Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g086770.3 Solanum lycopersicum HOM05D005750 ORTHO05D007126 4.3e-118 427.9 208 100.0
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 1.4e-105 386.3 194 97.4
PGSC0003DMG400019130 Solanum tuberosum HOM05D005750 ORTHO05D007126 3.2e-105 385.2 199 94.5
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 3.3e-94 348.6 194 86.6
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 2.4e-92 342.4 196 87.2
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 2.9e-90 335.5 194 83.5
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 1.7e-74 283.1 195 71.8
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 9.4e-73 277.3 193 71.5
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 4.7e-72 275.0 194 70.6
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 4.7e-72 275.0 194 68.6
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 2.3e-71 272.7 174 75.3
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 6.8e-71 271.2 190 73.2
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 8.8e-71 270.8 174 75.3
Actinidia29137 Actinidia chinensis HOM05D005750 ORTHO05D007126 1.2e-70 270.4 190 71.1
Ca_23809_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 1.2e-70 270.4 195 69.2
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 1.2e-70 270.4 186 72.0
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 3.4e-70 268.9 171 76.6
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 5.7e-70 268.1 190 71.6
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 5.7e-70 268.1 192 70.3
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 7.5e-70 267.7 173 74.6
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 9.8e-70 267.3 190 70.5
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 1.3e-69 266.9 176 73.9
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 1.7e-69 266.5 189 69.8
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 6.3e-69 264.6 189 68.8
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 8.3e-69 264.2 176 73.3
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 8.3e-69 264.2 190 69.5
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 1.1e-68 263.8 195 69.2
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 1.4e-68 263.5 173 73.4
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 3.1e-68 262.3 191 68.6
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 4.1e-68 261.9 196 67.9
Nn2g13588 Nelumbo nucifera HOM05D005750 ORTHO05D007126 4.1e-68 261.9 187 72.2
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 4.1e-68 261.9 189 68.8
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 5.4e-68 261.5 175 73.7
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 7.0e-68 261.2 175 72.6
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 9.1e-68 260.8 175 71.4
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 1.6e-67 260.0 175 70.9
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 2.0e-67 259.6 178 71.3
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 2.0e-67 259.6 178 71.3
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 2.0e-67 259.6 178 71.3
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 2.7e-67 259.2 197 68.0
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 3.5e-67 258.8 179 70.9
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 3.5e-67 258.8 179 70.9
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 5.9e-67 258.1 189 69.8
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 7.7e-67 257.7 191 67.0
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.3e-66 256.9 178 70.2
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.3e-66 256.9 178 70.2
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 1.3e-66 256.9 175 71.4
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 2.3e-66 256.1 205 64.9
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 2.3e-66 256.1 188 69.1
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 2.9e-66 255.8 176 72.7
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 2.9e-66 255.8 189 68.3
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 3.8e-66 255.4 186 69.4
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 5.0e-66 255.0 186 69.4
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 5.0e-66 255.0 180 71.1
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 5.0e-66 255.0 196 67.9
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 8.6e-66 254.2 186 68.8
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 1.1e-65 253.8 197 66.5
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 1.9e-65 253.1 191 66.5
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 1.9e-65 253.1 161 75.2
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 5.5e-65 251.5 192 66.1
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 2.1e-64 249.6 193 66.8
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 2.8e-64 249.2 194 64.4
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 4.7e-64 248.4 171 71.3
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 4.7e-64 248.4 177 68.4
ECA236G1744 Erigeron canadensis HOM05D005750 ORTHO05D007126 8.0e-64 247.7 176 69.9
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 1.4e-63 246.9 195 65.6
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 2.3e-63 246.1 187 63.6
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 3.0e-63 245.7 175 67.4
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 5.2e-63 245.0 186 64.0
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 5.2e-63 245.0 187 66.3
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 1.5e-62 243.4 188 64.9
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 2.6e-62 242.7 178 67.4
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 4.4e-62 241.9 197 63.5
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 4.4e-62 241.9 173 68.8
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 5.7e-62 241.5 177 67.8
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 5.7e-62 241.5 193 64.2
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 2.8e-61 239.2 191 64.9
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 3.7e-61 238.8 192 62.5
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 4.9e-61 238.4 177 67.2
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 1.1e-60 237.3 127 84.3
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 1.1e-60 237.3 194 61.9
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 2.4e-60 236.1 188 63.3
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 2.4e-60 236.1 178 69.1
AUR62025787 Chenopodium quinoa HOM05D005750 ORTHO05D007126 4.1e-60 235.3 189 63.0
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 1.2e-59 233.8 187 64.2
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 5.9e-59 231.5 176 65.9
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 5.9e-59 231.5 127 81.1
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 1.3e-58 230.3 181 64.1
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 1.3e-58 230.3 181 64.1
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 1.3e-58 230.3 204 59.3
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 6.6e-58 228.0 182 64.8
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 6.6e-58 228.0 181 63.5
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 6.6e-58 228.0 181 63.5
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 1.1e-57 227.3 169 68.0
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 1.5e-57 226.9 191 63.4
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 5.6e-57 224.9 180 65.6
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 5.6e-57 224.9 180 64.4
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 5.6e-57 224.9 180 64.4
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 5.6e-57 224.9 180 64.4
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 5.6e-57 224.9 177 65.5
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 7.3e-57 224.6 178 62.4
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 9.5e-57 224.2 178 64.6
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 9.5e-57 224.2 177 63.8
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 9.5e-57 224.2 179 64.2
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 2.1e-56 223.0 177 65.0
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 8.0e-56 221.1 182 63.2
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 8.0e-56 221.1 181 63.5
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 5.8e-54 214.9 187 56.1
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 2.9e-53 212.6 178 59.0
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 4.9e-53 211.8 200 55.5
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 6.4e-53 211.5 192 54.7
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 1.4e-52 210.3 126 77.0
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 7.0e-52 208.0 170 57.6
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 3.5e-51 205.7 121 76.0
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 3.9e-42 175.6 193 53.4
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 2.3e-39 166.4 128 61.7
TAR636G1840 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.2e-38 164.1 189 51.3
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 2.6e-38 162.9 118 65.3
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 1.2e-35 154.1 195 45.1
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 1.0e-34 151.0 194 49.5
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 4.3e-33 145.6 140 50.0
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 4.3e-33 145.6 198 42.4
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 6.4e-29 131.7 121 54.5
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 2.8e-24 116.3 130 44.6
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 9.9e-22 107.8 92 55.4
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 2.6e-14 83.2 200 29.0
PRCOL_00002333 Prasinoderma coloniale HOM05D005750 ORTHO05D007126 2.2e-13 80.1 144 34.7
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 1.8e-10 70.5 94 37.2


User provided reference genes

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