Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 8.3e-199 696.8 346 100.0
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 2.5e-171 605.5 306 98.7
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 5.2e-169 597.8 354 85.3
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.5e-160 569.7 306 92.5
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 8.7e-148 527.3 308 85.1
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 1.5e-144 516.5 341 77.7
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 1.5e-131 473.4 322 73.0
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 6.3e-130 468.0 302 75.5
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 8.2e-130 467.6 322 70.8
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 5.3e-129 464.9 354 66.7
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 6.9e-129 464.5 354 67.2
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 4.7e-125 451.8 327 69.7
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 7.9e-125 451.1 329 70.2
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 1.4e-124 450.3 335 68.4
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 8.8e-124 447.6 318 69.8
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 5.7e-123 444.9 320 69.1
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 5.7e-123 444.9 348 65.5
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 9.7e-123 444.1 350 64.6
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 9.7e-123 444.1 312 72.1
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 2.8e-122 442.6 318 67.9
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 3.7e-122 442.2 319 67.7
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 4.8e-122 441.8 347 65.4
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 1.4e-121 440.3 338 65.4
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 2.4e-121 439.5 326 67.2
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 4.1e-121 438.7 321 67.6
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 6.9e-121 438.0 289 72.3
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 1.2e-120 437.2 293 73.0
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 1.2e-120 437.2 327 66.7
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 2.6e-120 436.0 356 64.0
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 5.9e-120 434.9 350 63.1
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 5.9e-120 434.9 322 66.8
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 5.9e-120 434.9 342 64.0
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 7.7e-120 434.5 289 71.6
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 3.8e-119 432.2 340 65.3
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 5.0e-119 431.8 330 66.4
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 6.5e-119 431.4 330 66.4
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 8.5e-119 431.0 289 71.3
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 1.4e-118 430.3 337 65.6
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 1.4e-118 430.3 289 71.6
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 3.2e-118 429.1 294 70.7
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 7.2e-118 427.9 292 71.6
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 9.4e-118 427.6 340 63.2
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 1.2e-117 427.2 333 64.3
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.6e-117 426.8 330 65.8
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 8.0e-117 424.5 324 65.1
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 1.0e-116 424.1 294 70.1
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 1.0e-116 424.1 333 64.0
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 1.0e-116 424.1 274 75.5
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 1.0e-116 424.1 293 70.0
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 3.0e-116 422.5 335 62.7
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 8.8e-116 421.0 386 59.1
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 1.5e-115 420.2 303 67.7
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 4.4e-115 418.7 313 66.1
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 7.4e-115 417.9 346 63.9
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 6.3e-114 414.8 336 63.1
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 8.2e-114 414.5 338 60.9
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 1.8e-113 413.3 322 64.0
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 1.8e-113 413.3 289 70.2
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 2.4e-113 412.9 349 62.2
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 4.1e-113 412.1 282 70.9
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 5.3e-113 411.8 340 60.6
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 1.2e-112 410.6 332 62.3
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 3.5e-112 409.1 337 61.7
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 4.5e-112 408.7 308 65.9
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 5.9e-112 408.3 331 61.9
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 1.3e-111 407.1 299 67.9
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 1.7e-111 406.8 289 70.2
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 6.5e-111 404.8 299 66.2
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 8.5e-111 404.4 287 68.3
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.5e-110 403.7 208 97.1
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 7.2e-110 401.4 319 63.9
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 3.6e-109 399.1 337 63.2
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 2.3e-108 396.4 297 65.3
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 1.2e-107 394.0 315 62.5
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 2.0e-107 393.3 323 61.6
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 5.7e-107 391.7 339 59.3
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 7.5e-107 391.3 304 65.1
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 9.7e-107 391.0 298 65.1
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 9.7e-107 391.0 287 65.9
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 2.8e-106 389.4 317 63.4
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 8.2e-106 387.9 330 61.2
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.1e-105 387.5 238 82.4
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 1.2e-104 384.0 355 58.0
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 8.8e-100 367.9 271 66.1
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 3.1e-97 359.4 268 66.8
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 1.2e-96 357.5 336 55.4
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 2.0e-96 356.7 291 62.2
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.0e-96 356.7 275 66.2
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 7.7e-96 354.8 290 60.3
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.7e-95 353.6 283 63.6
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 8.0e-93 344.7 221 74.7
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.2e-92 342.0 300 60.3
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.4e-89 332.0 272 63.2
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 1.2e-88 330.9 266 59.8
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 1.4e-84 317.4 293 58.7
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 2.1e-77 293.5 389 42.4
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 1.4e-76 290.8 253 61.3
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.8e-60 237.3 160 71.9
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 4.4e-59 232.6 172 68.6
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 1.2e-56 224.6 266 48.5
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 8.1e-53 211.8 150 69.3
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.4e-52 211.1 142 69.7
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 1.6e-45 187.6 195 53.8
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.2e-45 185.7 253 45.5
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 1.0e-39 168.3 108 72.2
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 3.9e-39 166.4 107 72.0
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.6e-38 162.5 183 51.4
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 7.4e-38 162.2 183 51.4
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 1.6e-32 144.4 89 77.5
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 4.3e-30 136.3 82 78.0
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 7.6e-27 125.6 89 65.2
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 4.3e-22 109.8 66 75.8
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 7.7e-19 99.0 57 80.7
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 6.5e-18 95.9 144 41.7
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.6e-16 90.1 81 56.8
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 1.5e-11 74.7 63 58.7
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.9e-11 72.8 56 62.5
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 2.5e-09 67.4 41 73.2
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 2.3e-07 60.8 81 40.7
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 3.9e-07 60.1 45 66.7
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 2.0e-06 57.8 44 63.6


User provided reference genes

Program Settings