Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g007870.1 Solanum lycopersicum HOM05D021137 ORTHO05D004438 2.2e-51 205.3 100 100.0
Sopen11g003730 Solanum pennellii HOM05D021137 ORTHO05D004438 1.6e-49 199.1 100 97.0
PGSC0003DMG400027332 Solanum tuberosum HOM05D021137 ORTHO05D004438 3.1e-37 158.3 100 80.0
Solyc11g007880.1 Solanum lycopersicum HOM05D021137 ORTHO05D004438 4.0e-37 157.9 100 79.0
Sopen11g003740 Solanum pennellii HOM05D021137 ORTHO05D004438 1.5e-36 156.0 100 80.0
CAN.G135.30 Capsicum annuum HOM05D021137 ORTHO05D004438 2.2e-19 99.0 101 57.4
PGSC0003DMG400027330 Solanum tuberosum HOM05D005304 ORTHO05D004438 6.0e-09 64.3 92 45.7
Sopen11g003720 Solanum pennellii HOM05D005304 ORTHO05D004438 1.3e-08 63.2 93 44.1
Solyc11g007860.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 3.0e-08 62.0 93 43.0
Nitab4.5_0000593g0370 Nicotiana tabacum HOM05D005304 ORTHO05D004438 7.4e-07 57.4 110 35.5
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 9.6e-07 57.0 97 38.1
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 1.6e-06 56.2 117 34.2
CsaV3_2G032750 Cucumis sativus L. HOM05D005304 ORTHO05D004438 2.8e-06 55.5 104 36.5
ClCG08G007940 Citrullus lanatus HOM05D005304 ORTHO05D004438 3.7e-06 55.1 71 43.7
RcHm_v2.0_Chr1g0336411 Rosa chinensis HOM05D005304 ORTHO05D004438 3.7e-06 55.1 76 39.5
Cc02_g10500 Coffea canephora HOM05D005304 ORTHO05D004438 4.8e-06 54.7 69 46.4
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 4.8e-06 54.7 62 41.9
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 4.8e-06 54.7 95 37.9
Oeu032435.1 Olea europaea HOM05D005304 ORTHO05D004438 6.2e-06 54.3 81 43.2
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 6.2e-06 54.3 57 50.9
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 6.2e-06 54.3 78 41.0
FAN01G2164 Fragaria x ananassa HOM05D005304 ORTHO05D004438 8.2e-06 53.9 77 39.0
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 8.2e-06 53.9 77 39.0
Solyc03g071710.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 8.2e-06 53.9 112 34.8
Sopen03g019970 Solanum pennellii HOM05D005304 ORTHO05D004438 8.2e-06 53.9 112 34.8
PGSC0003DMG400023483 Solanum tuberosum HOM05D005304 ORTHO05D004438 8.2e-06 53.9 109 35.8


User provided reference genes

Program Settings