Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g071220.1 Solanum lycopersicum HOM05D009197 ORTHO05D010857 2.9e-70 268.5 136 100.0
Sopen06g027530 Solanum pennellii HOM05D009197 ORTHO05D010857 2.1e-68 262.3 136 97.1
CAN.G628.60 Capsicum annuum HOM05D009197 ORTHO05D010857 9.2e-61 236.9 135 88.1
PGSC0003DMG400033096 Solanum tuberosum HOM05D009197 ORTHO05D010857 1.5e-55 219.5 123 91.9
Nitab4.5_0000003g0200 Nicotiana tabacum HOM05D009197 ORTHO05D010857 5.3e-48 194.5 140 74.3
Nitab4.5_0000758g0060 Nicotiana tabacum HOM05D009197 ORTHO05D010857 1.2e-47 193.4 140 72.9
Peaxi162Scf00689g00559 Petunia axillaris HOM05D000207 ORTHO05D002370 2.1e-41 172.6 138 64.5
Actinidia04946 Actinidia chinensis HOM05D004313 ORTHO05D005036 3.4e-31 138.7 139 52.5
CSS0015959 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 7.1e-29 131.0 137 52.6
Potri.012G073800 Populus trichocarpa HOM05D009197 ORTHO05D010857 6.9e-24 114.4 138 46.4
Sabra15G0093200 Salix brachista HOM05D009197 ORTHO05D010857 2.0e-23 112.8 144 47.2
Potri.015G068800 Populus trichocarpa HOM05D009197 ORTHO05D010857 2.6e-23 112.5 141 44.7
Dinv07989 Davidia involucrata HOM05D009197 ORTHO05D010857 8.5e-22 107.5 122 54.9
Atru.chr9.2375 Acer truncatum HOM05D009197 ORTHO05D010857 1.4e-21 106.7 134 46.3
Manes.14G072000 Manihot esculenta HOM05D009197 ORTHO05D010857 5.5e-21 104.8 145 47.6
CSS0023152 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 6.1e-20 101.3 130 46.2
Thecc.03G071400 Theobroma cacao HOM05D009197 ORTHO05D010857 7.9e-20 100.9 134 44.0
Gohir.D11G031200 Gossypium hirsutum HOM05D009197 ORTHO05D010857 1.0e-19 100.5 132 43.9
Gorai.007G034100 Gossypium raimondii HOM05D009197 ORTHO05D010857 1.4e-19 100.1 132 43.9
Gohir.A11G028000 Gossypium hirsutum HOM05D009197 ORTHO05D010857 5.1e-19 98.2 132 44.7
Aqoxy3G03174 Aquilegia oxysepala HOM05D009197 ORTHO05D010857 3.3e-18 95.5 139 41.7
Ciclev10022789m.g Citrus clementina HOM05D009197 ORTHO05D010857 3.3e-18 95.5 137 41.6
Rhsim08G0163700 Rhododendron simsii HOM05D009197 ORTHO05D010857 3.3e-18 95.5 126 47.6
Haze_07407 Corylus avellana HOM05D009197 ORTHO05D010857 1.5e-15 86.7 137 41.6
Haze_07415 Corylus avellana HOM05D000207 ORTHO05D002370 1.5e-15 86.7 137 41.6
ECA246G1381 Erigeron canadensis HOM05D009197 ORTHO05D010857 3.4e-15 85.5 123 39.0
COL.COLO4_07631 Corchorus olitorius HOM05D009197 ORTHO05D010857 4.5e-15 85.1 135 38.5
QL03p067559 Quercus lobata HOM05D009197 ORTHO05D010857 6.5e-14 81.3 109 39.4
QL10p013987 Quercus lobata HOM05D009197 ORTHO05D010857 8.5e-14 80.9 108 42.6
Cfa019040 Carpinus fangiana HOM05D009197 ORTHO05D010857 1.9e-13 79.7 125 44.0
QL03p067585 Quercus lobata HOM05D009197 ORTHO05D010857 4.7e-12 75.1 109 42.2
TAR371G0864 Trochodendron aralioides HOM05D009197 ORTHO05D010857 1.0e-11 73.9 140 35.7
Lj4g0014795 Lotus japonicus HOM05D013104 ORTHO05D010857 1.8e-11 73.2 128 39.8
TPR.G38456 Trifolium pratense HOM05D013104 ORTHO05D010857 6.7e-11 71.2 132 40.2
Gohir.D03G089850 Gossypium hirsutum HOM05D009197 ORTHO05D010857 1.1e-10 70.5 131 41.2
Sc04g0008740 Simmondsia chinensis HOM05D017674 ORTHO05D019531 9.7e-10 67.4 175 32.6
Medtr4g107270 Medicago truncatula HOM05D013104 ORTHO05D010857 2.2e-09 66.2 131 38.9
Phvul.003G195600 Phaseolus vulgaris HOM05D013104 ORTHO05D010857 3.7e-09 65.5 125 36.0
Nn4g22968 Nelumbo nucifera HOM05D009197 ORTHO05D010857 6.3e-09 64.7 137 37.2
Psat4g054920 Pisum sativum HOM05D013104 ORTHO05D010857 8.2e-09 64.3 134 37.3
Glyma.17G094600 Glycine max HOM05D013104 ORTHO05D010857 5.3e-08 61.6 125 39.2
Glyma.05G032100 Glycine max HOM05D013104 ORTHO05D010857 9.1e-08 60.8 125 37.6
Sed0012922 Sechium edule HOM05D022550 ORTHO05D025091 1.5e-07 60.1 131 37.4
Migut.E00128 Erythranthe guttata HOM05D041172 ORTHO05D035185 2.6e-07 59.3 127 36.2
MELO3C002227.2 Cucumis melo HOM05D022550 ORTHO05D025091 7.7e-07 57.8 141 38.3
Hund05938 Selenicereus undatus HOM05D017674 ORTHO05D019531 1.3e-06 57.0 168 32.1
arahy.Tifrunner.gnm1.ann1.ABZM2I Arachis hypogaea HOM05D013104 ORTHO05D010857 1.7e-06 56.6 151 33.1
ClCG01G014220 Citrullus lanatus HOM05D022550 ORTHO05D025091 8.5e-06 54.3 141 33.3


User provided reference genes

Program Settings