Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g008060.1 Solanum lycopersicum HOM05D006212 ORTHO05D008245 2.1e-177 625.5 307 100.0
Sopen11g003910 Solanum pennellii HOM05D006212 ORTHO05D008245 1.2e-161 573.2 300 94.3
CAN.G459.26 Capsicum annuum HOM05D006212 ORTHO05D008245 9.5e-138 493.8 300 84.0
Nitab4.5_0007723g0030 Nicotiana tabacum HOM05D006212 ORTHO05D008245 9.8e-127 457.2 287 80.8
Nitab4.5_0004987g0060 Nicotiana tabacum HOM05D006212 ORTHO05D008245 7.3e-98 361.3 216 81.5
Peaxi162Scf00982g00216 Petunia axillaris HOM05D006212 ORTHO05D008245 3.9e-91 339.0 190 84.7
Nn6g35226 Nelumbo nucifera HOM05D006212 ORTHO05D008245 5.1e-91 338.6 297 59.3
Rhsim09G0146100 Rhododendron simsii HOM05D006212 ORTHO05D008245 5.1e-91 338.6 289 60.2
Gohir.D05G290200 Gossypium hirsutum HOM05D006212 ORTHO05D008245 7.4e-90 334.7 266 63.9
Gorai.009G305300 Gossypium raimondii HOM05D006212 ORTHO05D008245 3.6e-89 332.4 266 63.9
QL08p053276 Quercus lobata HOM05D006212 ORTHO05D008245 4.8e-89 332.0 238 63.9
vmacro10255 Vaccinium macrocarpon HOM05D006212 ORTHO05D008245 8.1e-89 331.3 302 58.6
Cc02_g10690 Coffea canephora HOM05D006212 ORTHO05D008245 1.4e-88 330.5 291 60.8
Prupe.2G205800 Prunus persica HOM05D006212 ORTHO05D008245 1.8e-88 330.1 236 65.3
Oeu016301.1 Olea europaea HOM05D006212 ORTHO05D008245 2.4e-88 329.7 288 58.7
Lj2C23T6 Lonicera japonica HOM05D006212 ORTHO05D008245 3.1e-88 329.3 291 58.1
Thecc.10G087900 Theobroma cacao HOM05D006212 ORTHO05D008245 3.1e-88 329.3 286 59.4
Haze_16761 Corylus avellana HOM05D006212 ORTHO05D008245 9.0e-88 327.8 237 64.1
COL.COLO4_09860 Corchorus olitorius HOM05D006212 ORTHO05D008245 1.5e-87 327.0 212 70.8
Cpa.g.sc53.156 Carica papaya HOM05D006212 ORTHO05D008245 7.6e-87 324.7 242 64.5
Potri.010G229300 Populus trichocarpa HOM05D006212 ORTHO05D008245 1.3e-86 323.9 241 63.5
Duzib114G0641 Durio zibethinus HOM05D006212 ORTHO05D008245 2.9e-86 322.8 281 58.0
CiPaw.01G266400 Carya illinoinensis HOM05D006212 ORTHO05D008245 6.4e-86 321.6 229 63.8
Gohir.A05G289000 Gossypium hirsutum HOM05D006212 ORTHO05D008245 6.4e-86 321.6 219 68.9
FAN06G2367 Fragaria x ananassa HOM05D006212 ORTHO05D008245 1.4e-85 320.5 246 60.6
Cfa001784 Carpinus fangiana HOM05D006212 ORTHO05D008245 2.4e-85 319.7 237 62.4
FvH4_7g18370 Fragaria vesca HOM05D006212 ORTHO05D008245 3.2e-85 319.3 246 60.6
FAN10G1668 Fragaria x ananassa HOM05D006212 ORTHO05D008245 3.2e-85 319.3 236 62.7
Lsat_1_v5_gn_2_103740 Lactuca sativa HOM05D006212 ORTHO05D008245 3.2e-85 319.3 252 61.9
TAR369G0250 Trochodendron aralioides HOM05D006212 ORTHO05D008245 3.2e-85 319.3 245 62.9
GSVIVG01016183001 Vitis vinifera HOM05D006212 ORTHO05D008245 3.2e-85 319.3 247 61.1
FAN06G0602 Fragaria x ananassa HOM05D006212 ORTHO05D008245 4.2e-85 318.9 246 60.6
Actinidia35775 Actinidia chinensis HOM05D006212 ORTHO05D008245 9.3e-85 317.8 288 56.6
