Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g007860.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 2.5e-50 201.8 105 100.0
Sopen11g003720 Solanum pennellii HOM05D005304 ORTHO05D004438 1.8e-48 195.7 105 95.2
PGSC0003DMG400027330 Solanum tuberosum HOM05D005304 ORTHO05D004438 1.9e-45 185.7 107 92.5
CAN.G135.30 Capsicum annuum HOM05D021137 ORTHO05D004438 4.0e-19 98.2 105 52.4
Nitab4.5_0000593g0370 Nicotiana tabacum HOM05D005304 ORTHO05D004438 9.8e-18 93.6 102 56.9
Oeu032435.1 Olea europaea HOM05D005304 ORTHO05D004438 1.3e-14 83.2 109 48.6
Oeu059829.1 Olea europaea HOM05D005304 ORTHO05D004438 3.2e-13 78.6 102 51.0
Rhsim03G0110900 Rhododendron simsii HOM05D005304 ORTHO05D004438 4.7e-12 74.7 96 50.0
PGSC0003DMG400023483 Solanum tuberosum HOM05D005304 ORTHO05D004438 8.0e-12 73.9 114 44.7
Solyc11g007880.1 Solanum lycopersicum HOM05D021137 ORTHO05D004438 1.4e-11 73.2 97 45.4
Nitab4.5_0000107g0230 Nicotiana tabacum HOM05D005304 ORTHO05D004438 3.0e-11 72.0 100 48.0
Sopen11g003740 Solanum pennellii HOM05D021137 ORTHO05D004438 4.0e-11 71.6 97 45.4
Manes.07G093500 Manihot esculenta HOM05D005304 ORTHO05D004438 5.2e-11 71.2 99 46.5
CAN.G612.11 Capsicum annuum HOM05D005304 ORTHO05D004438 8.8e-11 70.5 119 45.4
Manes.10G053200 Manihot esculenta HOM05D005304 ORTHO05D004438 8.8e-11 70.5 114 43.0
Cc02_g10500 Coffea canephora HOM05D005304 ORTHO05D004438 1.2e-10 70.1 112 42.9
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 1.5e-10 69.7 94 44.7
Solyc03g071710.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 1.5e-10 69.7 102 45.1
Sopen03g019970 Solanum pennellii HOM05D005304 ORTHO05D004438 1.5e-10 69.7 102 45.1
Sopen05g033870 Solanum pennellii HOM05D005304 ORTHO05D004438 5.7e-10 67.8 110 42.7
TWI63G0695 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 7.5e-10 67.4 101 42.6
Duzib114G0655 Durio zibethinus HOM05D005304 ORTHO05D004438 1.7e-09 66.2 94 44.7
Gohir.A05G290700 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.2e-09 65.9 114 44.7
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 2.2e-09 65.9 100 45.0
PGSC0003DMG400027332 Solanum tuberosum HOM05D021137 ORTHO05D004438 2.2e-09 65.9 97 43.3
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 3.7e-09 65.1 101 43.6
CsaV3_2G032750 Cucumis sativus L. HOM05D005304 ORTHO05D004438 3.7e-09 65.1 101 43.6
Gorai.009G307700 Gossypium raimondii HOM05D005304 ORTHO05D004438 4.9e-09 64.7 114 43.0
PGSC0003DMG400016914 Solanum tuberosum HOM05D005304 ORTHO05D004438 4.9e-09 64.7 106 43.4
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 6.3e-09 64.3 97 44.3
Duzib128G0830 Durio zibethinus HOM05D005304 ORTHO05D004438 6.3e-09 64.3 107 41.1
Gohir.D05G291900 Gossypium hirsutum HOM05D005304 ORTHO05D004438 8.3e-09 63.9 114 43.0
ClCG08G007940 Citrullus lanatus HOM05D005304 ORTHO05D004438 1.1e-08 63.5 106 41.5
Gohir.A01G128800 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.1e-08 63.5 98 43.9
Thecc.10G090600 Theobroma cacao HOM05D005304 ORTHO05D004438 1.1e-08 63.5 99 44.4
Cfa001771 Carpinus fangiana HOM05D005304 ORTHO05D004438 1.4e-08 63.2 69 53.6
Gohir.D01G118400 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.8e-08 62.8 98 43.9
Gorai.002G144400 Gossypium raimondii HOM05D005304 ORTHO05D004438 1.8e-08 62.8 98 43.9
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 3.1e-08 62.0 103 43.7
Duzib128G0918 Durio zibethinus HOM05D005304 ORTHO05D004438 3.1e-08 62.0 111 41.4
