Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g055180.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.7e-108 396.0 197 100.0
Solyc10g055080.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 2.8e-66 255.8 144 86.8
Solyc10g055060.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.2e-64 250.4 248 56.0
PGSC0003DMG400021948 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.4e-62 242.7 141 82.3
Solyc12g016220.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 9.6e-51 204.1 149 65.1
Sopen12g022450 Solanum pennellii HOM05D000092 ORTHO05D000042 3.1e-49 199.1 141 65.2
Solyc12g044190.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 5.8e-48 194.9 143 62.9
PGSC0003DMG401008349 Solanum tuberosum HOM05D000092 ORTHO05D000042 6.5e-47 191.4 143 65.0
Sopen01g028960 Solanum pennellii HOM05D000092 ORTHO05D000042 5.5e-46 188.3 140 67.1
PGSC0003DMG400019094 Solanum tuberosum HOM05D000092 ORTHO05D000042 5.5e-46 188.3 146 64.4
Sopen12g008030 Solanum pennellii HOM05D000092 ORTHO05D000042 1.9e-43 179.9 129 66.7
PGSC0003DMG401016933 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.3e-39 167.2 206 47.1
Sopen10g029640 Solanum pennellii HOM05D000092 ORTHO05D000042 4.2e-38 162.2 141 61.0
PGSC0003DMG402011427 Solanum tuberosum HOM05D000092 ORTHO05D000042 7.9e-37 157.9 143 58.0
Solyc04g005540.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.0e-36 157.5 187 46.0
Sopen04g001580 Solanum pennellii HOM05D000092 ORTHO05D000042 1.3e-36 157.1 200 44.0
Solyc10g050050.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.8e-36 156.8 149 57.7
CAN.G1161.13 Capsicum annuum HOM05D000092 ORTHO05D000042 3.9e-36 155.6 194 44.8
Sopen04g001560 Solanum pennellii HOM05D000092 ORTHO05D000042 5.1e-36 155.2 187 44.9
CAN.G1161.16 Capsicum annuum HOM05D000092 ORTHO05D000042 1.3e-34 150.6 193 45.1
PGSC0003DMG400021477 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.2e-34 149.8 202 42.6
PGSC0003DMG400011425 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.8e-34 149.4 146 54.8
PGSC0003DMG401017416 Solanum tuberosum HOM05D000092 ORTHO05D000042 3.1e-33 146.0 189 45.0
PGSC0003DMG402017416 Solanum tuberosum HOM05D000092 ORTHO05D000042 3.1e-33 146.0 189 45.0
Sopen02g011670 Solanum pennellii HOM05D000092 ORTHO05D000042 4.5e-32 142.1 202 41.1
Peaxi162Scf00739g00123 Petunia axillaris HOM05D000092 ORTHO05D000042 5.9e-32 141.7 195 42.6
Solyc04g005550.2 Solanum lycopersicum HOM05D000092 ORTHO05D000042 3.8e-31 139.0 187 42.2
PGSC0003DMG400028057 Solanum tuberosum HOM05D000092 ORTHO05D000042 6.5e-31 138.3 146 52.1
Solyc04g057850.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.9e-30 136.7 189 45.0
CAN.G1161.10 Capsicum annuum HOM05D000092 ORTHO05D000042 4.2e-30 135.6 194 41.8
Peaxi162Scf00003g04724 Petunia axillaris HOM05D000092 ORTHO05D000042 9.4e-30 134.4 206 40.3
Peaxi162Scf00003g04738 Petunia axillaris HOM05D000092 ORTHO05D000042 6.1e-29 131.7 197 41.1
CAN.G960.38 Capsicum annuum HOM05D000092 ORTHO05D000042 3.0e-28 129.4 167 45.5
CAN.G641.10 Capsicum annuum HOM05D000092 ORTHO05D000042 6.7e-28 128.3 178 43.3
Peaxi162Scf00007g00431 Petunia axillaris HOM05D000092 ORTHO05D000042 5.7e-27 125.2 209 38.8
CAN.G1161.51 Capsicum annuum HOM05D000092 ORTHO05D000042 7.4e-27 124.8 177 41.2
CAN.G960.2 Capsicum annuum HOM05D000092 ORTHO05D000042 1.3e-26 124.0 167 46.1
Peaxi162Scf00253g00314 Petunia axillaris HOM05D000092 ORTHO05D000042 2.8e-26 122.9 140 46.4
CAN.G1161.58 Capsicum annuum HOM05D000092 ORTHO05D000042 2.4e-25 119.8 174 42.0
CAN.G960.21 Capsicum annuum HOM05D000092 ORTHO05D000042 2.4e-25 119.8 145 49.7
Sopen00g006780 Solanum pennellii HOM05D000092 ORTHO05D000042 3.1e-25 119.4 77 83.1
Nitab4.5_0000358g0090 Nicotiana tabacum HOM05D000092 ORTHO05D000042 1.2e-24 117.5 204 39.7
CAN.G641.7 Capsicum annuum HOM05D000092 ORTHO05D000042 4.5e-24 115.5 152 44.1
CAN.G641.2 Capsicum annuum HOM05D000092 ORTHO05D000042 2.2e-23 113.2 178 40.4
Peaxi162Scf00000g00843 Petunia axillaris HOM05D000092 ORTHO05D001673 2.2e-18 96.7 211 36.0
PGSC0003DMG402003025 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.2e-18 96.7 147 39.5
CAN.G1161.12 Capsicum annuum HOM05D000092 ORTHO05D000042 2.8e-18 96.3 107 49.5
Solyc02g036270.4 Solanum lycopersicum HOM05D000092 ORTHO05D000042 3.8e-15 85.9 89 50.6
Solyc02g036280.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.9e-14 83.6 67 58.2
Peaxi162Scf00003g00479 Petunia axillaris HOM05D000092 ORTHO05D000042 2.5e-14 83.2 161 35.4
PGSC0003DMG400010953 Solanum tuberosum HOM05D000092 ORTHO05D000042 4.2e-14 82.4 174 35.6
CAN.G385.6 Capsicum annuum HOM05D000092 ORTHO05D000042 3.0e-12 76.3 78 50.0
Sopen10g024940 Solanum pennellii HOM05D000092 ORTHO05D000042 4.8e-10 68.9 203 33.0
Solyc10g055120.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.2e-08 64.3 303 28.4
Sopen10g024970 Solanum pennellii HOM05D000092 ORTHO05D000042 2.6e-08 63.2 199 33.2
PGSC0003DMG400028081 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.0e-07 61.2 97 40.2
CAN.G1161.53 Capsicum annuum HOM05D000092 ORTHO05D000042 2.9e-07 59.7 112 38.4
Sopen04g018240 Solanum pennellii HOM05D000092 ORTHO05D000042 3.8e-07 59.3 57 56.1
CAN.G379.26 Capsicum annuum HOM05D000092 ORTHO05D000042 5.5e-06 55.5 75 41.3
CSS0022334 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 7.2e-06 55.1 135 28.1


User provided reference genes

Program Settings