TWI38G1180 Tripterygium wilfordii HOM05D006212 ORTHO05D008245 9.3e-85 317.8 240 62.5
FAN01G0990 Fragaria x ananassa HOM05D006212 ORTHO05D008245 2.1e-84 316.6 285 54.4
FAN03G1155 Fragaria x ananassa HOM05D006212 ORTHO05D008245 2.7e-84 316.2 236 61.9
ECA238G3613 Erigeron canadensis HOM05D006212 ORTHO05D008245 3.5e-84 315.8 256 59.0
Manes.10G051700 Manihot esculenta HOM05D006212 ORTHO05D008245 3.5e-84 315.8 238 64.7
Ciclev10031035m.g Citrus clementina HOM05D006212 ORTHO05D008245 4.6e-84 315.5 212 68.9
FAN10G3474 Fragaria x ananassa HOM05D006212 ORTHO05D008245 7.9e-84 314.7 236 62.3
MSTRG.27497 Avicennia marina HOM05D006212 ORTHO05D008245 3.9e-83 312.4 265 57.7
RcHm_v2.0_Chr1g0362181 Rosa chinensis HOM05D006212 ORTHO05D008245 1.5e-82 310.5 239 59.8
Thhalv10012585m.g Eutrema salsugineum HOM05D006212 ORTHO05D008245 8.1e-81 304.7 284 54.9
MD01G1100100 Malus domestica HOM05D006212 ORTHO05D008245 1.1e-80 304.3 214 64.0
TPR.G37858 Trifolium pratense HOM05D006212 ORTHO05D008245 1.1e-80 304.3 282 56.7
Aa31LG11G5260 Aethionema arabicum HOM05D006212 ORTHO05D008245 1.4e-80 303.9 284 53.2
Hund19796 Selenicereus undatus HOM05D006212 ORTHO05D008245 6.9e-80 301.6 216 62.5
Aqoxy1G01105 Aquilegia oxysepala HOM05D006212 ORTHO05D008245 1.2e-79 300.8 250 56.4
ClCG05G021340 Citrullus lanatus HOM05D006212 ORTHO05D008245 1.2e-79 300.8 233 58.8
HanXRQChr14g0455751 Helianthus annuus HOM05D006212 ORTHO05D008245 1.5e-79 300.4 218 62.4
arahy.Tifrunner.gnm1.ann1.KY2C4A Arachis hypogaea HOM05D006212 ORTHO05D008245 2.0e-79 300.1 292 55.1
CARHR208930 Cardamine hirsuta HOM05D006212 ORTHO05D008245 2.6e-79 299.7 295 53.2
BolC9t59986H Brassica oleracea HOM05D006212 ORTHO05D008245 4.5e-79 298.9 287 52.6
DCAR_019069 Daucus carota HOM05D006212 ORTHO05D008245 4.5e-79 298.9 217 62.2
Sp6g38370 Schrenkiella parvula HOM05D006212 ORTHO05D008245 4.5e-79 298.9 284 52.8
arahy.Tifrunner.gnm1.ann1.MYE0E1 Arachis hypogaea HOM05D006212 ORTHO05D008245 1.3e-78 297.4 294 54.1
C09p72430 Brassica napus HOM05D006212 ORTHO05D008245 2.2e-78 296.6 287 51.9
CsaV3_5G035900 Cucumis sativus L. HOM05D006212 ORTHO05D008245 3.8e-78 295.8 222 59.5
Lj5g0009189 Lotus japonicus HOM05D006212 ORTHO05D008245 3.8e-78 295.8 219 63.0
Glyma.10G197000 Glycine max HOM05D006212 ORTHO05D008245 4.9e-78 295.4 223 62.3
AUR62029688 Chenopodium quinoa HOM05D006212 ORTHO05D008245 1.1e-77 294.3 255 55.7
BcaC06g32141 Brassica carinata HOM05D006212 ORTHO05D008245 1.4e-77 293.9 286 52.4
Carub.0006s0331 Capsella rubella HOM05D006212 ORTHO05D008245 2.5e-77 293.1 278 54.0
AT5G04360 Arabidopsis thaliana HOM05D006212 ORTHO05D008245 3.2e-77 292.7 276 52.9
VMungo0720G1989 Vigna mungo HOM05D006212 ORTHO05D008245 3.2e-77 292.7 223 62.3
AUR62006360 Chenopodium quinoa HOM05D006212 ORTHO05D008245 4.2e-77 292.4 255 55.7
