAN.G1694.1 Capsicum annuum HOM05D005539 ORTHO05D006644 5.6e-191 671.0 395 89.6
Peaxi162Scf00825g00123 Petunia axillaris HOM05D005539 ORTHO05D006644 3.5e-185 651.7 391 85.4
Hma1.2p1_0703F.1_g206530 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 7.4e-151 537.7 394 70.3
Dinv17986 Davidia involucrata HOM05D005539 ORTHO05D006644 9.3e-146 520.8 394 69.3
MSTRG.8325 Avicennia marina HOM05D005539 ORTHO05D006644 1.5e-140 503.4 395 66.3
Actinidia29697 Actinidia chinensis HOM05D005539 ORTHO05D006644 1.0e-139 500.7 398 66.8
GSVIVG01032835001 Vitis vinifera HOM05D005539 ORTHO05D006644 1.7e-139 500.0 394 65.7
Actinidia33928 Actinidia chinensis HOM05D005539 ORTHO05D006644 4.9e-139 498.4 394 65.7
TAR369G0030 Trochodendron aralioides HOM05D005539 ORTHO05D006644 1.9e-138 496.5 394 66.2
Lj8A68G37 Lonicera japonica HOM05D005539 ORTHO05D006644 4.6e-137 491.9 396 64.9
Cc02_g06620 Coffea canephora HOM05D005539 ORTHO05D006644 8.2e-134 481.1 395 64.6
Duzib106G1755 Durio zibethinus HOM05D005539 ORTHO05D006644 3.1e-133 479.2 394 64.0
Oeu064386.1 Olea europaea HOM05D005539 ORTHO05D006644 4.5e-132 475.3 393 64.6
CSS0043358 Camellia sinensis var. sinensis HOM05D005539 ORTHO05D006644 1.0e-131 474.2 394 66.0
Prupe.2G249200 Prunus persica HOM05D005539 ORTHO05D006644 1.0e-131 474.2 394 63.7
Ciclev10030725m.g Citrus clementina HOM05D005539 ORTHO05D006644 1.3e-131 473.8 394 62.4
COL.COLO4_25704 Corchorus olitorius HOM05D005539 ORTHO05D006644 1.3e-131 473.8 397 62.2
FvH4_7g24380 Fragaria vesca HOM05D005539 ORTHO05D006644 2.9e-131 472.6 395 63.3
FAN06G2075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.9e-131 472.6 395 63.3
FAN10G4325 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.9e-131 472.6 395 63.3
FAN01G2659 Fragaria x ananassa HOM05D005539 ORTHO05D006644 6.5e-131 471.5 395 63.3
Rhsim09G0176800 Rhododendron simsii HOM05D005539 ORTHO05D006644 1.4e-130 470.3 393 65.1
FAN10G0075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 4.2e-130 468.8 395 62.8
Gohir.A10G235300 Gossypium hirsutum HOM05D005539 ORTHO05D006644 4.2e-130 468.8 396 62.9
Atru.chr12.24 Acer truncatum HOM05D005539 ORTHO05D006644 7.2e-130 468.0 394 63.2
Gohir.D10G247700 Gossypium hirsutum HOM05D005539 ORTHO05D006644 1.2e-129 467.2 393 63.1
Gorai.011G286200 Gossypium raimondii HOM05D005539 ORTHO05D006644 2.1e-129 466.5 393 63.1
MD01G1152200 Malus domestica HOM05D005539 ORTHO05D006644 2.7e-129 466.1 396 63.6
RcHm_v2.0_Chr1g0370081 Rosa chinensis HOM05D005539 ORTHO05D006644 3.6e-129 465.7 395 63.3
Cfa001325 Carpinus fangiana HOM05D005539 ORTHO05D006644 7.9e-129 464.5 396 61.9
CiPaw.01G297900 Carya illinoinensis HOM05D005539 ORTHO05D006644 1.0e-128 464.2 394 61.2
Cpa.g.sc19.181 Carica papaya HOM05D005539 ORTHO05D006644 6.7e-128 461.5 394 61.4
Manes.10G013600 Manihot esculenta HOM05D005539 ORTHO05D006644 6.7e-128 461.5 394 61.9
CANSAT56G2522 Cannabis sativa HOM05D005539 ORTHO05D006644 8.8e-128 461.1 395 62.3
Thecc.10G020000 Theobroma cacao HOM05D005539 ORTHO05D006644 1.1e-127 460.7 394 61.9
FAN03G1336 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.5e-127 460.3 395 62.0
Haze_17219 Corylus avellana HOM05D005539 ORTHO05D006644 8.2e-126 454.5 424 57.5
DCAR_011807 Daucus carota HOM05D005539 ORTHO05D006644 4.1e-125 452.2 394 62.4
Nn2g13702 Nelumbo nucifera HOM05D005539 ORTHO05D006644 5.3e-125 451.8 396 60.4
