Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g074690.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 2.5e-170 602.1 309 100.0
Sopen09g029570 Solanum pennellii HOM05D002567 ORTHO05D006538 1.1e-154 550.1 285 98.9
Sopen09g029590 Solanum pennellii HOM05D002567 ORTHO05D006538 1.9e-141 506.1 287 89.9
CAN.G1562.7 Capsicum annuum HOM05D002567 ORTHO05D006538 1.2e-127 460.3 286 83.9
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 4.3e-122 441.8 270 83.7
Solyc09g074730.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 9.6e-122 440.7 234 94.9
Peaxi162Scf00067g01812 Petunia axillaris HOM05D002567 ORTHO05D006538 1.3e-118 430.3 313 74.1
Dinv19733 Davidia involucrata HOM05D002567 ORTHO05D006538 1.2e-108 397.1 287 71.4
Dinv33021 Davidia involucrata HOM05D002567 ORTHO05D006538 3.5e-108 395.6 288 70.8
QL12p030584 Quercus lobata HOM05D002567 ORTHO05D006538 4.5e-103 378.6 282 69.9
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 1.4e-101 373.6 287 67.2
Cc01_g20510 Coffea canephora HOM05D002567 ORTHO05D006538 3.2e-101 372.5 286 67.8
CiPaw.07G103600 Carya illinoinensis HOM05D002567 ORTHO05D006538 4.2e-101 372.1 283 68.9
Duzib138G0932 Durio zibethinus HOM05D002567 ORTHO05D006538 5.5e-101 371.7 287 66.2
Lsat_1_v5_gn_8_54500 Lactuca sativa HOM05D002567 ORTHO05D006538 5.5e-101 371.7 284 69.0
Prupe.8G255600 Prunus persica HOM05D002567 ORTHO05D006538 7.1e-101 371.3 287 66.6
Thecc.01G293900 Theobroma cacao HOM05D002567 ORTHO05D006538 7.1e-101 371.3 287 66.9
DCAR_018344 Daucus carota HOM05D002567 ORTHO05D006538 2.1e-100 369.8 285 68.8
Lj2C1188T12 Lonicera japonica HOM05D002567 ORTHO05D006538 2.1e-100 369.8 288 68.8
Gorai.004G088100 Gossypium raimondii HOM05D002567 ORTHO05D006538 2.7e-100 369.4 287 67.2
ECA236G0908 Erigeron canadensis HOM05D002567 ORTHO05D006538 3.9e-99 365.5 291 65.6
Gohir.D08G083700 Gossypium hirsutum HOM05D002567 ORTHO05D006538 6.7e-99 364.8 287 66.6
Gohir.A08G074400 Gossypium hirsutum HOM05D002567 ORTHO05D006538 2.5e-98 362.8 287 66.2
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 5.7e-98 361.7 305 64.6
Hund18109 Selenicereus undatus HOM05D002567 ORTHO05D006538 7.4e-98 361.3 284 65.8
HanXRQChr04g0118111 Helianthus annuus HOM05D002567 ORTHO05D006538 1.6e-97 360.1 284 66.9
PGR119G0460 Punica granatum HOM05D002567 ORTHO05D006538 3.7e-97 359.0 286 64.3
GSVIVG01010967001 Vitis vinifera HOM05D002567 ORTHO05D006538 1.8e-96 356.7 292 64.0
MD03G1284300 Malus domestica HOM05D002567 ORTHO05D006538 3.1e-96 355.9 288 64.6
EL10Ac7g17517 Beta vulgaris HOM05D002567 ORTHO05D006538 9.0e-96 354.4 272 65.8
Nn5g30059 Nelumbo nucifera HOM05D002567 ORTHO05D006538 4.5e-95 352.1 283 64.3
Sc17g0003440 Simmondsia chinensis HOM05D002567 ORTHO05D006538 2.9e-94 349.4 281 63.3
CANSAT25G2282 Cannabis sativa HOM05D002567 ORTHO05D006538 5.0e-94 348.6 286 61.2
MD11G1302000 Malus domestica HOM05D002567 ORTHO05D006538 5.0e-94 348.6 283 65.0
Nn3g21405 Nelumbo nucifera HOM05D002567 ORTHO05D006538 8.4e-94 347.8 272 65.4
Cpa.g.sc9.189 Carica papaya HOM05D002567 ORTHO05D006538 1.1e-93 347.4 299 63.5
TAR633G1653 Trochodendron aralioides HOM05D002567 ORTHO05D006538 4.2e-93 345.5 283 64.3
MBI19_g12821_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 1.2e-92 344.0 280 64.3
AUR62033197 Chenopodium quinoa HOM05D002567 ORTHO05D006538 2.7e-92 342.8 267 65.9
arahy.Tifrunner.gnm1.ann1.8D3299 Arachis hypogaea HOM05D002567 ORTHO05D006538 4.6e-92 342.0 281 66.2
