Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g007520.1 Solanum lycopersicum HOM05D009634 ORTHO05D009650 1.1e-73 280.0 154 100.0
Sopen11g003360 Solanum pennellii HOM05D009634 ORTHO05D009650 3.6e-69 265.0 152 94.7
PGSC0003DMG400027311 Solanum tuberosum HOM05D009634 ORTHO05D009650 6.6e-63 244.2 160 87.5
PGSC0003DMG400027312 Solanum tuberosum HOM05D009634 ORTHO05D009650 1.3e-55 219.9 131 86.3
CAN.G135.81 Capsicum annuum HOM05D009634 ORTHO05D009650 2.2e-50 202.6 153 77.1
Nitab4.5_0001850g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.3e-42 176.8 160 68.1
Peaxi162Scf00244g00074 Petunia axillaris HOM05D009634 ORTHO05D009650 4.6e-40 168.3 141 69.5
Nitab4.5_0002878g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 6.0e-40 167.9 166 67.5
Peaxi162Scf00244g00075 Petunia axillaris HOM05D009634 ORTHO05D009650 3.5e-16 89.0 118 44.1
Nitab4.5_0002878g0060 Nicotiana tabacum HOM05D009634 ORTHO05D009650 3.9e-15 85.5 105 49.5
Nitab4.5_0002878g0050 Nicotiana tabacum HOM05D009634 ORTHO05D009650 5.1e-15 85.1 121 41.3
Oeu026565.1 Olea europaea HOM05D009634 ORTHO05D009650 6.6e-15 84.7 111 45.0
SalBow6G4194 Salvia bowleyana HOM05D009634 ORTHO05D009650 8.7e-15 84.3 122 41.8
Nitab4.5_0012334g0020 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.9e-14 83.2 105 48.6
Oeu059859.1 Olea europaea HOM05D009634 ORTHO05D009650 1.3e-13 80.5 111 43.2
SalBow6G2478 Salvia bowleyana HOM05D009634 ORTHO05D009650 1.3e-13 80.5 105 44.8
SalBow6G5252 Salvia bowleyana HOM05D009634 ORTHO05D009650 1.3e-13 80.5 105 44.8
SGA_v2.0_scaffold13G06494 Striga asiatica HOM05D009634 ORTHO05D009650 1.3e-13 80.5 114 43.0
Nitab4.5_0001850g0030 Nicotiana tabacum HOM05D009634 ORTHO05D009650 2.1e-13 79.7 67 64.2
Migut.F00890 Erythranthe guttata HOM05D009634 ORTHO05D009650 2.8e-13 79.3 107 44.9
Migut.F00892 Erythranthe guttata HOM05D009634 ORTHO05D009650 2.4e-12 76.3 110 43.6
Prupe.2G086100 Prunus persica HOM05D008140 ORTHO05D009650 2.4e-12 76.3 118 39.0
Cfa011231 Carpinus fangiana HOM05D008140 ORTHO05D009650 3.4e-11 72.4 131 38.9
Ciclev10033301m.g Citrus clementina HOM05D008140 ORTHO05D009650 4.5e-11 72.0 105 41.9
Cfa011233 Carpinus fangiana HOM05D008140 ORTHO05D009650 1.3e-10 70.5 102 39.2
Manes.07G090200 Manihot esculenta HOM05D008140 ORTHO05D009650 1.3e-10 70.5 106 40.6
Haze_02597 Corylus avellana HOM05D008140 ORTHO05D009650 2.9e-10 69.3 135 38.5
MD07G1068400 Malus domestica HOM05D008140 ORTHO05D009650 2.9e-10 69.3 119 37.0
Rhsim03G0105800 Rhododendron simsii HOM05D008140 ORTHO05D009650 1.1e-09 67.4 114 39.5
QL04p042101 Quercus lobata HOM05D008140 ORTHO05D009650 1.4e-09 67.0 122 36.1
Migut.F00891 Erythranthe guttata HOM05D009634 ORTHO05D009650 2.4e-09 66.2 130 36.9
Duzib106G0172 Durio zibethinus HOM05D008140 ORTHO05D009650 3.2e-09 65.9 132 33.3
RcHm_v2.0_Chr1g0333151 Rosa chinensis HOM05D008140 ORTHO05D009650 5.5e-09 65.1 112 37.5
FAN01G1993 Fragaria x ananassa HOM05D008140 ORTHO05D009650 2.1e-08 63.2 113 33.6
RcHm_v2.0_Chr1g0333141 Rosa chinensis HOM05D008140 ORTHO05D009650 2.1e-08 63.2 112 36.6
Thecc.10G110900 Theobroma cacao HOM05D008140 ORTHO05D009650 3.5e-08 62.4 125 34.4
QL04p041477 Quercus lobata HOM05D008140 ORTHO05D009650 6.0e-08 61.6 143 34.3
Cfa011234 Carpinus fangiana HOM05D008140 ORTHO05D009650 7.9e-08 61.2 119 33.6
Potri.008G025200 Populus trichocarpa HOM05D008140 ORTHO05D009650 7.9e-08 61.2 106 37.7
Sabra10G0182500 Salix brachista HOM05D008140 ORTHO05D009650 1.8e-07 60.1 105 35.2
COL.COLO4_06812 Corchorus olitorius HOM05D008140 ORTHO05D009650 2.3e-07 59.7 172 32.6
FvH4_7g05940 Fragaria vesca HOM05D008140 ORTHO05D009650 3.0e-07 59.3 113 32.7
FAN06G2722 Fragaria x ananassa HOM05D008140 ORTHO05D009650 3.0e-07 59.3 113 32.7
Potri.008G025100 Populus trichocarpa HOM05D008140 ORTHO05D009650 3.0e-07 59.3 106 37.7
Haze_02595 Corylus avellana HOM05D008140 ORTHO05D009650 5.1e-07 58.5 121 35.5
FAN03G1479 Fragaria x ananassa HOM05D008140 ORTHO05D009650 5.1e-07 58.5 113 31.9
Sabra08G0016900 Salix brachista HOM05D008140 ORTHO05D009650 5.1e-07 58.5 107 38.3
Potri.010G235400 Populus trichocarpa HOM05D008140 ORTHO05D009650 6.7e-07 58.2 106 35.8
Ah.04g163690 Amaranthus hybridus HOM05D009634 ORTHO05D009650 8.7e-07 57.8 90 38.9
FAN10G4346 Fragaria x ananassa HOM05D008140 ORTHO05D009650 1.1e-06 57.4 113 31.9
Sp4g21180 Schrenkiella parvula HOM05D008140 ORTHO05D009650 1.9e-06 56.6 103 34.0
Haze_02596 Corylus avellana HOM05D008140 ORTHO05D009650 3.3e-06 55.8 115 32.2
CiPaw.13G036800 Carya illinoinensis HOM05D008140 ORTHO05D009650 9.6e-06 54.3 99 36.4


User provided reference genes

Program Settings