Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 1.3e-128 463.0 226 100.0
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 1.2e-124 449.9 226 97.3
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 1.7e-120 436.0 217 97.2
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 4.1e-114 414.8 226 87.2
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.7e-112 409.5 226 87.2
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 2.8e-110 402.1 226 85.4
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 5.1e-96 354.8 210 75.2
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 4.3e-95 351.7 210 74.3
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.6e-94 349.7 217 74.7
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 2.3e-93 345.9 226 71.7
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 2.3e-93 345.9 222 71.2
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 3.1e-93 345.5 209 73.2
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 6.8e-93 344.4 217 72.8
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 5.8e-92 341.3 225 68.9
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 9.9e-92 340.5 222 69.4
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 1.7e-91 339.7 225 70.7
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 2.9e-91 339.0 213 72.3
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 6.4e-91 337.8 223 69.1
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 1.1e-90 337.0 224 68.8
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 1.1e-90 337.0 227 70.0
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.9e-90 336.3 216 72.2
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 1.9e-90 336.3 178 90.4
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 3.2e-90 335.5 214 72.4
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 4.1e-90 335.1 212 74.1
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 5.4e-90 334.7 226 69.9
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 7.1e-90 334.3 221 69.2
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 9.2e-90 334.0 221 68.8
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 9.2e-90 334.0 225 65.3
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 1.2e-89 333.6 221 71.0
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 2.7e-89 332.4 224 68.8
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 6.0e-89 331.3 221 68.3
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 1.3e-88 330.1 221 66.1
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 1.7e-88 329.7 216 68.1
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 2.3e-88 329.3 216 69.0
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 3.9e-88 328.6 219 68.9
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 3.9e-88 328.6 203 74.4
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 1.1e-87 327.0 214 70.1
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 1.9e-87 326.2 216 67.1
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 3.3e-87 325.5 222 68.0
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 9.6e-87 323.9 215 68.8
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 9.6e-87 323.9 221 64.7
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 1.2e-86 323.6 232 67.2
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 3.6e-86 322.0 221 65.2
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 4.7e-86 321.6 210 69.0
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 8.1e-86 320.9 217 71.0
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 1.1e-85 320.5 216 66.2
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 1.8e-85 319.7 225 67.1
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 2.4e-85 319.3 215 67.9
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 4.0e-85 318.5 223 65.0
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 1.5e-84 316.6 221 67.4
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 5.8e-84 314.7 224 62.9
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 5.8e-84 314.7 216 69.0
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 7.6e-84 314.3 181 78.5
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 7.6e-84 314.3 221 64.3
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 9.9e-84 313.9 217 63.6
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 2.2e-83 312.8 214 68.2
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 1.1e-82 310.5 222 62.6
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 2.4e-82 309.3 223 63.7
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 4.2e-82 308.5 224 62.5
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 5.4e-82 308.1 217 64.5
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 7.1e-82 307.8 223 65.0
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 9.3e-82 307.4 223 65.0
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 1.2e-81 307.0 216 65.3
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 1.6e-81 306.6 220 63.6
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 2.7e-81 305.8 213 65.7
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 4.6e-81 305.1 217 63.1
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 4.6e-81 305.1 223 64.1
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 4.6e-81 305.1 276 53.6
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 7.8e-81 304.3 223 63.7
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 7.8e-81 304.3 223 63.7
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 7.8e-81 304.3 223 63.7
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 1.3e-80 303.5 223 63.2
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 1.7e-80 303.1 214 64.5
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 1.7e-80 303.1 217 64.5
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 3.0e-80 302.4 214 64.5
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 6.6e-80 301.2 214 63.6
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 1.5e-79 300.1 217 64.1
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 2.5e-79 299.3 219 62.1
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 3.3e-79 298.9 222 62.2
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 7.3e-79 297.7 214 63.1
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 7.3e-79 297.7 212 63.7
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 2.8e-78 295.8 205 66.3
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 6.9e-77 291.2 213 60.6
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 1.2e-76 290.4 216 60.6
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 4.4e-76 288.5 209 63.2
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 1.1e-74 283.9 210 62.9
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 3.2e-74 282.3 209 63.2
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 2.7e-73 279.3 209 61.2
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 1.3e-72 276.9 223 59.6
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 1.1e-71 273.9 221 57.5
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 1.5e-71 273.5 207 59.9
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 4.3e-71 271.9 209 58.4
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 1.6e-70 270.0 213 58.2
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 8.1e-70 267.7 213 56.8
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 2.6e-68 262.7 181 67.4
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 1.3e-67 260.4 176 67.6
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 1.3e-67 260.4 224 55.4
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 4.2e-66 255.4 175 66.9
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 4.2e-66 255.4 215 56.7
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 2.5e-63 246.1 244 48.8
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 4.3e-63 245.4 157 73.2
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 2.8e-62 242.7 223 50.7
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 6.2e-62 241.5 224 50.0
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 1.1e-61 240.7 175 61.7
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 1.4e-61 240.4 215 53.5
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.1e-57 226.5 215 50.7
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 1.0e-56 224.2 213 49.8
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 2.8e-54 216.1 213 47.9
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 3.7e-54 215.7 159 61.0
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 6.9e-53 211.5 164 62.2
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 3.4e-52 209.1 213 44.1
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 1.7e-51 206.8 211 47.4
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 3.8e-51 205.7 177 57.6
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 1.5e-47 193.7 213 44.1
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 1.3e-46 190.7 136 61.8
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 8.5e-43 177.9 161 52.2
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 9.4e-42 174.5 113 69.9
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 9.7e-31 137.9 130 53.1
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 1.2e-28 131.0 82 72.0
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 5.0e-27 125.6 223 30.0
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 9.7e-23 111.3 127 43.3
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 4.8e-22 109.0 221 33.0
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 1.8e-13 80.5 56 62.5
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 2.4e-13 80.1 97 47.4
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 4.1e-13 79.3 80 55.0
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 1.2e-12 77.8 44 70.5
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 6.5e-11 72.0 115 34.8


User provided reference genes

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