ECA238G2434 Erigeron canadensis HOM05D005539 ORTHO05D006644 2.0e-124 449.9 394 61.4
Migut.F01380 Erythranthe guttata HOM05D005539 ORTHO05D006644 3.4e-124 449.1 398 61.8
vmacro10051 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 3.4e-124 449.1 393 62.3
Eucgr.J00217 Eucalyptus grandis HOM05D005539 ORTHO05D006644 7.7e-124 448.0 394 59.1
Hma1.2p1_0703F.1_g206540 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 7.7e-124 448.0 312 72.4
Lsat_1_v5_gn_2_122921 Lactuca sativa HOM05D005539 ORTHO05D006644 1.0e-123 447.6 393 60.1
FAN06G5029 Fragaria x ananassa HOM05D005539 ORTHO05D006644 3.8e-123 445.7 397 60.7
Hund15944 Selenicereus undatus HOM05D005539 ORTHO05D006644 1.1e-122 444.1 394 58.1
Potri.010G189700 Populus trichocarpa HOM05D005539 ORTHO05D006644 1.4e-122 443.7 394 59.9
Potri.008G067600 Populus trichocarpa HOM05D005539 ORTHO05D006644 2.5e-122 443.0 394 59.6
AUR62022871 Chenopodium quinoa HOM05D005539 ORTHO05D006644 7.2e-122 441.4 397 57.7
Glyma.11G229000 Glycine max HOM05D005539 ORTHO05D006644 4.7e-121 438.7 395 60.3
Sed0009998 Sechium edule HOM05D005539 ORTHO05D006644 4.7e-121 438.7 399 57.1
vmacro10050 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 1.0e-120 437.6 392 63.0
HanXRQChr14g0459831 Helianthus annuus HOM05D005539 ORTHO05D006644 1.4e-120 437.2 394 59.4
AUR62012239 Chenopodium quinoa HOM05D005539 ORTHO05D006644 2.3e-120 436.4 394 57.1
Ah.04g164520 Amaranthus hybridus HOM05D005539 ORTHO05D006644 3.0e-120 436.0 391 58.3
Lalb_Chr15g0084151 Lupinus albus HOM05D005539 ORTHO05D006644 8.8e-120 434.5 398 58.8
EL10Ac2g04818 Beta vulgaris HOM05D005539 ORTHO05D006644 1.1e-119 434.1 397 57.7
arahy.Tifrunner.gnm1.ann1.W7ADHZ Arachis hypogaea HOM05D005539 ORTHO05D006644 5.7e-119 431.8 395 59.7
arahy.Tifrunner.gnm1.ann1.4ME2IF Arachis hypogaea HOM05D005539 ORTHO05D006644 1.7e-118 430.3 395 60.3
Phvul.001G242300 Phaseolus vulgaris HOM05D005539 ORTHO05D006644 2.2e-118 429.9 395 59.2
ClCG07G004120 Citrullus lanatus HOM05D005539 ORTHO05D006644 4.8e-118 428.7 399 55.9
VMungo1383G3500 Vigna mungo HOM05D005539 ORTHO05D006644 6.3e-118 428.3 395 58.5
Aqoxy4G02586 Aquilegia oxysepala HOM05D005539 ORTHO05D006644 8.2e-118 427.9 397 56.7
Sabra10G0146300 Salix brachista HOM05D005539 ORTHO05D006644 1.1e-117 427.6 417 55.9
THA.LOC104826852 Tarenaya hassleriana HOM05D005539 ORTHO05D006644 1.8e-117 426.8 396 57.6
TPR.G2533 Trifolium pratense HOM05D005539 ORTHO05D006644 3.1e-117 426.0 395 58.0
Medtr3g070390 Medicago truncatula HOM05D005539 ORTHO05D006644 1.5e-116 423.7 396 58.3
PSO339G2908 Papaver somniferum HOM05D005539 ORTHO05D006644 7.7e-116 421.4 395 55.7
Lj6g0015972 Lotus japonicus HOM05D005539 ORTHO05D006644 1.0e-115 421.0 395 58.5
PGR044G2440 Punica granatum HOM05D005539 ORTHO05D006644 1.3e-115 420.6 396 59.8
CsaV3_5G010080 Cucumis sativus L. HOM05D005539 ORTHO05D006644 3.8e-115 419.1 399 55.4
MELO3C025184.2 Cucumis melo HOM05D005539 ORTHO05D006644 3.2e-114 416.0 399 54.9
FAN06G4384 Fragaria x ananassa HOM05D005539 ORTHO05D006644 7.4e-111 404.8 395 56.7
SGA_v2.0_scaffold76G25107 Striga asiatica HOM05D005539 ORTHO05D006644 1.3e-110 404.1 478 49.8
Psat5g128120 Pisum sativum HOM05D005539 ORTHO05D006644 1.7e-110 403.7 397 57.2
Ca_15119_v3 Cicer arietinum L. HOM05D005539 ORTHO05D006644 1.1e-109 401.0 395 56.5
AT5G05680 Arabidopsis thaliana HOM05D005539 ORTHO05D006644 5.0e-107 392.1 398 53.5
