Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 2.8e-293 1011.1 485 100.0
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 1.9e-273 945.3 491 92.3
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 2.7e-248 861.7 422 97.2
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 3.3e-217 758.4 370 96.8
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 2.4e-212 742.3 356 98.0
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 4.0e-207 724.9 401 85.0
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 8.3e-205 717.2 415 81.9
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 9.2e-204 713.8 401 84.3
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 7.8e-203 710.7 400 84.2
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 6.2e-200 701.0 480 70.4
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 6.6e-194 681.0 485 66.8
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 4.3e-193 678.3 484 67.1
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 2.1e-192 676.0 407 76.7
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.5e-190 669.8 503 65.0
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.0e-190 669.5 503 65.0
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.8e-190 667.9 503 65.2
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 1.3e-189 666.8 484 66.1
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.7e-189 666.4 503 64.8
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.2e-189 666.0 503 65.0
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.4e-189 664.1 503 65.0
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.4e-189 664.1 503 64.8
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.1e-188 663.7 503 64.8
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 1.1e-188 663.7 477 66.5
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 1.1e-188 663.7 452 66.6
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.4e-188 662.5 500 65.0
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.4e-188 661.4 503 64.2
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.1e-188 661.0 503 64.6
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.6e-187 659.8 503 64.4
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 2.1e-187 659.4 469 67.0
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 7.8e-187 657.5 469 65.9
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 1.0e-186 657.1 462 66.7
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 1.7e-186 656.4 475 65.7
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 1.7e-186 656.4 476 66.2
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.3e-186 656.0 503 64.2
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 3.0e-186 655.6 474 65.8
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 3.9e-186 655.2 504 62.7
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 1.5e-185 653.3 484 64.9
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 9.6e-185 650.6 487 64.1
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 1.2e-184 650.2 476 66.2
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 2.8e-184 649.0 475 65.9
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 4.7e-184 648.3 400 74.0
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 5.8e-182 641.3 495 63.6
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 1.3e-181 640.2 485 63.5
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 2.2e-181 639.4 490 63.9
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 2.2e-181 639.4 495 62.6
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 4.2e-180 635.2 481 63.8
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 7.1e-180 634.4 399 73.4
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 4.6e-179 631.7 491 62.3
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 1.7e-178 629.8 471 62.6
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 3.9e-178 628.6 480 62.3
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 5.1e-178 628.2 398 71.1
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 6.6e-178 627.9 487 61.2
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 1.1e-177 627.1 481 63.2
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 9.6e-177 624.0 399 73.2
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 1.6e-176 623.2 466 64.2
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.8e-175 619.8 398 71.1
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 4.0e-175 618.6 395 70.1
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 2.0e-174 616.3 467 63.4
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 2.0e-174 616.3 399 69.7
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 4.5e-174 615.1 481 61.7
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 2.2e-173 612.8 399 70.7
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 3.2e-172 609.0 388 71.9
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 4.2e-172 608.6 475 62.7
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 4.6e-171 605.1 462 62.3
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 7.9e-171 604.4 495 59.4
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 1.3e-170 603.6 360 75.6
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 3.9e-170 602.1 467 63.2
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 6.7e-170 601.3 467 62.3
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 1.1e-169 600.5 460 62.4
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 2.5e-169 599.4 460 62.0
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 3.3e-169 599.0 461 62.3
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 7.4e-169 597.8 395 68.9
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 9.6e-169 597.4 475 61.7
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 2.1e-168 596.3 397 68.5
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 2.4e-167 592.8 399 69.4
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 4.0e-167 592.0 454 63.0
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 9.9e-166 587.4 403 67.7
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 1.7e-165 586.6 456 62.1
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 8.4e-165 584.3 372 70.2
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 2.4e-164 582.8 368 71.7
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 5.5e-164 581.6 463 60.0
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 7.1e-164 581.3 401 68.1
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 2.3e-162 576.2 457 61.9
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 5.1e-154 548.5 351 71.5
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 1.8e-151 540.0 398 62.3
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 1.8e-151 540.0 347 70.0
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 6.9e-151 538.1 419 60.4
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 1.1e-148 530.8 487 55.4
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 1.4e-148 530.4 464 57.8
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 3.0e-146 522.7 492 54.1
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 2.0e-142 510.0 470 55.7
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 3.0e-130 469.5 399 55.9
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 4.8e-128 462.2 397 56.9
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 1.6e-126 457.2 287 73.9
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 4.1e-119 432.6 448 50.4
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 2.2e-112 410.2 352 57.4
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 5.4e-103 379.0 401 49.1
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 6.2e-91 339.0 293 54.9
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 2.3e-90 337.0 207 74.4
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 1.5e-89 334.3 431 43.9
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 7.1e-79 298.9 454 39.9
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 6.4e-72 275.8 465 38.7
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 2.0e-65 254.2 298 45.0
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 9.3e-63 245.4 157 67.5
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 4.3e-60 236.5 394 36.5
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 8.2e-43 179.1 215 47.0
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 1.3e-35 155.2 318 31.4
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 3.6e-30 137.1 297 32.7
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 1.1e-28 132.1 93 66.7
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 3.1e-26 124.0 311 31.5
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 1.8e-18 98.2 67 68.7
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 3.6e-14 84.0 59 62.7
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 5.3e-10 70.1 110 38.2


User provided reference genes

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