Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 9.1e-202 706.8 392 100.0
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 6.7e-197 690.6 392 93.9
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 3.6e-190 668.3 392 93.9
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 7.3e-167 590.9 393 84.0
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 2.8e-166 589.0 397 83.4
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 1.2e-164 583.6 358 89.1
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 9.8e-164 580.5 408 80.1
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 1.8e-133 479.9 411 68.4
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 1.3e-131 473.8 396 67.9
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 1.1e-130 470.7 355 71.0
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 1.4e-130 470.3 403 66.0
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 2.4e-130 469.5 359 71.6
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 7.1e-130 468.0 359 71.0
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 9.3e-130 467.6 355 70.1
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 1.2e-129 467.2 358 71.5
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 2.7e-129 466.1 408 64.5
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 3.5e-129 465.7 357 70.3
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 3.5e-129 465.7 355 70.4
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 4.6e-129 465.3 417 64.0
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 1.0e-128 464.2 355 69.9
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 1.0e-128 464.2 409 64.3
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 1.3e-128 463.8 415 65.3
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 5.1e-128 461.8 400 69.5
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 6.7e-128 461.5 410 64.9
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 5.6e-127 458.4 357 68.3
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 9.6e-127 457.6 355 69.9
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 1.3e-126 457.2 397 63.7
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 1.6e-126 456.8 411 65.2
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 1.4e-125 453.8 412 65.3
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 1.8e-125 453.4 403 66.0
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 5.3e-125 451.8 358 68.7
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 7.6e-124 448.0 402 65.4
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 9.9e-124 447.6 410 63.7
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 2.2e-123 446.4 413 61.5
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 2.2e-123 446.4 422 60.7
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.9e-123 446.0 427 61.8
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 3.8e-123 445.7 404 62.9
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 1.1e-122 444.1 408 64.5
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 9.3e-122 441.0 403 61.0
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 9.3e-122 441.0 369 66.9
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 1.2e-121 440.7 413 61.5
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 2.7e-121 439.5 402 61.7
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 6.0e-121 438.3 421 59.6
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 6.0e-121 438.3 358 69.8
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 1.3e-120 437.2 408 60.8
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 5.1e-120 435.3 395 63.0
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 6.7e-120 434.9 335 70.7
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 6.7e-120 434.9 411 60.1
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 1.1e-119 434.1 372 65.9
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 1.9e-119 433.3 400 62.0
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 3.3e-119 432.6 351 68.9
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 3.3e-119 432.6 433 58.9
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 3.3e-119 432.6 353 66.9
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.6e-118 430.3 433 58.4
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 1.6e-118 430.3 403 60.5
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 3.7e-118 429.1 427 59.5
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 3.7e-118 429.1 375 64.3
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 6.2e-118 428.3 428 58.6
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 1.4e-117 427.2 431 58.7
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 5.3e-117 425.2 402 60.4
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 6.9e-117 424.9 406 62.1
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 6.9e-117 424.9 429 58.5
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 9.0e-117 424.5 379 63.1
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 1.2e-116 424.1 424 59.2
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 1.2e-116 424.1 429 60.6
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 2.0e-116 423.3 404 62.1
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 2.0e-116 423.3 379 63.6
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 2.6e-116 422.9 445 56.2
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 1.3e-115 420.6 406 61.1
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 2.2e-115 419.9 411 62.5
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 2.2e-115 419.9 415 59.0
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 3.8e-115 419.1 470 54.5
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 6.5e-115 418.3 336 68.2
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 1.1e-114 417.5 433 57.0
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 1.9e-114 416.8 431 56.6
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 1.2e-113 414.1 428 55.6
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.6e-113 413.7 342 66.7
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 2.1e-113 413.3 425 57.9
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 6.0e-113 411.8 402 60.7
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.8e-112 410.2 342 66.4
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 3.0e-112 409.5 342 66.4
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 3.9e-112 409.1 350 66.0
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 3.9e-112 409.1 427 57.1
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 6.7e-112 408.3 427 55.0
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 8.7e-112 407.9 437 57.7
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 9.6e-111 404.4 432 55.6
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 1.3e-110 404.1 434 53.9
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 1.6e-110 403.7 426 55.6
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 1.6e-110 403.7 413 58.6
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 4.5e-108 395.6 427 54.8
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 1.3e-107 394.0 409 58.4
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 1.6e-105 387.1 412 56.3
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 1.0e-104 384.4 402 56.2
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 1.9e-103 380.2 318 65.1
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 2.5e-103 379.8 318 65.1
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 9.7e-103 377.9 377 57.0
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 6.3e-102 375.2 321 63.6
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 1.5e-95 354.0 328 61.3
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 2.8e-94 349.7 366 56.3
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 3.8e-91 339.3 338 55.0
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 3.3e-87 326.2 320 60.3
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 1.7e-86 323.9 305 61.6
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 8.5e-83 311.6 271 63.8
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 2.2e-78 297.0 372 48.4
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 2.8e-78 296.6 260 58.1
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 1.5e-74 284.3 319 58.0
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 2.7e-73 280.0 325 50.5
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 1.2e-71 274.6 380 44.7
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 8.6e-67 258.5 300 51.0
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 1.0e-64 251.5 204 69.1
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 4.7e-57 226.1 377 39.3
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 3.7e-46 189.9 134 73.1
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 1.1e-45 188.3 143 69.2
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 2.1e-41 174.1 198 50.0
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 4.0e-32 143.3 88 76.1
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 2.4e-24 117.5 323 29.1
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 6.9e-24 115.9 481 25.8
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 3.3e-18 97.1 86 60.5
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 4.5e-15 86.7 142 46.5
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 3.0e-11 73.9 319 24.5
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 5.1e-11 73.2 66 53.0
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 1.5e-10 71.6 46 67.4
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 2.5e-10 70.9 46 65.2
SHI23188 Sapria himalayana HOM05D006391 ORTHO05D007767 5.8e-07 59.7 118 41.5


User provided reference genes

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