arahy.Tifrunner.gnm1.ann1.B3NEVG Arachis hypogaea HOM05D002567 ORTHO05D006538 4.6e-92 342.0 281 66.2
Glyma.03G211500 Glycine max HOM05D002567 ORTHO05D006538 4.6e-92 342.0 286 65.4
Lalb_Chr15g0078671 Lupinus albus HOM05D002567 ORTHO05D006538 4.6e-92 342.0 282 64.9
TWI14G0289 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 7.9e-92 341.3 288 61.1
TAR362G0158 Trochodendron aralioides HOM05D002567 ORTHO05D006538 7.9e-92 341.3 285 63.2
ClCG09G006200 Citrullus lanatus HOM05D002567 ORTHO05D006538 1.8e-91 340.1 336 55.4
Glyma.19G208700 Glycine max HOM05D002567 ORTHO05D006538 1.8e-91 340.1 281 66.2
Ciclev10018617m.g Citrus clementina HOM05D002567 ORTHO05D006538 8.7e-91 337.8 311 58.5
MELO3C016045.2 Cucumis melo HOM05D002567 ORTHO05D006538 1.1e-90 337.4 305 59.0
Lj1g0027200 Lotus japonicus HOM05D002567 ORTHO05D006538 1.5e-90 337.0 282 64.2
CsaV3_7G028930 Cucumis sativus L. HOM05D002567 ORTHO05D006538 2.5e-90 336.3 314 57.6
Medtr7g108390 Medicago truncatula HOM05D002567 ORTHO05D006538 1.6e-89 333.6 276 64.9
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 1.6e-89 333.6 209 81.8
RcHm_v2.0_Chr6g0293161 Rosa chinensis HOM05D002567 ORTHO05D006538 1.6e-89 333.6 295 61.4
Lalb_Chr18g0047271 Lupinus albus HOM05D002567 ORTHO05D006538 2.2e-89 333.2 288 63.2
TWI59G0117 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 2.2e-89 333.2 288 60.4
Oeu046708.2 Olea europaea HOM05D002567 ORTHO05D006538 2.8e-89 332.8 286 62.6
SGA_v2.0_scaffold2G01415 Striga asiatica HOM05D001550 ORTHO05D006538 2.8e-89 332.8 281 61.9
Phvul.001G204600 Phaseolus vulgaris HOM05D002567 ORTHO05D006538 1.4e-88 330.5 285 62.1
Atru.chr5.1232 Acer truncatum HOM05D002567 ORTHO05D006538 3.1e-88 329.3 319 57.4
Actinidia28538 Actinidia chinensis HOM05D002567 ORTHO05D006538 5.3e-88 328.6 330 56.7
VMungo1383G1965 Vigna mungo HOM05D002567 ORTHO05D006538 5.3e-88 328.6 272 64.7
AL6G50490 Arabidopsis lyrata HOM05D002567 ORTHO05D006538 2.6e-87 326.2 288 60.1
THA.LOC104815934 Tarenaya hassleriana HOM05D002567 ORTHO05D006538 3.4e-87 325.9 300 59.0
AT4G02560 Arabidopsis thaliana HOM05D002567 ORTHO05D006538 4.5e-87 325.5 288 59.4
Sp6g02470 Schrenkiella parvula HOM05D002567 ORTHO05D006538 1.3e-86 323.9 288 59.7
Ca_09134_v3 Cicer arietinum L. HOM05D002567 ORTHO05D006538 2.9e-86 322.8 281 62.3
Sed0021907 Sechium edule HOM05D002567 ORTHO05D006538 2.9e-86 322.8 322 54.7
CARHR250850 Cardamine hirsuta HOM05D002567 ORTHO05D006538 3.8e-86 322.4 289 59.5
Aqoxy5G00702 Aquilegia oxysepala HOM05D002567 ORTHO05D006538 5.0e-86 322.0 308 56.5
FvH4_2g25100 Fragaria vesca HOM05D002567 ORTHO05D006538 1.1e-85 320.9 339 52.8
FAN24G0094 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.1e-85 320.9 339 52.8
BcaB05g23644 Brassica carinata HOM05D002567 ORTHO05D006538 1.4e-85 320.5 293 59.0
Carub.0006s3458 Capsella rubella HOM05D002567 ORTHO05D006538 7.2e-85 318.2 288 57.3
CDE11G0231 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 7.2e-85 318.2 268 61.9
Migut.D00183 Erythranthe guttata HOM05D002567 ORTHO05D006538 9.4e-85 317.8 277 61.7
Potri.002G209216 Populus trichocarpa HOM05D002567 ORTHO05D006538 9.4e-85 317.8 388 48.2
ATR0706G272 Amborella trichopoda HOM05D002567 ORTHO05D006538 1.6e-84 317.0 280 60.4
FAN20G1419 Fragaria x ananassa HOM05D002567 ORTHO05D006538 3.6e-84 315.8 337 52.8
A02p24870 Brassica napus HOM05D002567 ORTHO05D006538 4.6e-84 315.5 293 58.0
