Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g008040.3 Solanum lycopersicum HOM05D006212 ORTHO05D008245 6.3e-111 404.1 196 100.0
Sopen11g003910 Solanum pennellii HOM05D006212 ORTHO05D008245 1.0e-108 396.7 196 96.9
CAN.G459.26 Capsicum annuum HOM05D006212 ORTHO05D008245 1.7e-103 379.4 197 92.4
Nitab4.5_0007723g0030 Nicotiana tabacum HOM05D006212 ORTHO05D008245 1.8e-102 375.9 197 92.4
GSVIVG01016183001 Vitis vinifera HOM05D006212 ORTHO05D008245 4.8e-95 351.3 196 83.2
Dinv31247 Davidia involucrata HOM05D006212 ORTHO05D008245 4.1e-94 348.2 196 82.1
QL08p053276 Quercus lobata HOM05D006212 ORTHO05D008245 1.3e-92 343.2 196 82.1
Nitab4.5_0004987g0060 Nicotiana tabacum HOM05D006212 ORTHO05D008245 1.7e-92 342.8 180 91.7
Thecc.10G087900 Theobroma cacao HOM05D006212 ORTHO05D008245 1.9e-91 339.3 196 78.6
MD01G1100100 Malus domestica HOM05D006212 ORTHO05D008245 2.5e-91 339.0 196 80.6
TAR369G0250 Trochodendron aralioides HOM05D006212 ORTHO05D008245 3.3e-91 338.6 196 81.1
Prupe.2G205800 Prunus persica HOM05D006212 ORTHO05D008245 7.2e-91 337.4 196 80.1
CSS0046021 Camellia sinensis var. sinensis HOM05D006212 ORTHO05D008245 9.5e-91 337.0 196 80.1
Lj2A23T70 Lonicera japonica HOM05D006212 ORTHO05D008245 1.6e-90 336.3 196 81.1
COL.COLO4_09860 Corchorus olitorius HOM05D006212 ORTHO05D008245 6.1e-90 334.3 196 78.1
DCAR_019069 Daucus carota HOM05D006212 ORTHO05D008245 6.1e-90 334.3 196 80.6
Duzib114G0641 Durio zibethinus HOM05D006212 ORTHO05D008245 1.0e-89 333.6 196 78.6
TWI38G1180 Tripterygium wilfordii HOM05D006212 ORTHO05D008245 2.3e-89 332.4 196 78.1
MSTRG.27497 Avicennia marina HOM05D006212 ORTHO05D008245 5.2e-89 331.3 196 78.6
Cfa001784 Carpinus fangiana HOM05D006212 ORTHO05D008245 5.2e-89 331.3 196 79.1
Gorai.009G305300 Gossypium raimondii HOM05D006212 ORTHO05D008245 5.2e-89 331.3 196 77.6
Haze_16761 Corylus avellana HOM05D006212 ORTHO05D008245 2.0e-88 329.3 196 78.6
Potri.010G229300 Populus trichocarpa HOM05D006212 ORTHO05D008245 2.0e-88 329.3 197 75.6
RcHm_v2.0_Chr1g0362181 Rosa chinensis HOM05D006212 ORTHO05D008245 4.4e-88 328.2 196 77.6
Sed0020526 Sechium edule HOM05D006212 ORTHO05D008245 7.5e-88 327.4 196 78.6
Cc02_g10690 Coffea canephora HOM05D006212 ORTHO05D008245 1.7e-87 326.2 196 75.5
vmacro10255 Vaccinium macrocarpon HOM05D006212 ORTHO05D008245 1.7e-87 326.2 196 77.0
FvH4_7g18370 Fragaria vesca HOM05D006212 ORTHO05D008245 2.2e-87 325.9 196 77.6
FAN06G0602 Fragaria x ananassa HOM05D006212 ORTHO05D008245 2.2e-87 325.9 196 77.6
Eucgr.G02746 Eucalyptus grandis HOM05D006212 ORTHO05D008245 2.8e-87 325.5 196 77.0
ClCG05G021340 Citrullus lanatus HOM05D006212 ORTHO05D008245 3.7e-87 325.1 196 79.1
HanXRQChr14g0455751 Helianthus annuus HOM05D006212 ORTHO05D008245 3.7e-87 325.1 196 77.6
Hund19796 Selenicereus undatus HOM05D006212 ORTHO05D008245 4.9e-87 324.7 195 77.9
FAN06G2367 Fragaria x ananassa HOM05D006212 ORTHO05D008245 1.1e-86 323.6 196 77.0
