Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 0.0e+00 1146.0 613 100.0
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 0.0e+00 1121.3 613 96.4
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 6.3e-311 1070.1 617 92.1
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 1.0e-279 966.5 622 85.0
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 3.6e-245 851.7 612 77.8
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 7.7e-232 807.4 543 83.6
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 8.0e-229 797.3 460 90.0
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 4.4e-203 711.8 645 63.3
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 1.1e-201 707.2 632 62.2
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 9.9e-195 684.1 594 64.0
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 8.4e-194 681.0 573 65.6
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 1.9e-193 679.9 627 60.4
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 1.4e-188 663.7 537 66.5
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 8.9e-188 661.0 605 62.5
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 2.0e-187 659.8 639 59.6
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 3.4e-187 659.1 614 60.1
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 5.8e-187 658.3 547 66.2
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 6.4e-186 654.8 572 62.2
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 1.9e-185 653.3 555 64.0
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 5.4e-185 651.7 560 63.6
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 3.0e-183 646.0 580 61.6
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 3.0e-183 646.0 580 61.6
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 6.6e-183 644.8 588 61.2
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 2.5e-182 642.9 628 57.6
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 4.3e-182 642.1 535 63.6
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 1.4e-180 637.1 573 61.8
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 4.0e-180 635.6 574 62.5
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 6.9e-180 634.8 712 54.4
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 6.9e-180 634.8 560 63.9
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 9.0e-180 634.4 640 58.9
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 4.4e-179 632.1 544 62.5
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 4.9e-178 628.6 616 58.0
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 4.9e-178 628.6 638 59.4
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 1.1e-177 627.5 614 57.7
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 1.9e-177 626.7 569 60.8
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 3.2e-177 625.9 663 55.2
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 1.6e-176 623.6 659 56.6
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 7.9e-176 621.3 613 56.6
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 3.9e-175 619.0 532 61.1
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 1.5e-174 617.1 567 60.7
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 3.3e-174 615.9 593 58.5
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 5.6e-174 615.1 636 57.2
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 7.3e-174 614.8 556 60.3
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 1.3e-173 614.0 567 60.1
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 2.1e-173 613.2 567 60.5
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 3.6e-173 612.5 556 60.3
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 3.6e-173 612.5 569 60.1
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 3.6e-173 612.5 559 59.6
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 4.8e-173 612.1 623 56.3
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 8.1e-173 611.3 592 57.1
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 9.0e-172 607.8 643 56.1
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 1.5e-171 607.1 566 59.4
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 3.4e-171 605.9 568 60.0
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 4.5e-171 605.5 597 58.6
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 5.8e-171 605.1 568 59.9
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 7.6e-171 604.7 529 62.2
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 2.2e-170 603.2 590 58.8
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 2.9e-170 602.8 581 59.4
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 2.9e-170 602.8 557 59.4
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 4.9e-170 602.1 595 58.8
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 2.4e-169 599.7 583 58.8
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 2.7e-168 596.3 642 54.5
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 6.0e-168 595.1 638 56.0
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 1.5e-166 590.5 561 59.2
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 3.7e-165 585.9 523 60.4
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 1.1e-164 584.3 584 57.4
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 3.1e-164 582.8 613 56.1
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 9.0e-164 581.3 560 59.6
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 9.0e-164 581.3 573 58.6
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 5.8e-163 578.6 568 57.7
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 7.6e-163 578.2 628 55.3
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 1.7e-162 577.0 585 57.3
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 2.9e-162 576.2 541 59.0
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 2.9e-162 576.2 542 59.2
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 3.8e-162 575.9 547 58.7
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 2.3e-159 566.6 588 55.3
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 2.5e-158 563.1 660 50.9
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 2.1e-152 543.5 554 56.5
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 1.1e-150 537.7 558 56.1
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 8.2e-149 531.6 543 55.1
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.5e-147 527.3 563 56.7
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 1.3e-146 524.2 576 53.6
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 8.5e-138 495.0 553 54.1
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 2.2e-133 480.3 470 56.8
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 2.9e-122 443.4 566 47.5
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 2.1e-112 410.6 532 45.5
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 3.4e-110 403.3 465 53.5
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 4.9e-101 372.9 412 56.1
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 4.6e-99 366.3 408 55.4
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 2.5e-97 360.5 309 61.8
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 7.3e-97 359.0 461 50.3
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 3.6e-96 356.7 408 54.4
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 5.2e-95 352.8 466 49.6
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 3.7e-93 346.7 468 48.5
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 6.0e-83 312.8 443 45.6
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 1.7e-82 311.2 401 47.9
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 1.4e-71 275.0 570 35.8
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 1.8e-55 221.5 245 53.5
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 4.9e-45 186.8 188 56.4
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 2.7e-43 181.0 529 29.7
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 9.7e-33 146.0 247 38.9
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 6.3e-32 143.3 135 59.3
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 9.1e-31 139.4 139 56.1
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 8.5e-29 132.9 346 31.2
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 1.4e-26 125.6 116 61.2
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 1.8e-26 125.2 162 45.1
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 3.0e-26 124.4 98 68.4
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 8.8e-26 122.9 97 58.8
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 2.2e-21 108.2 82 67.1
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 4.7e-19 100.5 62 77.4
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 4.1e-15 87.4 89 58.4
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 1.3e-13 82.4 105 46.7
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 3.6e-11 74.3 184 29.9


User provided reference genes

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