ATR0329G025 Amborella trichopoda HOM05D006212 ORTHO05D008245 1.2e-76 290.8 290 53.8
Lalb_Chr21g0312911 Lupinus albus HOM05D006212 ORTHO05D008245 1.6e-76 290.4 225 60.9
Phvul.007G139400 Phaseolus vulgaris HOM05D006212 ORTHO05D008245 1.6e-76 290.4 223 61.9
Atru.chr12.885 Acer truncatum HOM05D006212 ORTHO05D008245 2.1e-76 290.0 242 60.3
AL6G14000 Arabidopsis lyrata HOM05D006212 ORTHO05D008245 2.1e-76 290.0 276 53.3
Psat6g175360 Pisum sativum HOM05D006212 ORTHO05D008245 3.5e-76 289.3 260 56.2
Medtr1g090693 Medicago truncatula HOM05D006212 ORTHO05D008245 4.6e-76 288.9 291 53.3
SalBow4G3289 Salvia bowleyana HOM05D006212 ORTHO05D008245 1.3e-75 287.3 241 57.3
Sabra10G0177800 Salix brachista HOM05D006212 ORTHO05D008245 2.3e-75 286.6 288 51.7
THA.LOC104816441 Tarenaya hassleriana HOM05D006212 ORTHO05D008245 3.0e-75 286.2 245 56.3
Ah.08g209700 Amaranthus hybridus HOM05D006212 ORTHO05D008245 6.7e-75 285.0 216 59.7
A10p31730 Brassica napus HOM05D006212 ORTHO05D008245 8.7e-75 284.6 329 48.0
PSO339G2669 Papaver somniferum HOM05D006212 ORTHO05D008245 9.6e-74 281.2 235 55.7
MELO3C034031.2 Cucumis melo HOM05D006212 ORTHO05D008245 1.6e-73 280.4 310 49.4
Ca_10444_v3 Cicer arietinum L. HOM05D006212 ORTHO05D008245 3.7e-73 279.3 213 61.5
Migut.F01920 Erythranthe guttata HOM05D006212 ORTHO05D008245 6.3e-73 278.5 222 60.8
CDE02G0888 Ceratophyllum demersum HOM05D006212 ORTHO05D008245 1.5e-71 273.9 230 54.8
Zm00001eb088740 Zea mays HOM05D006212 ORTHO05D008245 2.8e-65 253.1 217 53.9
Sed0020526 Sechium edule HOM05D006212 ORTHO05D008245 1.8e-64 250.4 178 61.8
EL10Ac7g17062 Beta vulgaris HOM05D006212 ORTHO05D008245 1.0e-62 244.6 307 45.3
Dinv31247 Davidia involucrata HOM05D006212 ORTHO05D008245 1.0e-62 244.6 151 71.5
SEGI_29889 Sequoiadendron giganteum HOM05D006212 ORTHO05D008245 3.6e-60 236.1 210 51.9
SMO364G0199 Selaginella moellendorffii HOM05D006212 ORTHO05D008245 9.7e-58 228.0 216 47.7
AagrBONN_evm.TU.Sc2ySwM_368.1756 Anthoceros agrestis HOM05D006212 ORTHO05D008245 6.3e-57 225.3 225 46.2
Mapoly0043s0011 Marchantia polymorpha HOM05D006212 ORTHO05D008245 3.8e-54 216.1 226 46.0
Pp3c13_17460 Physcomitrium patens HOM05D006212 ORTHO05D008245 1.4e-53 214.2 225 44.0
Eucgr.G02746 Eucalyptus grandis HOM05D006212 ORTHO05D008245 6.7e-43 178.7 111 66.7
Sc06g0002110 Simmondsia chinensis HOM05D006212 ORTHO05D008245 9.8e-34 148.3 120 57.5
Cre11.g476650 Chlamydomonas reinhardtii HOM05D006212 ORTHO05D008245 1.4e-24 117.9 239 32.2
PRCOL_00002423 Prasinoderma coloniale HOM05D006212 ORTHO05D008245 2.4e-16 90.5 159 39.0
Actinidia18721 Actinidia chinensis HOM05D002639 ORTHO05D003094 3.0e-14 83.6 80 48.8
Ah.02g119250 Amaranthus hybridus HOM05D000462 ORTHO05D013926 2.0e-07 60.8 44 56.8


User provided reference genes

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