Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g008330.4 Solanum lycopersicum HOM05D008409 ORTHO05D010483 4.8e-85 317.8 158 100.0
Sopen10g004190 Solanum pennellii HOM05D008409 ORTHO05D010483 4.1e-76 288.1 150 95.3
PGSC0003DMG400013143 Solanum tuberosum HOM05D008409 ORTHO05D010483 1.4e-68 263.1 150 87.3
CAN.G578.4 Capsicum annuum HOM05D008409 ORTHO05D010483 7.7e-59 230.7 143 81.1
Peaxi162Scf00059g01918 Petunia axillaris HOM05D008409 ORTHO05D010483 4.2e-57 224.9 145 75.9
Haze_13167 Corylus avellana HOM05D008409 ORTHO05D010483 3.1e-52 208.8 148 68.2
QL08p038864 Quercus lobata HOM05D008409 ORTHO05D010483 7.0e-52 207.6 148 68.9
CiPaw.04G126300 Carya illinoinensis HOM05D008409 ORTHO05D010483 9.1e-52 207.2 148 66.9
MELO3C018733.2 Cucumis melo HOM05D008409 ORTHO05D010483 3.5e-51 205.3 146 63.7
Nitab4.5_0009473g0020 Nicotiana tabacum HOM05D008409 ORTHO05D010483 5.9e-51 204.5 152 70.4
GSVIVG01020550001 Vitis vinifera HOM05D008409 ORTHO05D010483 1.0e-50 203.8 148 66.9
ClCG07G002880 Citrullus lanatus HOM05D008409 ORTHO05D010483 1.3e-50 203.4 146 64.4
Thecc.02G180200 Theobroma cacao HOM05D008409 ORTHO05D010483 1.7e-50 203.0 145 68.3
PGR142G1945 Punica granatum HOM05D008409 ORTHO05D010483 2.2e-50 202.6 146 65.1
Potri.013G131000 Populus trichocarpa HOM05D008409 ORTHO05D010483 3.8e-50 201.8 148 65.5
Sed0018099 Sechium edule HOM05D008409 ORTHO05D010483 3.8e-50 201.8 146 63.0
CsaV3_7G004460 Cucumis sativus L. HOM05D008409 ORTHO05D010483 5.0e-50 201.4 146 63.0
Sabra13G0110600 Salix brachista HOM05D008409 ORTHO05D010483 1.9e-49 199.5 154 63.0
Manes.12G089218 Manihot esculenta HOM05D008409 ORTHO05D010483 1.2e-48 196.8 145 64.1
TAR627G0101 Trochodendron aralioides HOM05D008409 ORTHO05D010483 1.2e-48 196.8 145 65.5
Nn1g06548 Nelumbo nucifera HOM05D008409 ORTHO05D010483 1.6e-48 196.4 146 63.7
Actinidia11031 Actinidia chinensis HOM05D008409 ORTHO05D010483 2.7e-48 195.7 146 64.4
Atru.chr6.2992 Acer truncatum HOM05D008409 ORTHO05D010483 1.4e-47 193.4 146 63.7
Aqoxy1G02429 Aquilegia oxysepala HOM05D008409 ORTHO05D010483 1.4e-47 193.4 149 63.1
MD09G1247200 Malus domestica HOM05D008409 ORTHO05D010483 1.4e-47 193.4 149 63.1
Gorai.012G128600 Gossypium raimondii HOM05D008409 ORTHO05D010483 1.8e-47 193.0 146 62.3
Ciclev10017070m.g Citrus clementina HOM05D008409 ORTHO05D010483 3.0e-47 192.2 146 64.4
Gohir.A04G103600 Gossypium hirsutum HOM05D008409 ORTHO05D010483 6.8e-47 191.0 146 61.6
Gohir.D04G143000 Gossypium hirsutum HOM05D008409 ORTHO05D010483 4.4e-46 188.3 146 61.6
PSO675G8696 Papaver somniferum HOM05D008409 ORTHO05D010483 2.2e-45 186.0 146 64.4
PSO541G0816 Papaver somniferum HOM05D008409 ORTHO05D010483 1.8e-44 183.0 146 63.0