Sopen11g003730 Solanum pennellii HOM05D021137 ORTHO05D004438 3.1e-08 62.0 93 43.0
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 4.1e-08 61.6 106 39.6
Haze_16785 Corylus avellana HOM05D005304 ORTHO05D004438 5.4e-08 61.2 69 52.2
QL03p021677 Quercus lobata HOM05D005304 ORTHO05D004438 5.4e-08 61.2 124 37.9
Sabra10G0179600 Salix brachista HOM05D005304 ORTHO05D004438 5.4e-08 61.2 101 41.6
CiPaw.01G264700 Carya illinoinensis HOM05D005304 ORTHO05D004438 7.0e-08 60.8 119 38.7
COL.COLO4_32872 Corchorus olitorius HOM05D005304 ORTHO05D004438 7.0e-08 60.8 111 37.8
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 7.0e-08 60.8 101 41.6
Manes.10G053300 Manihot esculenta HOM05D005304 ORTHO05D004438 9.2e-08 60.5 111 38.7
SalBow4G2705 Salvia bowleyana HOM05D005304 ORTHO05D004438 9.2e-08 60.5 95 38.9
Solyc11g007870.1 Solanum lycopersicum HOM05D021137 ORTHO05D004438 1.2e-07 60.1 93 43.0
TAR636G3524 Trochodendron aralioides HOM05D005304 ORTHO05D004438 1.2e-07 60.1 99 41.4
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.6e-07 59.7 102 43.1
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.0e-07 59.3 100 39.0
Lsat_1_v5_gn_8_22700 Lactuca sativa HOM05D005304 ORTHO05D004438 2.7e-07 58.9 70 50.0
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 2.7e-07 58.9 92 44.6
FvH4_7g06790 Fragaria vesca HOM05D005304 ORTHO05D004438 3.5e-07 58.5 100 38.0
FAN06G1004 Fragaria x ananassa HOM05D005304 ORTHO05D004438 3.5e-07 58.5 100 38.0
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 3.5e-07 58.5 102 37.3
FAN10G3090 Fragaria x ananassa HOM05D005304 ORTHO05D004438 3.5e-07 58.5 100 38.0
RcHm_v2.0_Chr1g0336411 Rosa chinensis HOM05D005304 ORTHO05D004438 3.5e-07 58.5 62 48.4
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 5.9e-07 57.8 67 49.3
CiPaw.02G169800 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.0e-06 57.0 115 36.5
QL03p011649 Quercus lobata HOM05D005304 ORTHO05D004438 1.0e-06 57.0 124 37.1
Actinidia06715 Actinidia chinensis HOM05D005304 ORTHO05D004438 1.3e-06 56.6 85 44.7
FAN12G4274 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.3e-06 56.6 100 38.0
TWI38G0392 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 1.3e-06 56.6 105 40.0
Ciclev10033091m.g Citrus clementina HOM05D005304 ORTHO05D004438 2.3e-06 55.8 107 42.1
DCAR_019059 Daucus carota HOM05D005304 ORTHO05D004438 2.3e-06 55.8 91 39.6
Gohir.A05G393600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.3e-06 55.8 60 51.7
Gohir.D04G021300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.3e-06 55.8 60 51.7
Gorai.012G025400 Gossypium raimondii HOM05D005304 ORTHO05D004438 2.3e-06 55.8 60 51.7
Prupe.2G095100 Prunus persica HOM05D005304 ORTHO05D004438 2.3e-06 55.8 96 40.6
SalBow6G1975 Salvia bowleyana HOM05D005304 ORTHO05D004438 2.3e-06 55.8 112 36.6
FAN01G2164 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.9e-06 55.5 100 38.0
Eucgr.J01033 Eucalyptus grandis HOM05D005304 ORTHO05D004438 5.0e-06 54.7 57 47.4
FAN02G4580 Fragaria x ananassa HOM05D005304 ORTHO05D004438 5.0e-06 54.7 100 37.0
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 5.0e-06 54.7 96 44.8
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 5.0e-06 54.7 98 40.8
CANSAT56G0274 Cannabis sativa HOM05D005304 ORTHO05D004438 8.6e-06 53.9 58 46.6


User provided reference genes

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