Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g006330.1 Solanum lycopersicum HOM05D000021 ORTHO05D016322 4.4e-46 187.6 94 100.0
PSO017G4011 Papaver somniferum HOM05D000021 ORTHO05D000010 5.5e-12 74.3 80 51.2
BcaB03g16482 Brassica carinata HOM05D000021 ORTHO05D000010 1.6e-11 72.8 74 51.4
CARHR155700 Cardamine hirsuta HOM05D000021 ORTHO05D000010 3.6e-11 71.6 65 50.8
MD12G1130700 Malus domestica HOM05D000021 ORTHO05D000010 6.1e-11 70.9 66 51.5
ECA238G4300 Erigeron canadensis HOM05D000021 ORTHO05D000010 1.0e-10 70.1 67 56.7
PGR002G0006 Punica granatum HOM05D000021 ORTHO05D000010 1.0e-10 70.1 69 53.6
AL5G26350 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 1.8e-10 69.3 70 50.0
Medtr1g029940 Medicago truncatula HOM05D000021 ORTHO05D000010 1.8e-10 69.3 72 50.0
Carub.0005s1369 Capsella rubella HOM05D000021 ORTHO05D000010 2.3e-10 68.9 71 50.7
CAN.G1909.6 Capsicum annuum HOM05D000021 ORTHO05D000010 3.0e-10 68.6 74 51.4
HanXRQChr11g0322811 Helianthus annuus HOM05D000021 ORTHO05D000010 3.0e-10 68.6 70 50.0
Nitab4.5_0000102g0110 Nicotiana tabacum HOM05D000021 ORTHO05D016322 3.9e-10 68.2 74 52.7
ECA236G2320 Erigeron canadensis HOM05D000021 ORTHO05D000010 5.1e-10 67.8 67 55.2
Solyc10g012140.2 Solanum lycopersicum HOM05D000021 ORTHO05D000010 6.7e-10 67.4 69 52.2
DCAR_027544 Daucus carota HOM05D000164 ORTHO05D175069 8.8e-10 67.0 70 52.9
FAN03G0892 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.1e-09 66.6 66 56.1
FAN03G2009 Fragaria x ananassa HOM05D000021 ORTHO05D016322 1.1e-09 66.6 66 56.1
Nitab4.5_0000073g0590 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.1e-09 66.6 41 75.6
Nitab4.5_0024241g0010 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.1e-09 66.6 73 47.9
Carub.0219s0001 Capsella rubella HOM05D000021 ORTHO05D000010 2.0e-09 65.9 74 45.9
AT3G47570 Arabidopsis thaliana HOM05D000021 ORTHO05D000010 3.3e-09 65.1 75 44.0
Lsat_1_v5_gn_2_120901 Lactuca sativa HOM05D000021 ORTHO05D000010 3.3e-09 65.1 66 54.5
AUR62003277 Chenopodium quinoa HOM05D000021 ORTHO05D000010 4.3e-09 64.7 68 50.0
AUR62027194 Chenopodium quinoa HOM05D000021 ORTHO05D000010 4.3e-09 64.7 66 48.5
BcaC01g03149 Brassica carinata HOM05D000021 ORTHO05D000010 5.7e-09 64.3 68 48.5
Gohir.D10G214133 Gossypium hirsutum HOM05D000021 ORTHO05D047932 9.7e-09 63.5 70 48.6
Gorai.009G365700 Gossypium raimondii HOM05D000021 ORTHO05D000010 9.7e-09 63.5 69 44.9
Gorai.011G239600 Gossypium raimondii HOM05D000021 ORTHO05D047932 9.7e-09 63.5 70 48.6
Sc14g0005310 Simmondsia chinensis HOM05D000021 ORTHO05D000010 9.7e-09 63.5 67 49.3
Eucgr.F04393 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.3e-08 63.2 69 46.4
Thhalv10028397m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 1.7e-08 62.8 65 47.7
FAN01G2754 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.7e-08 62.8 69 49.3
MD07G1255300 Malus domestica HOM05D000021 ORTHO05D000010 1.7e-08 62.8 67 50.7
TPR.G40197 Trifolium pratense HOM05D000021 ORTHO05D000010 1.7e-08 62.8 67 49.3
QL05p084691 Quercus lobata HOM05D000021 ORTHO05D000010 2.8e-08 62.0 48 62.5
Thecc.07G113600 Theobroma cacao HOM05D000021 ORTHO05D000010 2.8e-08 62.0 79 43.0
QL05p084760 Quercus lobata HOM05D000021 ORTHO05D000010 4.8e-08 61.2 50 62.0
CAN.G619.25 Capsicum annuum HOM05D000021 ORTHO05D000010 8.2e-08 60.5 99 36.4
Thhalv10010091m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 1.1e-07 60.1 71 47.9
MD12G1134500 Malus domestica HOM05D000021 ORTHO05D000010 1.1e-07 60.1 65 43.1