Os08g0374000 Oryza sativa ssp. japonica HOM05D008409 ORTHO05D010483 9.1e-44 180.6 145 58.6
COL.COLO4_30195 Corchorus olitorius HOM05D008409 ORTHO05D010483 5.9e-43 177.9 134 63.4
TWI36G0630 Tripterygium wilfordii HOM05D008409 ORTHO05D010483 2.9e-42 175.6 147 56.5
ATR0737G133 Amborella trichopoda HOM05D008409 ORTHO05D010483 3.2e-41 172.2 144 56.9
MBI06_g04179_MAGBIO Magnolia biondii HOM05D008409 ORTHO05D010483 4.2e-41 171.8 149 58.4
CSS0031688 Camellia sinensis var. sinensis HOM05D008409 ORTHO05D010483 1.2e-38 163.7 142 61.3
SEGI_00232 Sequoiadendron giganteum HOM05D008409 ORTHO05D010483 1.6e-35 153.3 149 49.0
Dinv23634 Davidia involucrata HOM05D008409 ORTHO05D010483 1.7e-34 149.8 101 72.3
vmacro12306 Vaccinium macrocarpon HOM05D008409 ORTHO05D010483 1.2e-32 143.7 112 61.6
QL08p038938 Quercus lobata HOM05D008409 ORTHO05D010483 1.6e-24 116.7 91 62.6
Migut.L01436 Erythranthe guttata HOM05D000197 ORTHO05D000114 3.0e-10 69.3 147 31.3
vmacro16271 Vaccinium macrocarpon HOM05D000197 ORTHO05D000114 1.1e-09 67.4 150 29.3
ECA246G2358 Erigeron canadensis HOM05D000197 ORTHO05D000114 1.5e-09 67.0 157 28.0
HPP92_015289 Vanilla planifolia HOM05D000197 ORTHO05D000114 1.5e-09 67.0 139 30.2
HPP92_010019 Vanilla planifolia HOM05D000197 ORTHO05D000114 1.9e-09 66.6 139 30.2
Glyma.02G032300 Glycine max HOM05D000197 ORTHO05D000114 2.5e-09 66.2 146 32.2
Lj2g0009876 Lotus japonicus HOM05D000197 ORTHO05D000114 2.5e-09 66.2 150 32.7
Glyma.01G034000 Glycine max HOM05D000197 ORTHO05D000114 3.3e-09 65.9 146 31.5
Ciclev10032973m.g Citrus clementina HOM05D000197 ORTHO05D000114 4.3e-09 65.5 150 30.0
Manes.05G090000 Manihot esculenta HOM05D000197 ORTHO05D000114 4.3e-09 65.5 146 28.1
Lsat_1_v5_gn_3_48941 Lactuca sativa HOM05D000197 ORTHO05D000114 5.6e-09 65.1 146 29.5
vmacro16272 Vaccinium macrocarpon HOM05D000197 ORTHO05D000114 1.2e-08 63.9 144 31.2
Mapoly0131s0015 Marchantia polymorpha HOM05D012277 ORTHO05D000114 1.6e-08 63.5 137 31.4
Pp3c13_23010 Physcomitrium patens HOM05D012277 ORTHO05D010483 1.6e-08 63.5 135 31.1
Pp3c13_23030 Physcomitrium patens HOM05D012277 ORTHO05D010483 1.6e-08 63.5 135 31.1
Nn4g22865 Nelumbo nucifera HOM05D000197 ORTHO05D000114 2.1e-08 63.2 140 27.1
Lsat_1_v5_gn_5_100541 Lactuca sativa HOM05D000197 ORTHO05D000114 3.6e-08 62.4 139 28.8
Lj6C802G2 Lonicera japonica HOM05D000197 ORTHO05D000114 3.6e-08 62.4 140 30.0
CSS0039522 Camellia sinensis var. sinensis HOM05D000197 ORTHO05D000114 6.2e-08 61.6 148 29.1
FAN07G2092 Fragaria x ananassa HOM05D000197 ORTHO05D000114 6.2e-08 61.6 148 29.1
MD13G1088200 Malus domestica HOM05D000197 ORTHO05D000114 6.2e-08 61.6 151 26.5