Nn6g35226 Nelumbo nucifera HOM05D006212 ORTHO05D008245 1.4e-86 323.2 196 77.6
Hma1.2p1_0117F.1_g056390 Hydrangea macrophylla HOM05D006212 ORTHO05D008245 4.1e-86 321.6 196 74.5
Oeu016301.1 Olea europaea HOM05D006212 ORTHO05D008245 4.1e-86 321.6 196 76.0
FAN10G1668 Fragaria x ananassa HOM05D006212 ORTHO05D008245 9.2e-86 320.5 194 77.3
CsaV3_5G035900 Cucumis sativus L. HOM05D006212 ORTHO05D008245 1.6e-85 319.7 196 78.1
Migut.F01920 Erythranthe guttata HOM05D006212 ORTHO05D008245 2.0e-85 319.3 196 76.0
Glyma.10G197000 Glycine max HOM05D006212 ORTHO05D008245 2.0e-85 319.3 196 75.0
SalBow4G3289 Salvia bowleyana HOM05D006212 ORTHO05D008245 2.0e-85 319.3 196 75.0
CiPaw.01G266400 Carya illinoinensis HOM05D006212 ORTHO05D008245 3.5e-85 318.5 196 78.1
FAN03G1155 Fragaria x ananassa HOM05D006212 ORTHO05D008245 5.9e-85 317.8 196 76.5
Lsat_1_v5_gn_2_103740 Lactuca sativa HOM05D006212 ORTHO05D008245 1.0e-84 317.0 196 74.5
ECA238G3613 Erigeron canadensis HOM05D006212 ORTHO05D008245 1.3e-84 316.6 196 75.5
Sc06g0002110 Simmondsia chinensis HOM05D006212 ORTHO05D008245 2.3e-84 315.8 196 74.5
VMungo0720G1989 Vigna mungo HOM05D006212 ORTHO05D008245 2.9e-84 315.5 196 74.5
Phvul.007G139400 Phaseolus vulgaris HOM05D006212 ORTHO05D008245 5.0e-84 314.7 196 73.0
Sabra10G0177800 Salix brachista HOM05D006212 ORTHO05D008245 5.0e-84 314.7 215 68.8
Rhsim09G0146100 Rhododendron simsii HOM05D006212 ORTHO05D008245 8.6e-84 313.9 227 67.4
SGA_v2.0_scaffold13G06519 Striga asiatica HOM05D006212 ORTHO05D008245 8.6e-84 313.9 196 74.0
arahy.Tifrunner.gnm1.ann1.MYE0E1 Arachis hypogaea HOM05D006212 ORTHO05D008245 1.5e-83 313.2 196 74.5
Lalb_Chr21g0312911 Lupinus albus HOM05D006212 ORTHO05D008245 5.6e-83 311.2 196 73.5
Cpa.g.sc53.158 Carica papaya HOM05D006212 ORTHO05D008245 7.3e-83 310.8 196 75.5
Ca_10444_v3 Cicer arietinum L. HOM05D006212 ORTHO05D008245 9.5e-83 310.5 196 73.0
Psat6g172720 Pisum sativum HOM05D006212 ORTHO05D008245 5.2e-81 304.7 196 70.9
TPR.G37858 Trifolium pratense HOM05D006212 ORTHO05D008245 5.2e-81 304.7 196 70.9
THA.LOC104816441 Tarenaya hassleriana HOM05D006212 ORTHO05D008245 6.8e-81 304.3 196 70.9
CARHR208930 Cardamine hirsuta HOM05D006212 ORTHO05D008245 1.2e-80 303.5 196 74.0
PSO339G2669 Papaver somniferum HOM05D006212 ORTHO05D008245 1.2e-80 303.5 196 74.0
arahy.Tifrunner.gnm1.ann1.KY2C4A Arachis hypogaea HOM05D006212 ORTHO05D008245 2.0e-80 302.8 196 70.9
AT5G04360 Arabidopsis thaliana HOM05D006212 ORTHO05D008245 1.7e-79 299.7 196 73.5
Medtr1g090693 Medicago truncatula HOM05D006212 ORTHO05D008245 2.2e-79 299.3 196 70.4
FAN01G0990 Fragaria x ananassa HOM05D006212 ORTHO05D008245 6.4e-79 297.7 196 72.4
AL6G14000 Arabidopsis lyrata HOM05D006212 ORTHO05D008245 8.3e-79 297.4 196 71.9
Aa31LG11G5260 Aethionema arabicum HOM05D006212 ORTHO05D008245 2.4e-78 295.8 196 72.4
AUR62029688 Chenopodium quinoa HOM05D006212 ORTHO05D008245 7.0e-78 294.3 196 69.9