AL6G15570 Arabidopsis lyrata HOM05D005539 ORTHO05D006644 1.1e-106 391.0 398 52.5
Carub.0006s0457 Capsella rubella HOM05D005539 ORTHO05D006644 9.4e-106 387.9 401 53.1
Sc14g0005370 Simmondsia chinensis HOM05D005539 ORTHO05D006644 4.7e-105 385.6 368 54.9
A10p30680 Brassica napus HOM05D005539 ORTHO05D006644 1.4e-104 384.0 402 52.7
BraA10t45109Z Brassica rapa HOM05D005539 ORTHO05D006644 1.4e-104 384.0 402 52.7
Sp6g37210 Schrenkiella parvula HOM05D005539 ORTHO05D006644 1.4e-104 384.0 398 53.0
PSO384G3240 Papaver somniferum HOM05D005539 ORTHO05D006644 2.3e-104 383.3 391 53.5
BcaC06g32275 Brassica carinata HOM05D005539 ORTHO05D006644 3.0e-104 382.9 398 52.0
BolC9t59878H Brassica oleracea HOM05D005539 ORTHO05D006644 7.5e-103 378.3 399 51.9
C09p71160 Brassica napus HOM05D005539 ORTHO05D006644 9.7e-103 377.9 399 51.6
CARHR207600 Cardamine hirsuta HOM05D005539 ORTHO05D006644 4.5e-100 369.0 397 51.1
Thhalv10012715m.g Eutrema salsugineum HOM05D005539 ORTHO05D006644 1.3e-99 367.5 398 50.3
Sc14g0005420 Simmondsia chinensis HOM05D005539 ORTHO05D006644 1.2e-97 360.9 374 53.2
Dinv17988 Davidia involucrata HOM05D005539 ORTHO05D006644 4.7e-97 359.0 309 62.1
unitig_0.g238 Utricularia gibba HOM05D005539 ORTHO05D006644 8.0e-97 358.2 378 52.1
Aa31LG11G6690 Aethionema arabicum HOM05D005539 ORTHO05D006644 6.8e-96 355.1 395 51.4
CDE04G1676 Ceratophyllum demersum HOM05D005539 ORTHO05D006644 6.8e-96 355.1 399 48.9
BcaB05g21701 Brassica carinata HOM05D005539 ORTHO05D006644 1.5e-90 337.4 396 49.5
ATR0193G007 Amborella trichopoda HOM05D005539 ORTHO05D006644 1.9e-90 337.0 405 48.4
HanXRQChr13g0392111 Helianthus annuus HOM05D005539 ORTHO05D006644 9.8e-87 324.7 310 58.4
Glyma.18G028233 Glycine max HOM05D005539 ORTHO05D006644 7.8e-84 315.1 276 60.5
HPP92_019887 Vanilla planifolia HOM05D005539 ORTHO05D006644 1.5e-82 310.8 361 48.2
Zm00001eb430560 Zea mays HOM05D005539 ORTHO05D006644 8.9e-80 301.6 404 44.3
Os04g0608400 Oryza sativa ssp. japonica HOM05D005539 ORTHO05D006644 1.4e-77 294.3 407 44.7
Nitab4.5_0001171g0030 Nicotiana tabacum HOM05D005539 ORTHO05D006644 1.2e-71 274.6 171 87.7
BcaC06g32273 Brassica carinata HOM05D005539 ORTHO05D006644 7.5e-71 271.9 401 42.6
SEGI_35888 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 2.2e-70 270.4 373 40.5
SHI03446 Sapria himalayana HOM05D005539 ORTHO05D006644 3.2e-69 266.5 227 58.1
Nitab4.5_0003886g0090 Nicotiana tabacum HOM05D005539 ORTHO05D006644 5.4e-69 265.8 171 84.8
MD07G1220900 Malus domestica HOM05D005539 ORTHO05D006644 1.4e-48 198.0 175 60.0
AagrBONN_evm.TU.Sc2ySwM_362.2924 Anthoceros agrestis HOM05D005539 ORTHO05D006644 4.9e-46 189.5 376 34.0
Mapoly0043s0044 Marchantia polymorpha HOM05D005539 ORTHO05D006644 4.2e-45 186.4 395 31.9
Pp3c6_24520 Physcomitrium patens HOM05D005539 ORTHO05D006644 3.5e-44 183.3 389 31.4
HPP92_019878 Vanilla planifolia HOM05D005539 ORTHO05D006644 1.6e-41 174.5 218 47.2
Sabra08G0049700 Salix brachista HOM05D005539 ORTHO05D006644 9.9e-39 165.2 218 48.6
vmacro22159 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 8.7e-35 152.1 223 43.9
SEGI_27471 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 1.5e-15 88.2 80 51.2
CBR_g22013 Chara braunii HOM05D005539 ORTHO05D006644 6.3e-09 66.2 390 23.3


User provided reference genes

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