PGR119G0429 Punica granatum HOM05D000197 ORTHO05D000114 8.1e-08 61.2 130 26.2
Lsat_1_v5_gn_5_100601 Lactuca sativa HOM05D000197 ORTHO05D000114 1.1e-07 60.8 139 27.3
unitig_22.g6474 Utricularia gibba HOM05D000197 ORTHO05D000114 1.1e-07 60.8 146 28.8
MSTRG.2155 Avicennia marina HOM05D000197 ORTHO05D000114 1.4e-07 60.5 118 31.4
FvH4_4g34890 Fragaria vesca HOM05D000197 ORTHO05D000114 1.4e-07 60.5 148 28.4
FAN12G1601 Fragaria x ananassa HOM05D000197 ORTHO05D000114 1.4e-07 60.5 148 28.4
FAN17G2379 Fragaria x ananassa HOM05D000197 ORTHO05D000114 1.4e-07 60.5 148 28.4
HanXRQChr17g0563811 Helianthus annuus HOM05D000197 ORTHO05D000114 1.4e-07 60.5 146 26.7
HanXRQChr11g0351041 Helianthus annuus HOM05D000197 ORTHO05D000114 1.8e-07 60.1 146 26.7
Pp3c8_12660 Physcomitrium patens HOM05D008409 ORTHO05D010483 2.3e-07 59.7 118 28.0
RcHm_v2.0_Chr4g0444321 Rosa chinensis HOM05D000197 ORTHO05D000114 2.3e-07 59.7 148 29.1
Mapoly0131s0013 Marchantia polymorpha HOM05D008409 ORTHO05D010483 3.1e-07 59.3 138 30.4
Haze_10961 Corylus avellana HOM05D000197 ORTHO05D000114 5.2e-07 58.5 148 28.4
CsaV3_5G031770 Cucumis sativus L. HOM05D000197 ORTHO05D000114 5.2e-07 58.5 145 30.3
Manes.15G130000 Manihot esculenta HOM05D000197 ORTHO05D000114 5.2e-07 58.5 153 28.1
Pp3c7_19830 Physcomitrium patens HOM05D012277 ORTHO05D010483 6.8e-07 58.2 136 27.9
Pp3c7_19850 Physcomitrium patens HOM05D012277 ORTHO05D010483 6.8e-07 58.2 136 27.9
SMO347G0071 Selaginella moellendorffii HOM05D008409 ORTHO05D010483 1.5e-06 57.0 152 27.6
Dinv18606 Davidia involucrata HOM05D000197 ORTHO05D000114 2.0e-06 56.6 118 30.5
Dinv26222 Davidia involucrata HOM05D000197 ORTHO05D000114 2.0e-06 56.6 118 30.5
Migut.E00440 Erythranthe guttata HOM05D000197 ORTHO05D000114 2.0e-06 56.6 131 25.2
Oeu062656.1 Olea europaea HOM05D000197 ORTHO05D000114 2.0e-06 56.6 132 24.2
Peaxi162Scf00815g00012 Petunia axillaris HOM05D000197 ORTHO05D000114 2.0e-06 56.6 142 26.1
GSVIVG01011726001 Vitis vinifera HOM05D000197 ORTHO05D000114 2.0e-06 56.6 140 30.0
Actinidia12371 Actinidia chinensis HOM05D000197 ORTHO05D000114 4.4e-06 55.5 152 27.6
Os04g0465600 Oryza sativa ssp. japonica HOM05D000197 ORTHO05D000114 4.4e-06 55.5 146 24.7
GSVIVG01011730001 Vitis vinifera HOM05D000197 ORTHO05D000114 5.8e-06 55.1 90 36.7
CiPaw.06G046600 Carya illinoinensis HOM05D000197 ORTHO05D000114 9.9e-06 54.3 140 27.1
Dinv14414 Davidia involucrata HOM05D000197 ORTHO05D000114 9.9e-06 54.3 132 27.3
Hund01084 Selenicereus undatus HOM05D008409 ORTHO05D010483 9.9e-06 54.3 41 61.0


User provided reference genes

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