QL05p084720 Quercus lobata HOM05D000021 ORTHO05D000010 1.1e-07 60.1 54 57.4
BolC3t13826H Brassica oleracea HOM05D000021 ORTHO05D000010 1.4e-07 59.7 64 50.0
Duzib093G2061 Durio zibethinus HOM05D000021 ORTHO05D000010 1.4e-07 59.7 75 45.3
HanXRQChr04g0101741 Helianthus annuus HOM05D000021 ORTHO05D000010 1.4e-07 59.7 67 52.2
HanXRQChr07g0198501 Helianthus annuus HOM05D000021 ORTHO05D000010 1.4e-07 59.7 55 60.0
Phvul.002G124200 Phaseolus vulgaris HOM05D000021 ORTHO05D000010 1.4e-07 59.7 87 41.4
Sopen11g010560 Solanum pennellii HOM05D000021 ORTHO05D000010 1.4e-07 59.7 67 44.8
AUR62003269 Chenopodium quinoa HOM05D000021 ORTHO05D000010 1.8e-07 59.3 48 56.2
Potri.006G099100 Populus trichocarpa HOM05D000021 ORTHO05D000010 1.8e-07 59.3 53 54.7
C03p13730 Brassica napus HOM05D000021 ORTHO05D000010 2.4e-07 58.9 65 47.7
QL05p084418 Quercus lobata HOM05D000021 ORTHO05D000010 2.4e-07 58.9 46 63.0
QL10p043652 Quercus lobata HOM05D000021 ORTHO05D000010 2.4e-07 58.9 50 60.0
CSS0041810 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 3.1e-07 58.5 68 51.5
HanXRQChr07g0199631 Helianthus annuus HOM05D000021 ORTHO05D000010 3.1e-07 58.5 56 53.6
MD05G1075800 Malus domestica HOM05D000021 ORTHO05D000010 3.1e-07 58.5 69 42.0
Nitab4.5_0001265g0110 Nicotiana tabacum HOM05D000021 ORTHO05D000010 3.1e-07 58.5 61 47.5
Prupe.1G072900 Prunus persica HOM05D000021 ORTHO05D000010 4.1e-07 58.2 93 38.7
QL10p043657 Quercus lobata HOM05D000021 ORTHO05D000010 4.1e-07 58.2 54 53.7
CSS0007625 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 5.3e-07 57.8 69 46.4
CAN.G189.37 Capsicum annuum HOM05D000021 ORTHO05D000010 5.3e-07 57.8 64 45.3
ECA247G1650 Erigeron canadensis HOM05D000021 ORTHO05D000010 5.3e-07 57.8 66 45.5
MBI14_g34601_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 5.3e-07 57.8 53 54.7
QL05p004684 Quercus lobata HOM05D000021 ORTHO05D000010 5.3e-07 57.8 49 57.1
QL10p043140 Quercus lobata HOM05D000021 ORTHO05D000010 5.3e-07 57.8 50 58.0
CSS0020866 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 6.9e-07 57.4 58 53.4
Ciclev10033352m.g Citrus clementina HOM05D000021 ORTHO05D000010 6.9e-07 57.4 70 48.6
DCAR_015434 Daucus carota HOM05D000021 ORTHO05D000010 6.9e-07 57.4 44 61.4
ECA238G3398 Erigeron canadensis HOM05D000021 ORTHO05D000010 6.9e-07 57.4 78 41.0
PGR042G1605 Punica granatum HOM05D000021 ORTHO05D000010 6.9e-07 57.4 67 44.8
QL10p043197 Quercus lobata HOM05D000021 ORTHO05D000010 6.9e-07 57.4 50 58.0
CSS0040340 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 9.1e-07 57.0 55 54.5
Cc11_g03030 Coffea canephora HOM05D000021 ORTHO05D000010 9.1e-07 57.0 71 42.3
HanXRQChr06g0165341 Helianthus annuus HOM05D000021 ORTHO05D000010 9.1e-07 57.0 59 55.9
HanXRQChr14g0460171 Helianthus annuus HOM05D000021 ORTHO05D000562 9.1e-07 57.0 58 55.2
Manes.10G134903 Manihot esculenta HOM05D000021 ORTHO05D000010 9.1e-07 57.0 48 52.1
QL10p043296 Quercus lobata HOM05D000021 ORTHO05D000010 9.1e-07 57.0 49 57.1
CAN.G866.9 Capsicum annuum HOM05D000021 ORTHO05D000010 1.2e-06 56.6 63 44.4
HanXRQChr04g0101721 Helianthus annuus HOM05D000021 ORTHO05D000010 1.2e-06 56.6 54 57.4
HanXRQChr04g0102841 Helianthus annuus HOM05D000021 ORTHO05D000010 1.2e-06 56.6 54 57.4
HanXRQChr07g0196681 Helianthus annuus HOM05D036317 ORTHO05D000010 1.2e-06 56.6 58 53.4
QL10p043364 Quercus lobata HOM05D000021 ORTHO05D000010 1.2e-06 56.6 66 47.0
Cpa.g.sc19.169 Carica papaya HOM05D000021 ORTHO05D000010 1.5e-06 56.2 47 61.7
