Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g006150.1 Solanum lycopersicum HOM05D000923 ORTHO05D390386 3.4e-97 358.2 169 100.0
Solyc11g006180.2 Solanum lycopersicum HOM05D000923 ORTHO05D000720 6.4e-19 98.2 157 40.8
Sopen11g002110 Solanum pennellii HOM05D000923 ORTHO05D000720 6.4e-19 98.2 157 40.8
PGSC0003DMG400028694 Solanum tuberosum HOM05D000923 ORTHO05D000720 6.4e-19 98.2 157 40.8
CAN.G1256.8 Capsicum annuum HOM05D000923 ORTHO05D000720 1.9e-18 96.7 157 40.1
Peaxi162Scf00120g00517 Petunia axillaris HOM05D000923 ORTHO05D000720 7.0e-18 94.7 157 40.1
Nitab4.5_0000856g0210 Nicotiana tabacum HOM05D000923 ORTHO05D000720 2.3e-16 89.7 157 38.9
Nitab4.5_0004928g0060 Nicotiana tabacum HOM05D000923 ORTHO05D000720 2.3e-16 89.7 157 38.9
Peaxi162Scf00519g00115 Petunia axillaris HOM05D000923 ORTHO05D000720 3.1e-13 79.3 59 62.7
Cc02_g09070 Coffea canephora HOM05D000923 ORTHO05D000720 3.4e-12 75.9 58 60.3
Nitab4.5_0000687g0110 Nicotiana tabacum HOM05D000923 ORTHO05D000720 1.4e-10 70.5 59 54.2
Nitab4.5_0006096g0020 Nicotiana tabacum HOM05D000923 ORTHO05D000720 3.2e-10 69.3 59 52.5
Lj2C39T5 Lonicera japonica HOM05D000923 ORTHO05D000720 5.4e-10 68.6 59 59.3
Solyc05g055070.4 Solanum lycopersicum HOM05D000923 ORTHO05D000720 3.5e-09 65.9 57 56.1
Sopen05g033530 Solanum pennellii HOM05D000923 ORTHO05D000720 3.5e-09 65.9 57 56.1
Sopen11g002090 Solanum pennellii HOM05D000923 ORTHO05D037724 3.5e-09 65.9 79 51.9
CAN.G1465.3 Capsicum annuum HOM05D000923 ORTHO05D000720 4.6e-09 65.5 59 54.2
Dinv14627 Davidia involucrata HOM05D000923 ORTHO05D000720 7.8e-09 64.7 57 57.9
CAN.G473.148 Capsicum annuum HOM05D000923 ORTHO05D000720 1.3e-08 63.9 59 52.5
PGSC0003DMG400023402 Solanum tuberosum HOM05D000923 ORTHO05D000720 2.3e-08 63.2 57 52.6
CSS0007944 Camellia sinensis var. sinensis HOM05D000923 ORTHO05D000720 8.6e-08 61.2 60 51.7
CSS0023519 Camellia sinensis var. sinensis HOM05D000923 ORTHO05D000720 8.6e-08 61.2 60 51.7
Actinidia06780 Actinidia chinensis HOM05D000923 ORTHO05D000720 1.9e-07 60.1 60 53.3
QL01p042007 Quercus lobata HOM05D000923 ORTHO05D000720 4.3e-07 58.9 57 49.1
QL03p032139 Quercus lobata HOM05D000923 ORTHO05D000720 4.3e-07 58.9 57 49.1
QL03p032324 Quercus lobata HOM05D000923 ORTHO05D000720 4.3e-07 58.9 57 49.1
CSS0018101 Camellia sinensis var. sinensis HOM05D000923 ORTHO05D000720 9.5e-07 57.8 59 47.5
Oeu033247.1 Olea europaea HOM05D000923 ORTHO05D000720 2.1e-06 56.6 60 41.7


User provided reference genes

Program Settings