Sp6g38370 Schrenkiella parvula HOM05D006212 ORTHO05D008245 7.0e-78 294.3 196 73.0
A10p31720 Brassica napus HOM05D006212 ORTHO05D008245 2.7e-77 292.4 194 70.6
Thhalv10012585m.g Eutrema salsugineum HOM05D006212 ORTHO05D008245 3.5e-77 292.0 196 70.4
Carub.0006s0331 Capsella rubella HOM05D006212 ORTHO05D008245 1.0e-76 290.4 196 70.9
AUR62006360 Chenopodium quinoa HOM05D006212 ORTHO05D008245 1.7e-76 289.7 196 69.4
BraA10t45218Z Brassica rapa HOM05D006212 ORTHO05D008245 1.9e-75 286.2 191 70.2
ATR0329G025 Amborella trichopoda HOM05D006212 ORTHO05D008245 2.5e-75 285.8 197 70.1
A05p23200 Brassica napus HOM05D006212 ORTHO05D008245 2.5e-75 285.8 194 69.1
BraA05t21187Z Brassica rapa HOM05D006212 ORTHO05D008245 2.5e-75 285.8 194 69.1
Peaxi162Scf00982g00214 Petunia axillaris HOM05D006212 ORTHO05D008245 4.3e-75 285.0 151 90.7
C09p72420 Brassica napus HOM05D006212 ORTHO05D008245 1.2e-74 283.5 194 68.6
EL10Ac7g17062 Beta vulgaris HOM05D006212 ORTHO05D008245 6.6e-68 261.2 195 63.1
BcaC06g32141 Brassica carinata HOM05D006212 ORTHO05D008245 6.6e-68 261.2 167 71.9
Mapoly0043s0011 Marchantia polymorpha HOM05D006212 ORTHO05D008245 5.6e-67 258.1 197 62.9
Os04g0164900 Oryza sativa ssp. japonica HOM05D006212 ORTHO05D008245 6.2e-66 254.6 196 59.2
MELO3C034031.2 Cucumis melo HOM05D006212 ORTHO05D008245 3.1e-65 252.3 224 59.8
Zm00001eb088740 Zea mays HOM05D006212 ORTHO05D008245 8.3e-63 244.2 196 57.7
Gohir.D05G290200 Gossypium hirsutum HOM05D006212 ORTHO05D008245 1.4e-62 243.4 129 85.3
Pp3c13_17460 Physcomitrium patens HOM05D006212 ORTHO05D008245 1.9e-62 243.0 197 57.9
SMO364G0199 Selaginella moellendorffii HOM05D006212 ORTHO05D008245 9.2e-62 240.7 196 61.2
SEGI_14076 Sequoiadendron giganteum HOM05D006212 ORTHO05D008245 6.0e-61 238.0 177 65.0
FAN10G3474 Fragaria x ananassa HOM05D006212 ORTHO05D008245 5.1e-60 235.0 196 60.7
Lj5g0009189 Lotus japonicus HOM05D006212 ORTHO05D008245 6.6e-60 234.6 130 81.5
Ah.08g209700 Amaranthus hybridus HOM05D006212 ORTHO05D008245 3.8e-55 218.8 150 69.3
Actinidia35775 Actinidia chinensis HOM05D006212 ORTHO05D008245 1.4e-54 216.9 171 66.1
Aqoxy1G01105 Aquilegia oxysepala HOM05D006212 ORTHO05D008245 3.6e-42 175.6 95 84.2
MD07G1166900 Malus domestica HOM05D006212 ORTHO05D008245 4.8e-34 148.7 199 46.7
Gohir.A05G289000 Gossypium hirsutum HOM05D006212 ORTHO05D008245 5.3e-33 145.2 77 83.1
Atru.chr12.885 Acer truncatum HOM05D006212 ORTHO05D008245 6.0e-29 131.7 81 75.3
Cre11.g476650 Chlamydomonas reinhardtii HOM05D006212 ORTHO05D008245 8.7e-28 127.9 211 37.9
PRCOL_00002423 Prasinoderma coloniale HOM05D006212 ORTHO05D008245 8.2e-26 121.3 204 40.2
ECA238G4402 Erigeron canadensis HOM05D000006 ORTHO05D000013 3.3e-11 72.8 78 47.4
Phvul.005G014100 Phaseolus vulgaris HOM05D006212 ORTHO05D008245 5.9e-08 62.0 38 65.8


User provided reference genes

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