C02p39290 Brassica napus HOM05D002567 ORTHO05D006538 4.6e-84 315.5 293 58.0
BolC2t09940H Brassica oleracea HOM05D002567 ORTHO05D006538 4.6e-84 315.5 293 58.0
BraA02t07474Z Brassica rapa HOM05D002567 ORTHO05D006538 4.6e-84 315.5 293 58.0
BcaC03g16147 Brassica carinata HOM05D002567 ORTHO05D006538 2.3e-83 313.2 293 58.0
FAN15G0803 Fragaria x ananassa HOM05D002567 ORTHO05D006538 5.1e-83 312.0 334 53.6
Sabra02G0150900 Salix brachista HOM05D002567 ORTHO05D006538 8.8e-83 311.2 388 47.2
TPR.G9283 Trifolium pratense HOM05D002567 ORTHO05D006538 8.8e-83 311.2 313 55.6
MBI19_g13122_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 5.7e-82 308.5 280 60.7
FAN27G3038 Fragaria x ananassa HOM05D002567 ORTHO05D006538 3.7e-81 305.8 334 52.4
PSO210G0804 Papaver somniferum HOM05D002567 ORTHO05D006538 4.8e-81 305.4 356 49.4
HPP92_025217 Vanilla planifolia HOM05D002567 ORTHO05D006538 8.2e-81 304.7 315 53.7
PSO832G4557 Papaver somniferum HOM05D002567 ORTHO05D006538 1.4e-80 303.9 356 49.4
AUR62043270 Chenopodium quinoa HOM05D002567 ORTHO05D006538 4.5e-79 298.9 267 58.4
Potri.014G132800 Populus trichocarpa HOM05D002567 ORTHO05D006538 6.5e-78 295.0 387 45.7
arahy.Tifrunner.gnm1.ann1.VDB3CB Arachis hypogaea HOM05D001550 ORTHO05D001611 8.5e-78 294.7 252 64.3
Aa31LG5G2190 Aethionema arabicum HOM05D002567 ORTHO05D006538 1.6e-76 290.4 328 50.9
Thhalv10028403m.g Eutrema salsugineum HOM05D002567 ORTHO05D006538 4.7e-76 288.9 281 56.6
Rhsim13G0015100 Rhododendron simsii HOM05D002567 ORTHO05D006538 3.9e-75 285.8 324 51.5
vmacro02487 Vaccinium macrocarpon HOM05D002567 ORTHO05D006538 6.7e-75 285.0 319 51.7
SHI15302 Sapria himalayana HOM05D002567 ORTHO05D006538 3.7e-73 279.3 351 46.2
Os01g0934300 Oryza sativa ssp. japonica HOM05D002567 ORTHO05D006538 8.2e-73 278.1 323 49.8
Psat3g022840 Pisum sativum HOM05D002567 ORTHO05D006538 1.8e-64 250.4 208 63.5
CDE05G3083 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 7.0e-64 248.4 224 57.6
Sabra14G0099200 Salix brachista HOM05D002567 ORTHO05D006538 1.6e-63 247.3 394 41.1
Zm00001eb142180 Zea mays HOM05D002567 ORTHO05D006538 4.5e-63 245.7 344 44.8
Oeu011428.1 Olea europaea HOM05D002567 ORTHO05D006538 8.8e-51 204.9 145 68.3
unitig_26.g10168 Utricularia gibba HOM05D002567 ORTHO05D006538 2.8e-49 199.9 243 47.7
Eucgr.H01192 Eucalyptus grandis HOM05D002567 ORTHO05D006538 6.8e-43 178.7 147 66.7
Mapoly0032s0010 Marchantia polymorpha HOM05D002567 ORTHO05D006538 1.2e-39 167.9 274 40.1
Actinidia02761 Actinidia chinensis HOM05D002567 ORTHO05D006538 7.3e-37 158.7 137 56.9
Pp3c7_5840 Physcomitrium patens HOM05D002567 ORTHO05D006538 2.0e-34 150.6 265 34.7
Eucgr.H01191 Eucalyptus grandis HOM05D002567 ORTHO05D006538 3.5e-31 139.8 91 71.4
SMO119G0396 Selaginella moellendorffii HOM05D002567 ORTHO05D006538 1.7e-25 120.9 220 34.1
CBR_g48346 Chara braunii HOM05D002567 ORTHO05D006538 2.5e-21 107.1 279 30.8
MBI01_g23938_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 5.2e-19 99.4 79 55.7
MBI02_g41934_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 1.3e-17 94.7 76 68.4
MBI05_g31851_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 4.9e-17 92.8 86 50.0
Actinidia02760 Actinidia chinensis HOM05D002567 ORTHO05D006538 8.4e-17 92.0 70 68.6
Actinidia32248 Actinidia chinensis HOM05D002567 ORTHO05D006538 2.1e-07 60.8 59 59.3


User provided reference genes

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