Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 3.7e-188 661.4 327 100.0
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 8.1e-188 660.2 327 99.7
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 1.9e-184 649.0 327 97.6
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 1.9e-168 595.9 330 88.2
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 1.2e-167 593.2 327 86.9
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 1.0e-166 590.1 330 87.6
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 3.7e-132 475.3 326 69.6
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 1.4e-131 473.4 278 82.7
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 2.8e-124 449.1 327 65.7
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 4.5e-122 441.8 323 66.6
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 6.6e-121 438.0 329 64.7
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 2.5e-120 436.0 328 64.0
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 3.3e-120 435.6 329 64.7
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 9.5e-120 434.1 333 65.2
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 4.7e-119 431.8 328 64.0
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 2.9e-116 422.5 328 61.6
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 7.0e-115 417.9 337 63.2
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 1.6e-114 416.8 374 57.2
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 7.3e-112 407.9 302 65.2
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 7.3e-112 407.9 320 63.1
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 7.3e-112 407.9 328 60.7
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 3.1e-110 402.5 328 61.0
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 5.8e-109 398.3 325 61.5
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 1.7e-108 396.7 318 61.6
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 4.3e-104 382.1 314 59.9
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 9.5e-104 380.9 323 58.5
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 1.2e-103 380.6 326 57.7
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 2.8e-103 379.4 323 57.3
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 1.1e-102 377.5 302 59.6
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 1.1e-102 377.5 323 58.2
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 4.0e-102 375.6 346 56.4
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 1.5e-101 373.6 314 58.3
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 2.0e-101 373.2 331 55.9
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 2.6e-101 372.9 335 55.8
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 1.3e-100 370.5 332 55.1
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 2.9e-100 369.4 331 58.6
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 2.9e-100 369.4 325 56.6
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 3.7e-100 369.0 304 58.2
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 1.1e-99 367.5 326 58.9
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 1.9e-99 366.7 332 55.7
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 3.5e-98 362.5 335 54.9
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 6.0e-98 361.7 336 56.8
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 6.0e-98 361.7 330 54.8
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 2.3e-97 359.8 336 56.2
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 5.1e-97 358.6 316 56.3
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 1.5e-96 357.1 319 56.4
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 1.9e-96 356.7 321 58.9
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 3.3e-96 355.9 329 54.4
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 7.3e-96 354.8 321 58.3
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 1.2e-95 354.0 331 52.0
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 2.8e-95 352.8 327 54.7
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 1.8e-94 350.1 332 54.2
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 3.1e-94 349.4 334 53.6
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 5.2e-94 348.6 357 51.3
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 1.5e-93 347.1 345 55.1
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 4.4e-93 345.5 331 53.8
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 4.4e-93 345.5 327 53.2
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 7.6e-93 344.7 331 52.3
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 9.9e-93 344.4 250 66.8
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 1.3e-92 344.0 352 49.4
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 2.9e-92 342.8 329 51.4
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 4.9e-92 342.0 329 51.4
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 6.4e-92 341.7 334 52.7
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 1.4e-91 340.5 347 50.7
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 1.4e-91 340.5 329 51.4
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 1.4e-91 340.5 332 54.5
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 1.9e-91 340.1 350 50.6
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 3.2e-91 339.3 332 51.2
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 9.3e-91 337.8 350 50.9
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 9.3e-91 337.8 332 50.9
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 2.7e-90 336.3 348 50.6
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 1.0e-89 334.3 255 64.7
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 1.3e-89 334.0 342 49.1
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 3.0e-89 332.8 354 49.2
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 1.9e-88 330.1 332 52.4
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 4.3e-88 328.9 321 51.7
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 5.6e-88 328.6 350 51.4
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 1.6e-87 327.0 344 49.4
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 8.1e-87 324.7 322 52.5
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 3.1e-86 322.8 308 52.3
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 4.0e-86 322.4 323 50.8
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 5.3e-86 322.0 322 51.6
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 5.3e-86 322.0 326 51.8
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 1.3e-84 317.4 361 46.5
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 1.3e-84 317.4 359 46.2
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 1.7e-84 317.0 361 46.3
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 2.2e-84 316.6 318 50.6
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 6.4e-84 315.1 359 46.0
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 1.4e-83 313.9 310 51.3
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 5.4e-83 312.0 345 51.0
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 4.6e-82 308.9 322 50.0
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 6.0e-82 308.5 343 48.1
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 3.3e-80 302.8 344 48.3
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 2.1e-79 300.1 376 44.4
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 1.4e-78 297.4 336 46.7
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 2.4e-78 296.6 354 47.7
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 9.0e-78 294.7 340 47.1
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 5.8e-77 292.0 360 46.4
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 2.0e-69 266.9 317 47.6
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 2.6e-69 266.5 237 54.9
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 3.4e-61 239.6 280 45.7
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 3.3e-56 223.0 201 54.2
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 2.8e-55 219.9 178 61.8
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 6.5e-52 208.8 335 39.1
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 9.4e-51 204.9 335 38.8
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 8.2e-47 191.8 323 36.8
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 2.0e-45 187.2 246 38.2
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 1.3e-44 184.5 339 35.7
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 7.9e-42 175.3 217 39.6
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 1.4e-38 164.5 210 43.3
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 4.5e-37 159.5 221 38.9
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 7.7e-37 158.7 222 39.6
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.9e-36 156.8 231 36.8
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 8.5e-36 155.2 231 36.4
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 5.5e-35 152.5 228 40.4
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.0e-33 148.3 218 40.4
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.8e-33 147.5 203 38.4
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 5.2e-33 146.0 232 33.2
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 9.7e-32 141.7 208 36.1
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.7e-28 131.0 356 27.5
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 1.2e-26 124.8 120 50.8
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 3.6e-26 123.2 85 68.2
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 1.7e-23 114.4 117 49.6
unitig_46.g18639 Utricularia gibba HOM05D006196 ORTHO05D007758 2.8e-23 113.6 92 58.7
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 4.5e-21 106.3 182 32.4
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 7.7e-21 105.5 130 42.3


User provided reference genes

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