Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 5.0e-210 734.2 368 100.0
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 3.7e-205 718.0 363 98.3
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 7.2e-201 703.7 363 96.4
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 1.1e-177 626.7 359 87.5
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 9.5e-177 623.6 365 86.6
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 2.8e-176 622.1 369 85.6
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 2.1e-131 473.0 373 67.6
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 5.8e-126 454.9 367 64.3
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 1.7e-125 453.4 367 64.6
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 2.5e-124 449.5 367 64.0
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 2.3e-122 443.0 374 60.4
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 3.9e-122 442.2 383 61.1
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 3.9e-122 442.2 370 63.5
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 1.1e-121 440.7 372 62.1
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.5e-121 440.3 368 60.9
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 1.9e-121 439.9 368 60.9
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 3.3e-121 439.1 364 64.3
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 4.3e-121 438.7 355 63.7
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 5.7e-121 438.3 362 63.8
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 9.7e-121 437.6 384 62.2
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 2.8e-120 436.0 375 61.3
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 2.4e-119 433.0 371 61.2
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 4.1e-119 432.2 371 60.9
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 4.1e-119 432.2 366 62.6
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.3e-117 427.2 375 61.1
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 1.3e-117 427.2 371 63.1
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 1.7e-117 426.8 368 60.6
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 3.8e-117 425.6 375 60.8
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 3.8e-117 425.6 368 59.8
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 5.0e-117 425.2 373 60.3
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 8.5e-117 424.5 381 60.9
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 1.1e-116 424.1 366 62.0
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 1.1e-116 424.1 360 61.1
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.1e-116 424.1 374 62.6
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 2.5e-116 422.9 374 58.0
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 4.2e-116 422.2 361 61.8
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 1.0e-114 417.5 370 60.3
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 3.0e-114 416.0 353 62.3
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 3.9e-114 415.6 398 56.0
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 8.8e-114 414.5 384 57.6
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 1.1e-113 414.1 368 56.5
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 1.5e-113 413.7 361 62.6
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 1.9e-113 413.3 366 58.7
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 3.3e-113 412.5 370 58.6
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 3.3e-113 412.5 355 60.3
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 5.7e-113 411.8 351 59.8
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 2.2e-112 409.8 371 58.0
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 3.7e-112 409.1 375 58.7
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 1.4e-111 407.1 438 53.2
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 2.4e-111 406.4 387 58.1
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 5.3e-111 405.2 365 58.6
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 1.5e-110 403.7 374 56.7
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 5.9e-110 401.7 378 56.9
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 5.9e-110 401.7 331 61.9
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.0e-109 401.0 365 56.7
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 2.2e-109 399.8 376 57.7
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 2.5e-108 396.4 355 57.2
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 5.5e-108 395.2 345 60.6
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 7.2e-108 394.8 324 63.6
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 1.6e-107 393.7 337 58.8
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 2.7e-107 392.9 365 57.8
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 4.7e-107 392.1 336 58.9
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 4.7e-107 392.1 325 60.9
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 1.0e-106 391.0 387 57.4
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 3.0e-106 389.4 352 58.0
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 6.7e-106 388.3 357 57.4
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 6.7e-106 388.3 373 57.1
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.5e-105 387.1 369 55.3
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 3.3e-105 386.0 371 55.0
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 5.7e-105 385.2 369 56.4
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 7.4e-105 384.8 357 57.1
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 7.4e-105 384.8 359 57.1
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 9.7e-105 384.4 352 57.1
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 1.7e-104 383.6 352 57.7
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 2.8e-104 382.9 357 56.0
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 4.8e-104 382.1 339 58.1
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 4.8e-104 382.1 352 57.1
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 6.3e-104 381.7 323 60.7
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 1.1e-103 380.9 339 57.8
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 1.8e-103 380.2 371 56.1
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 1.8e-103 380.2 339 57.8
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 1.2e-102 377.5 354 57.1
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 2.9e-101 372.9 343 56.3
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 3.8e-101 372.5 287 64.1
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 1.6e-99 367.1 289 63.7
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.3e-98 363.2 274 67.5
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 2.4e-95 353.2 337 58.2
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 5.9e-94 348.6 375 54.7
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 7.7e-94 348.2 275 62.9
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 2.9e-93 346.3 370 54.9
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 3.0e-90 336.3 263 63.1
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 7.5e-89 331.6 242 69.0
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 5.3e-87 325.5 395 46.8
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.2e-86 324.3 339 52.5
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 4.5e-86 322.4 341 51.9
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 1.3e-85 320.9 235 68.5
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 3.2e-84 316.2 315 53.3
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 1.2e-83 314.3 280 55.0
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.1e-83 313.5 258 64.7
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 3.6e-83 312.8 334 50.9
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 4.7e-83 312.4 181 79.0
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 2.0e-78 297.0 167 80.8
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 2.9e-77 293.1 359 49.0
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 4.0e-74 282.7 320 46.9
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 6.8e-74 282.0 300 54.7
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 4.9e-72 275.8 279 52.0
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 2.7e-54 216.9 227 50.7
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 3.4e-49 199.9 204 55.4
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.2e-43 181.4 113 69.9
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 6.8e-42 175.6 244 41.4
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 2.7e-38 163.7 203 46.3
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.6e-35 154.5 140 55.7
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 6.2e-35 152.5 197 43.7
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 2.2e-32 144.1 183 45.9
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 3.4e-25 120.2 71 80.3
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 5.6e-12 76.3 100 48.0
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 7.4e-12 75.9 63 55.6
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 3.1e-10 70.5 78 44.9
Nn2g16007 Nelumbo nucifera HOM05D006491 ORTHO05D008412 2.1e-06 57.8 63 55.6
Medtr4g025750 Medicago truncatula HOM05D006491 ORTHO05D008317 2.7e-06 57.4 70 45.7


User provided reference genes

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