Ciclev10000036m.g Citrus clementina HOM05D000021 ORTHO05D000010 1.5e-06 56.2 95 35.8
ECA233G4909 Erigeron canadensis HOM05D000021 ORTHO05D000010 1.5e-06 56.2 54 57.4
Eucgr.G02274 Eucalyptus grandis HOM05D000132 ORTHO05D000058 1.5e-06 56.2 61 42.6
HanXRQChr06g0165281 Helianthus annuus HOM05D000021 ORTHO05D000010 1.5e-06 56.2 59 55.9
Lsat_1_v5_gn_2_117861 Lactuca sativa HOM05D000021 ORTHO05D000010 1.5e-06 56.2 54 55.6
Sp2g09620 Schrenkiella parvula HOM05D000021 ORTHO05D000010 1.5e-06 56.2 60 50.0
vmacro06979 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 1.5e-06 56.2 60 45.0
ECA246G4945 Erigeron canadensis HOM05D000021 ORTHO05D000010 2.0e-06 55.8 48 58.3
Lj3P765T9 Lonicera japonica HOM05D035487 ORTHO05D016322 2.0e-06 55.8 39 71.8
PGSC0003DMG400011509 Solanum tuberosum HOM05D000021 ORTHO05D000010 2.0e-06 55.8 59 49.2
Thecc.10G021400 Theobroma cacao HOM05D000021 ORTHO05D000010 2.0e-06 55.8 54 55.6
TAR627G1154 Trochodendron aralioides HOM05D000021 ORTHO05D000010 2.0e-06 55.8 66 48.5
ECA238G0524 Erigeron canadensis HOM05D000021 ORTHO05D000010 2.6e-06 55.5 55 54.5
FAN25G0369 Fragaria x ananassa HOM05D000021 ORTHO05D000010 2.6e-06 55.5 66 47.0
QL10p043243 Quercus lobata HOM05D000021 ORTHO05D000010 2.6e-06 55.5 53 52.8
RcHm_v2.0_Chr1g0334911 Rosa chinensis HOM05D000021 ORTHO05D000010 2.6e-06 55.5 58 53.4
PGSC0003DMG400015081 Solanum tuberosum HOM05D000021 ORTHO05D000010 2.6e-06 55.5 64 42.2
PGSC0003DMG402020019 Solanum tuberosum HOM05D000021 ORTHO05D000010 2.6e-06 55.5 66 47.0
CSS0038994 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 3.4e-06 55.1 94 35.1
Haze_19484 Corylus avellana HOM05D000021 ORTHO05D000010 3.4e-06 55.1 70 42.9
HanXRQChr07g0197111 Helianthus annuus HOM05D000021 ORTHO05D000010 3.4e-06 55.1 45 62.2
MBI14_g39023_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 3.4e-06 55.1 54 55.6
Oeu006879.1 Olea europaea HOM05D000021 ORTHO05D000010 3.4e-06 55.1 70 42.9
Peaxi162Scf00025g02924 Petunia axillaris HOM05D000021 ORTHO05D000010 3.4e-06 55.1 69 44.9
QL04p021030 Quercus lobata HOM05D000021 ORTHO05D000010 3.4e-06 55.1 59 50.8
QL08p055714 Quercus lobata HOM05D000021 ORTHO05D000010 3.4e-06 55.1 50 54.0
CAN.G404.19 Capsicum annuum HOM05D000021 ORTHO05D000010 4.5e-06 54.7 64 42.2
Manes.10G128200 Manihot esculenta HOM05D000021 ORTHO05D000010 4.5e-06 54.7 52 46.2
Manes.10G130433 Manihot esculenta HOM05D000021 ORTHO05D000010 4.5e-06 54.7 52 46.2
Medtr1g029930 Medicago truncatula HOM05D000021 ORTHO05D000010 4.5e-06 54.7 87 35.6
CiPaw.16G044400 Carya illinoinensis HOM05D000021 ORTHO05D000010 5.9e-06 54.3 59 49.2
HanXRQChr14g0460291 Helianthus annuus HOM05D000021 ORTHO05D000010 5.9e-06 54.3 59 52.5
RcHm_v2.0_Chr1g0355931 Rosa chinensis HOM05D000021 ORTHO05D000010 5.9e-06 54.3 66 45.5
CAN.G73.4 Capsicum annuum HOM05D000021 ORTHO05D000010 7.7e-06 53.9 49 51.0
Cc00_g21320 Coffea canephora HOM05D000021 ORTHO05D000010 7.7e-06 53.9 48 52.1
Eucgr.C01565 Eucalyptus grandis HOM05D000021 ORTHO05D000010 7.7e-06 53.9 45 62.2
HanXRQChr07g0196941 Helianthus annuus HOM05D000021 ORTHO05D000010 7.7e-06 53.9 54 53.7
HanXRQChr07g0199601 Helianthus annuus HOM05D000021 ORTHO05D000010 7.7e-06 53.9 54 51.9
Lj3P764T0 Lonicera japonica HOM05D053780 ORTHO05D000010 7.7e-06 53.9 47 57.4
QL10p043336 Quercus lobata HOM05D000021 ORTHO05D000010 7.7e-06 53.9 50 56.0


User provided reference genes

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